RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 COL7A1Q02388 2944 aa7.26□□□□□ -1.25
KCNQ3-201ENST00000388996 Q6ZR54 194 aa7.26□□□□□ -1.25
KCNQ3-201ENST00000388996 RPL37P61927 97 aaKnown RBP7.25□□□□□ -1.25
KCNQ3-201ENST00000388996 H1FX-AS1Q4G0G2 97 aa7.25□□□□□ -1.25
KCNQ3-201ENST00000388996 ROMO1P60602 79 aa7.23□□□□□ -1.25
KCNQ3-201ENST00000388996 KRTAP4-16G5E9R7 235 aaPredicted RBP7.22□□□□□ -1.25
KCNQ3-201ENST00000388996 XIRP2A4UGR9 3374 aa7.22□□□□□ -1.25
KCNQ3-201ENST00000388996 PANO1I0J062 215 aa7.22□□□□□ -1.25
KCNQ3-201ENST00000388996 ADM2Q7Z4H4 148 aa7.22□□□□□ -1.25
KCNQ3-201ENST00000388996 COL6A3P12111 3177 aa7.21□□□□□ -1.26
KCNQ3-201ENST00000388996 OXTP01178 125 aa7.2□□□□□ -1.26
KCNQ3-201ENST00000388996 PLAC4Q8WY50 150 aa7.2□□□□□ -1.26
KCNQ3-201ENST00000388996 A0A087X002 238 aa7.16□□□□□ -1.26
KCNQ3-201ENST00000388996 USP34Q70CQ2 3546 aa7.14□□□□□ -1.27
KCNQ3-201ENST00000388996 FBN1P35555 2871 aaKnown RBP7.12□□□□□ -1.27
KCNQ3-201ENST00000388996 CELSR3Q9NYQ7 3312 aa7.11□□□□□ -1.27
KCNQ3-201ENST00000388996 KRTAP29-1A8MX34 341 aaPredicted RBP7.11□□□□□ -1.27
KCNQ3-201ENST00000388996 RPS29P62273 56 aaKnown RBP7.1□□□□□ -1.27
KCNQ3-201ENST00000388996 ASB16-AS1Q495Z4 193 aa7.1□□□□□ -1.27
KCNQ3-201ENST00000388996 SPATA8Q6RVD6 105 aa7.1□□□□□ -1.27
KCNQ3-201ENST00000388996 KRTAP16-1A8MUX0 517 aa7.07□□□□□ -1.28
KCNQ3-201ENST00000388996 MEGF8Q7Z7M0 2845 aa7.06□□□□□ -1.28
KCNQ3-201ENST00000388996 Q6ZRN7 208 aaPredicted RBP7.04□□□□□ -1.28
KCNQ3-201ENST00000388996 NOTCH2NLQ7Z3S9 236 aa7.03□□□□□ -1.28
KCNQ3-201ENST00000388996 KRTAP11-1Q8IUC1 163 aa6.99□□□□□ -1.29
KCNQ3-201ENST00000388996 DNAH14Q0VDD8 3507 aa6.98□□□□□ -1.29
KCNQ3-201ENST00000388996 OTOGQ6ZRI0 2925 aa6.97□□□□□ -1.29
KCNQ3-201ENST00000388996 SPTBN5Q9NRC6 3674 aaKnown RBP6.96□□□□□ -1.29
KCNQ3-201ENST00000388996 KRTAP13-2Q52LG2 175 aa6.96□□□□□ -1.3
KCNQ3-201ENST00000388996 A8MUU9 505 aa6.95□□□□□ -1.3
KCNQ3-201ENST00000388996 UNC80Q8N2C7 3258 aa6.95□□□□□ -1.3
KCNQ3-201ENST00000388996 VCANP13611 3396 aa6.91□□□□□ -1.3
KCNQ3-201ENST00000388996 NDUFAF8A1L188 74 aa6.91□□□□□ -1.3
KCNQ3-201ENST00000388996 KRTAP13-1Q8IUC0 172 aa6.91□□□□□ -1.3
KCNQ3-201ENST00000388996 SZT2Q5T011 3432 aa6.9□□□□□ -1.3
KCNQ3-201ENST00000388996 CFAP47Q6ZTR5 3102 aa6.9□□□□□ -1.31
KCNQ3-201ENST00000388996 EYSQ5T1H1 3165 aa6.89□□□□□ -1.31
KCNQ3-201ENST00000388996 KRTAP7-1Q8IUC3 87 aa6.88□□□□□ -1.31
KCNQ3-201ENST00000388996 C20orf166-AS1Q96NR2 134 aa6.87□□□□□ -1.31
KCNQ3-201ENST00000388996 A8MU10 97 aa6.85□□□□□ -1.31
KCNQ3-201ENST00000388996 CDH23Q9H251 3354 aa6.85□□□□□ -1.31
KCNQ3-201ENST00000388996 FBN3Q75N90 2809 aa6.81□□□□□ -1.32
KCNQ3-201ENST00000388996 KRTAP25-1Q3LHN0 102 aa6.81□□□□□ -1.32
KCNQ3-201ENST00000388996 A6NN06 94 aa6.8□□□□□ -1.32
KCNQ3-201ENST00000388996 MYO15AQ9UKN7 3530 aa6.8□□□□□ -1.32
KCNQ3-201ENST00000388996 KRTAP21-3Q3LHN1 58 aa6.78□□□□□ -1.32
KCNQ3-201ENST00000388996 SPEGQ15772 3267 aa6.74□□□□□ -1.33
KCNQ3-201ENST00000388996 NBPF19A0A087WUL8 3843 aa6.74□□□□□ -1.33
KCNQ3-201ENST00000388996 ZFHX3Q15911 3703 aa6.73□□□□□ -1.33
KCNQ3-201ENST00000388996 TNP1P09430 55 aa6.7□□□□□ -1.34
KCNQ3-201ENST00000388996 C10orf95Q9H7T3 257 aa6.64□□□□□ -1.35
KCNQ3-201ENST00000388996 XP32Q5T750 250 aa6.62□□□□□ -1.35
KCNQ3-201ENST00000388996 PP632Q6XCG6 107 aa6.59□□□□□ -1.35
KCNQ3-201ENST00000388996 DMDP11532 3685 aa6.57□□□□□ -1.36
KCNQ3-201ENST00000388996 KRTAP1-4P0C5Y4 121 aa6.56□□□□□ -1.36
KCNQ3-201ENST00000388996 SMG1Q96Q15 3661 aaKnown RBP6.55□□□□□ -1.36
KCNQ3-201ENST00000388996 WDFY3Q8IZQ1 3526 aa6.54□□□□□ -1.36
KCNQ3-201ENST00000388996 TPRXLQ17RH7 258 aa6.53□□□□□ -1.36
KCNQ3-201ENST00000388996 KRTAP10-8P60410 259 aa6.5□□□□□ -1.37
KCNQ3-201ENST00000388996 DCHS1Q96JQ0 3298 aa6.45□□□□□ -1.38
KCNQ3-201ENST00000388996 H0YAA0 97 aa6.45□□□□□ -1.38
KCNQ3-201ENST00000388996 ZFHX4Q86UP3 3567 aa6.45□□□□□ -1.38
KCNQ3-201ENST00000388996 LOC400499M0QZD8 3231 aa6.45□□□□□ -1.38
KCNQ3-201ENST00000388996 A0A1B0GVY2 172 aa6.44□□□□□ -1.38
KCNQ3-201ENST00000388996 PRO2289Q9P1D8 64 aa6.41□□□□□ -1.38
KCNQ3-201ENST00000388996 KRTAP10-10P60014 251 aa6.41□□□□□ -1.38
KCNQ3-201ENST00000388996 KRTAP13-3Q3SY46 172 aa6.38□□□□□ -1.39
KCNQ3-201ENST00000388996 SPENQ96T58 3664 aaKnown RBP6.38□□□□□ -1.39
KCNQ3-201ENST00000388996 TRRAPQ9Y4A5 3859 aa6.35□□□□□ -1.39
KCNQ3-201ENST00000388996 P0C880 135 aa6.34□□□□□ -1.39
KCNQ3-201ENST00000388996 LAMA5O15230 3695 aa6.3□□□□□ -1.4
KCNQ3-201ENST00000388996 ASPMQ8IZT6 3477 aa6.29□□□□□ -1.4
KCNQ3-201ENST00000388996 AKAP9Q99996 3911 aa6.26□□□□□ -1.41
KCNQ3-201ENST00000388996 VPS13CQ709C8 3753 aa6.24□□□□□ -1.41
KCNQ3-201ENST00000388996 CSMD1Q96PZ7 3565 aa6.19□□□□□ -1.42
KCNQ3-201ENST00000388996 RELNP78509 3460 aa6.09□□□□□ -1.43
KCNQ3-201ENST00000388996 KRTAP12-2P59991 146 aa6.05□□□□□ -1.44
KCNQ3-201ENST00000388996 KRTAP13-4Q3LI77 160 aa6.02□□□□□ -1.45
KCNQ3-201ENST00000388996 LYSTQ99698 3801 aa6□□□□□ -1.45
KCNQ3-201ENST00000388996 KRTAP12-1P59990 96 aa5.91□□□□□ -1.46
KCNQ3-201ENST00000388996 BSNQ9UPA5 3926 aa5.91□□□□□ -1.46
KCNQ3-201ENST00000388996 CUBNO60494 3623 aa5.87□□□□□ -1.47
KCNQ3-201ENST00000388996 CSMD3Q7Z407 3707 aa5.87□□□□□ -1.47
KCNQ3-201ENST00000388996 KRTAP15-1Q3LI76 137 aa5.82□□□□□ -1.48
KCNQ3-201ENST00000388996 KRTAP3-1Q9BYR8 98 aa5.78□□□□□ -1.48
KCNQ3-201ENST00000388996 ALMS1Q8TCU4 4167 aa5.77□□□□□ -1.49
KCNQ3-201ENST00000388996 SVEP1Q4LDE5 3571 aa5.76□□□□□ -1.49
KCNQ3-201ENST00000388996 KRTAP10-6P60371 365 aaPredicted RBP5.69□□□□□ -1.5
KCNQ3-201ENST00000388996 MUC3AQ02505 3323 aa5.66□□□□□ -1.5
KCNQ3-201ENST00000388996 DNAH3Q8TD57 4116 aa5.6□□□□□ -1.51
KCNQ3-201ENST00000388996 MT1HL1P0DM35 61 aa5.6□□□□□ -1.51
KCNQ3-201ENST00000388996 KRTAP10-12P60413 245 aa5.6□□□□□ -1.51
KCNQ3-201ENST00000388996 HECTD4Q9Y4D8 3996 aa5.59□□□□□ -1.52
KCNQ3-201ENST00000388996 ZNF469Q96JG9 3925 aaPredicted RBP5.58□□□□□ -1.52
KCNQ3-201ENST00000388996 DNAH7Q8WXX0 4024 aa5.54□□□□□ -1.52
KCNQ3-201ENST00000388996 ANK2Q01484 3957 aa5.52□□□□□ -1.53
KCNQ3-201ENST00000388996 CSMD2Q7Z408 3487 aa5.5□□□□□ -1.53
KCNQ3-201ENST00000388996 CMYA5Q8N3K9 4069 aa5.49□□□□□ -1.53
KCNQ3-201ENST00000388996 DNAH1Q9P2D7 4330 aa5.48□□□□□ -1.53
KCNQ3-201ENST00000388996 KRTAP3-2Q9BYR7 98 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms