RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 DEFB136Q30KP8 78 aa-5.78□□□□□ -3.33
SNORA40-201ENST00000388090 CLTCQ00610 1675 aaKnown RBP-5.8□□□□□ -3.34
SNORA40-201ENST00000388090 DNMBPQ6XZF7 1577 aa-5.8□□□□□ -3.34
SNORA40-201ENST00000388090 DEFB131BA0A096LNP1 70 aa-5.81□□□□□ -3.34
SNORA40-201ENST00000388090 ERVK-7P63135 1459 aa-5.83□□□□□ -3.34
SNORA40-201ENST00000388090 ATOX1O00244 68 aa-5.83□□□□□ -3.34
SNORA40-201ENST00000388090 PPP3R1P63098 170 aa-5.83□□□□□ -3.34
SNORA40-201ENST00000388090 PMCHL2Q9BQD1 86 aa-5.83□□□□□ -3.34
SNORA40-201ENST00000388090 NALCNQ8IZF0 1738 aa-5.83□□□□□ -3.34
SNORA40-201ENST00000388090 PZPP20742 1482 aa-5.83□□□□□ -3.34
SNORA40-201ENST00000388090 ROCK2O75116 1388 aaKnown RBP-5.84□□□□□ -3.34
SNORA40-201ENST00000388090 UQCRHLA0A096LP55 91 aa-5.85□□□□□ -3.35
SNORA40-201ENST00000388090 NDUFB1O75438 58 aa-5.85□□□□□ -3.35
SNORA40-201ENST00000388090 RPL13AP3Q6NVV1 102 aa-5.85□□□□□ -3.35
SNORA40-201ENST00000388090 ARFGEF2Q9Y6D5 1785 aa-5.85□□□□□ -3.35
SNORA40-201ENST00000388090 NDUFA4O00483 81 aa-5.86□□□□□ -3.35
SNORA40-201ENST00000388090 HMGN2P05204 90 aaKnown RBP-5.86□□□□□ -3.35
SNORA40-201ENST00000388090 NCOA2Q15596 1464 aa-5.86□□□□□ -3.35
SNORA40-201ENST00000388090 GNG4P50150 75 aa-5.87□□□□□ -3.35
SNORA40-201ENST00000388090 SZT2Q5T011 3432 aa-5.87□□□□□ -3.35
SNORA40-201ENST00000388090 IFI27P40305 119 aaPredicted RBP-5.88□□□□□ -3.35
SNORA40-201ENST00000388090 MINOS1Q5TGZ0 78 aa-5.88□□□□□ -3.35
SNORA40-201ENST00000388090 EPRSP07814 1512 aaKnown RBP-5.89□□□□□ -3.35
SNORA40-201ENST00000388090 NDUFA2O43678 99 aa-5.9□□□□□ -3.35
SNORA40-201ENST00000388090 NCBP2-AS2Q69YL0 99 aa-5.9□□□□□ -3.35
SNORA40-201ENST00000388090 ACBD7Q8N6N7 88 aa-5.9□□□□□ -3.35
SNORA40-201ENST00000388090 LEAP2Q969E1 77 aa-5.9□□□□□ -3.35
SNORA40-201ENST00000388090 TJP1Q07157 1748 aa-5.92□□□□□ -3.36
SNORA40-201ENST00000388090 MED14O60244 1454 aa-5.93□□□□□ -3.36
SNORA40-201ENST00000388090 SFTA3P0C7M3 94 aa-5.93□□□□□ -3.36
SNORA40-201ENST00000388090 CCDC88BA6NC98 1476 aa-5.94□□□□□ -3.36
SNORA40-201ENST00000388090 FANCAO15360 1455 aa-5.94□□□□□ -3.36
SNORA40-201ENST00000388090 CRIP1P50238 77 aa-5.94□□□□□ -3.36
SNORA40-201ENST00000388090 COL5A1-AS1Q5SY13 56 aa-5.94□□□□□ -3.36
SNORA40-201ENST00000388090 NEXMIFQ5QGS0 1516 aa-5.94□□□□□ -3.36
SNORA40-201ENST00000388090 CD163L1Q9NR16 1453 aa-5.95□□□□□ -3.36
SNORA40-201ENST00000388090 MRPL33O75394 65 aaKnown RBP-5.95□□□□□ -3.36
SNORA40-201ENST00000388090 C20orf78Q9BR46 151 aa-5.95□□□□□ -3.36
SNORA40-201ENST00000388090 NRAPQ86VF7 1730 aa-5.96□□□□□ -3.36
SNORA40-201ENST00000388090 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-5.99□□□□□ -3.37
SNORA40-201ENST00000388090 UBR1Q8IWV7 1749 aa-5.99□□□□□ -3.37
SNORA40-201ENST00000388090 UMAD1C9J7I0 102 aa-5.99□□□□□ -3.37
SNORA40-201ENST00000388090 FAUP35544 74 aaKnown RBP-5.99□□□□□ -3.37
SNORA40-201ENST00000388090 RNF17Q9BXT8 1623 aaKnown RBP-5.99□□□□□ -3.37
SNORA40-201ENST00000388090 CORTO00230 105 aa-6□□□□□ -3.37
SNORA40-201ENST00000388090 C6orf48Q9UBA6 75 aa-6.01□□□□□ -3.37
SNORA40-201ENST00000388090 FCER1GP30273 86 aa-6.02□□□□□ -3.37
SNORA40-201ENST00000388090 MAP3K4Q9Y6R4 1608 aa-6.03□□□□□ -3.37
SNORA40-201ENST00000388090 LINC00032P0C843 101 aa-6.03□□□□□ -3.37
SNORA40-201ENST00000388090 PPLO60437 1756 aa-6.03□□□□□ -3.38
SNORA40-201ENST00000388090 INO80Q9ULG1 1556 aaPredicted RBP-6.04□□□□□ -3.38
SNORA40-201ENST00000388090 URB2Q14146 1524 aaKnown RBP-6.04□□□□□ -3.38
SNORA40-201ENST00000388090 S100A1P23297 94 aa-6.05□□□□□ -3.38
SNORA40-201ENST00000388090 TMEM203Q969S6 136 aa-6.05□□□□□ -3.38
SNORA40-201ENST00000388090 KIF21BO75037 1637 aa-6.06□□□□□ -3.38
SNORA40-201ENST00000388090 WDFY4Q6ZS81 3184 aa-6.06□□□□□ -3.38
SNORA40-201ENST00000388090 MYMXA0A1B0GTQ4 84 aa-6.06□□□□□ -3.38
SNORA40-201ENST00000388090 GTF2H5Q6ZYL4 71 aa-6.06□□□□□ -3.38
SNORA40-201ENST00000388090 MYO3AQ8NEV4 1616 aa-6.07□□□□□ -3.38
SNORA40-201ENST00000388090 MUC3AQ02505 3323 aa-6.07□□□□□ -3.38
SNORA40-201ENST00000388090 MRPS10P82664 201 aaKnown RBP-6.07□□□□□ -3.38
SNORA40-201ENST00000388090 CROCC2H7BZ55 1655 aa-6.07□□□□□ -3.38
SNORA40-201ENST00000388090 LOC105371267A0A1B0GV96 52 aa-6.08□□□□□ -3.38
SNORA40-201ENST00000388090 SMIM11AP58511 58 aa-6.08□□□□□ -3.38
SNORA40-201ENST00000388090 PEA15Q15121 130 aa-6.08□□□□□ -3.38
SNORA40-201ENST00000388090 EP400Q96L91 3159 aa-6.09□□□□□ -3.38
SNORA40-201ENST00000388090 KCNQ1DNQ9H478 68 aa-6.09□□□□□ -3.38
SNORA40-201ENST00000388090 RICTORQ6R327 1708 aa-6.09□□□□□ -3.38
SNORA40-201ENST00000388090 PIK3C2BO00750 1634 aa-6.12□□□□□ -3.39
SNORA40-201ENST00000388090 DLEU1O43261 78 aa-6.12□□□□□ -3.39
SNORA40-201ENST00000388090 SARNPP82979 210 aaKnown RBP-6.12□□□□□ -3.39
SNORA40-201ENST00000388090 ARHGAP35Q9NRY4 1499 aa-6.12□□□□□ -3.39
SNORA40-201ENST00000388090 NREPQ16612 68 aa-6.14□□□□□ -3.39
SNORA40-201ENST00000388090 TSC22D3Q99576 134 aa-6.14□□□□□ -3.39
SNORA40-201ENST00000388090 DPY30Q9C005 99 aa-6.14□□□□□ -3.39
SNORA40-201ENST00000388090 HFM1A2PYH4 1435 aa-6.16□□□□□ -3.39
SNORA40-201ENST00000388090 CEBPZOSA8MTT3 80 aa-6.16□□□□□ -3.4
SNORA40-201ENST00000388090 ZFYVE16Q7Z3T8 1539 aa-6.16□□□□□ -3.4
SNORA40-201ENST00000388090 UBL5Q9BZL1 73 aa-6.18□□□□□ -3.4
SNORA40-201ENST00000388090 RABAC1Q9UI14 185 aa-6.18□□□□□ -3.4
SNORA40-201ENST00000388090 ASXL1Q8IXJ9 1541 aa-6.19□□□□□ -3.4
SNORA40-201ENST00000388090 KIF14Q15058 1648 aa-6.2□□□□□ -3.4
SNORA40-201ENST00000388090 CFAP43Q8NDM7 1665 aa-6.2□□□□□ -3.4
SNORA40-201ENST00000388090 A0A1B0GV90 55 aa-6.21□□□□□ -3.4
SNORA40-201ENST00000388090 MYO5CQ9NQX4 1742 aa-6.22□□□□□ -3.4
SNORA40-201ENST00000388090 HMGA1P17096 107 aaKnown RBP-6.22□□□□□ -3.41
SNORA40-201ENST00000388090 DCHS1Q96JQ0 3298 aa-6.23□□□□□ -3.41
SNORA40-201ENST00000388090 CEP250Q9BV73 2442 aa-6.23□□□□□ -3.41
SNORA40-201ENST00000388090 PREX2Q70Z35 1606 aa-6.25□□□□□ -3.41
SNORA40-201ENST00000388090 UNC13AQ9UPW8 1703 aa-6.26□□□□□ -3.41
SNORA40-201ENST00000388090 GNG8Q9UK08 70 aa-6.29□□□□□ -3.42
SNORA40-201ENST00000388090 RALGAPBQ86X10 1494 aa-6.29□□□□□ -3.42
SNORA40-201ENST00000388090 NHSQ6T4R5 1651 aa-6.3□□□□□ -3.42
SNORA40-201ENST00000388090 DNAH14Q0VDD8 3507 aa-6.32□□□□□ -3.42
SNORA40-201ENST00000388090 AKAP12Q02952 1782 aa-6.33□□□□□ -3.42
SNORA40-201ENST00000388090 ETDCA0A1B0GVM5 59 aa-6.33□□□□□ -3.42
SNORA40-201ENST00000388090 RBP2P50120 134 aa-6.33□□□□□ -3.42
SNORA40-201ENST00000388090 S100A10P60903 97 aa-6.33□□□□□ -3.42
SNORA40-201ENST00000388090 FAM208AQ9UK61 1670 aaKnown RBP-6.33□□□□□ -3.42
SNORA40-201ENST00000388090 CEP162Q5TB80 1403 aa-6.33□□□□□ -3.42
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms