RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 DSCR10P59022 87 aa4.69□□□□□ -1.66
TRBV28-201ENST00000390400 C9orf116Q5BN46 136 aaPredicted RBP4.69□□□□□ -1.66
TRBV28-201ENST00000390400 Q6ZRX8 168 aa4.69□□□□□ -1.66
TRBV28-201ENST00000390400 Q8N377 158 aa4.69□□□□□ -1.66
TRBV28-201ENST00000390400 DNAH10Q8IVF4 4471 aa4.68□□□□□ -1.66
TRBV28-201ENST00000390400 A0A1W2PNM2 257 aa4.68□□□□□ -1.66
TRBV28-201ENST00000390400 A8MUN3 132 aa4.68□□□□□ -1.66
TRBV28-201ENST00000390400 CAMK2N2Q96S95 79 aa4.68□□□□□ -1.66
TRBV28-201ENST00000390400 DNAH2Q9P225 4427 aa4.67□□□□□ -1.66
TRBV28-201ENST00000390400 DNAH17Q9UFH2 4485 aa4.67□□□□□ -1.66
TRBV28-201ENST00000390400 HECTD4Q9Y4D8 3996 aa4.67□□□□□ -1.66
TRBV28-201ENST00000390400 IGLV7-46A0A075B6I9 117 aa4.67□□□□□ -1.66
TRBV28-201ENST00000390400 A6NN06 94 aa4.67□□□□□ -1.66
TRBV28-201ENST00000390400 CHKB-CPT1BH3BT56 60 aa4.67□□□□□ -1.66
TRBV28-201ENST00000390400 PSPHP1O15172 72 aa4.67□□□□□ -1.66
TRBV28-201ENST00000390400 CNBPP62633 177 aaKnown RBP4.67□□□□□ -1.66
TRBV28-201ENST00000390400 Q8N9L7 120 aa4.67□□□□□ -1.66
TRBV28-201ENST00000390400 NKAPP1Q8N9T2 125 aa4.67□□□□□ -1.66
TRBV28-201ENST00000390400 RBM12B-AS1Q9P1G2 102 aa4.67□□□□□ -1.66
TRBV28-201ENST00000390400 LINC01558Q9Y6Z2 57 aa4.67□□□□□ -1.66
TRBV28-201ENST00000390400 C16orf90A8MZG2 172 aa4.66□□□□□ -1.66
TRBV28-201ENST00000390400 KRTAP4-16G5E9R7 235 aaPredicted RBP4.66□□□□□ -1.66
TRBV28-201ENST00000390400 LCA10Q71F78 164 aa4.66□□□□□ -1.66
TRBV28-201ENST00000390400 C9orf163Q8N9P6 203 aa4.66□□□□□ -1.66
TRBV28-201ENST00000390400 TP53AIP1Q9HCN2 124 aa4.66□□□□□ -1.66
TRBV28-201ENST00000390400 LCE1AQ5T7P2 110 aa4.65□□□□□ -1.67
TRBV28-201ENST00000390400 PLAC8Q9NZF1 115 aa4.65□□□□□ -1.67
TRBV28-201ENST00000390400 A0A1B0GVY2 172 aa4.64□□□□□ -1.67
TRBV28-201ENST00000390400 K7EQZ3 153 aa4.64□□□□□ -1.67
TRBV28-201ENST00000390400 KRTAP4-2Q9BYR5 136 aa4.63□□□□□ -1.67
TRBV28-201ENST00000390400 XAGE1AQ9HD64 81 aa4.63□□□□□ -1.67
TRBV28-201ENST00000390400 FAT2Q9NYQ8 4349 aa4.63□□□□□ -1.67
TRBV28-201ENST00000390400 RYR3Q15413 4870 aa4.62□□□□□ -1.67
TRBV28-201ENST00000390400 A6NED7 52 aa4.62□□□□□ -1.67
TRBV28-201ENST00000390400 H0Y9P7 68 aa4.62□□□□□ -1.67
TRBV28-201ENST00000390400 PRR15LQ9BU68 103 aa4.62□□□□□ -1.67
TRBV28-201ENST00000390400 IGLV1-50A0A075B6I6 118 aa4.61□□□□□ -1.67
TRBV28-201ENST00000390400 A8MWP4 228 aa4.6□□□□□ -1.67
TRBV28-201ENST00000390400 CASC2Q6XLA1 102 aa4.6□□□□□ -1.67
TRBV28-201ENST00000390400 COA5Q86WW8 74 aa4.6□□□□□ -1.67
TRBV28-201ENST00000390400 ST20-AS1Q8NBB2 130 aa4.6□□□□□ -1.67
TRBV28-201ENST00000390400 C7orf33Q8WU49 177 aa4.6□□□□□ -1.67
TRBV28-201ENST00000390400 A0A096LNI7 61 aa4.59□□□□□ -1.67
TRBV28-201ENST00000390400 IGKV2-24A0A0C4DH68 120 aa4.59□□□□□ -1.67
TRBV28-201ENST00000390400 KRTAP10-1P60331 282 aa4.59□□□□□ -1.67
TRBV28-201ENST00000390400 DNAH11Q96DT5 4516 aa4.58□□□□□ -1.68
TRBV28-201ENST00000390400 PKD1P98161 4303 aa4.58□□□□□ -1.68
TRBV28-201ENST00000390400 PKHD1P08F94 4074 aa4.58□□□□□ -1.68
TRBV28-201ENST00000390400 H0Y9J4 135 aa4.58□□□□□ -1.68
TRBV28-201ENST00000390400 CHTF8P0CG12 524 aa4.58□□□□□ -1.68
TRBV28-201ENST00000390400 SPRR1BP22528 89 aa4.58□□□□□ -1.68
TRBV28-201ENST00000390400 RPL37AP61513 92 aaKnown RBP4.58□□□□□ -1.68
TRBV28-201ENST00000390400 MOBPQ13875 183 aa4.58□□□□□ -1.68
TRBV28-201ENST00000390400 REG3GQ6UW15 175 aa4.58□□□□□ -1.68
TRBV28-201ENST00000390400 KRTAP4-5Q9BYR2 181 aa4.58□□□□□ -1.68
TRBV28-201ENST00000390400 SPACA4Q8TDM5 124 aa4.57□□□□□ -1.68
TRBV28-201ENST00000390400 Q6ZSA8 131 aa4.56□□□□□ -1.68
TRBV28-201ENST00000390400 PANO1I0J062 215 aa4.55□□□□□ -1.68
TRBV28-201ENST00000390400 IGFL1Q6UW32 110 aa4.55□□□□□ -1.68
TRBV28-201ENST00000390400 SPTSSBQ8NFR3 76 aa4.55□□□□□ -1.68
TRBV28-201ENST00000390400 DNAH5Q8TE73 4624 aa4.54□□□□□ -1.68
TRBV28-201ENST00000390400 FAM168BA1KXE4 195 aa4.54□□□□□ -1.68
TRBV28-201ENST00000390400 DEFB105AQ8NG35 78 aa4.54□□□□□ -1.68
TRBV28-201ENST00000390400 LINC00472Q9H8W2 130 aa4.53□□□□□ -1.68
TRBV28-201ENST00000390400 A0A1W2PNN7 141 aa4.52□□□□□ -1.69
TRBV28-201ENST00000390400 DYNC1H1Q14204 4646 aaKnown RBP4.51□□□□□ -1.69
TRBV28-201ENST00000390400 A0A087WSZ3 146 aa4.51□□□□□ -1.69
TRBV28-201ENST00000390400 C8orf87E5RJ46 101 aa4.51□□□□□ -1.69
TRBV28-201ENST00000390400 WFDC13Q8IUB5 93 aa4.51□□□□□ -1.69
TRBV28-201ENST00000390400 KRTAP7-1Q8IUC3 87 aa4.51□□□□□ -1.69
TRBV28-201ENST00000390400 CIRBP-AS1Q8TBR5 109 aa4.51□□□□□ -1.69
TRBV28-201ENST00000390400 LRP1BQ9NZR2 4599 aa4.51□□□□□ -1.69
TRBV28-201ENST00000390400 MMP24-AS1A0A0U1RRL7 71 aa4.5□□□□□ -1.69
TRBV28-201ENST00000390400 PRR4Q16378 134 aa4.5□□□□□ -1.69
TRBV28-201ENST00000390400 DNAH8Q96JB1 4490 aa4.49□□□□□ -1.69
TRBV28-201ENST00000390400 EPPK1P58107 5090 aaKnown RBP4.48□□□□□ -1.69
TRBV28-201ENST00000390400 LINC01554Q52M75 96 aa4.47□□□□□ -1.69
TRBV28-201ENST00000390400 SMR3BP02814 79 aaPredicted RBP4.45□□□□□ -1.7
TRBV28-201ENST00000390400 ACYP2P14621 99 aa4.45□□□□□ -1.7
TRBV28-201ENST00000390400 KRTAP11-1Q8IUC1 163 aa4.45□□□□□ -1.7
TRBV28-201ENST00000390400 A8MU10 97 aa4.44□□□□□ -1.7
TRBV28-201ENST00000390400 SPATA8Q6RVD6 105 aa4.44□□□□□ -1.7
TRBV28-201ENST00000390400 RETNLBQ9BQ08 111 aa4.44□□□□□ -1.7
TRBV28-201ENST00000390400 PSORS1C2Q9UIG4 136 aa4.44□□□□□ -1.7
TRBV28-201ENST00000390400 APOBP04114 4563 aaKnown RBP4.44□□□□□ -1.7
TRBV28-201ENST00000390400 HRES1P13985 223 aa4.43□□□□□ -1.7
TRBV28-201ENST00000390400 LINC00313P59037 77 aa4.42□□□□□ -1.7
TRBV28-201ENST00000390400 SPAG11AQ6PDA7 123 aa4.42□□□□□ -1.7
TRBV28-201ENST00000390400 C8orf17Q9NRJ1 99 aa4.42□□□□□ -1.7
TRBV28-201ENST00000390400 RYR1P21817 5038 aa4.42□□□□□ -1.7
TRBV28-201ENST00000390400 BIRC6Q9NR09 4857 aa4.42□□□□□ -1.7
TRBV28-201ENST00000390400 VPS13BQ7Z7G8 4022 aa4.41□□□□□ -1.7
TRBV28-201ENST00000390400 SPINK7P58062 85 aa4.41□□□□□ -1.7
TRBV28-201ENST00000390400 Q5VSD8 79 aa4.41□□□□□ -1.7
TRBV28-201ENST00000390400 MRPL34Q9BQ48 92 aaKnown RBP4.41□□□□□ -1.7
TRBV28-201ENST00000390400 KIAA1109Q2LD37 5005 aa4.41□□□□□ -1.7
TRBV28-201ENST00000390400 HSPG2P98160 4391 aa4.41□□□□□ -1.7
TRBV28-201ENST00000390400 A0A1B0GVX0 72 aa4.4□□□□□ -1.71
TRBV28-201ENST00000390400 KRTAP16-1A8MUX0 517 aa4.4□□□□□ -1.71
TRBV28-201ENST00000390400 IGLV7-43P04211 117 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms