RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 ACYP1P07311 99 aa8.77□□□□□ -1.01
SNRPB-201ENST00000381342 LINC00472Q9H8W2 130 aa8.77□□□□□ -1.01
SNRPB-201ENST00000381342 DSCR10P59022 87 aa8.7□□□□□ -1.02
SNRPB-201ENST00000381342 RPL37P61927 97 aaKnown RBP8.7□□□□□ -1.02
SNRPB-201ENST00000381342 LINC00846Q9NV44 126 aa8.7□□□□□ -1.02
SNRPB-201ENST00000381342 PCOTHQ58A44 107 aa8.68□□□□□ -1.02
SNRPB-201ENST00000381342 KRTAP4-1Q9BYQ7 146 aa8.67□□□□□ -1.02
SNRPB-201ENST00000381342 IGHV6-1A0A0B4J1U7 121 aa8.66□□□□□ -1.02
SNRPB-201ENST00000381342 J3KT08 172 aa8.66□□□□□ -1.02
SNRPB-201ENST00000381342 UBL5Q9BZL1 73 aa8.66□□□□□ -1.02
SNRPB-201ENST00000381342 A0A1B0GVX0 72 aa8.64□□□□□ -1.03
SNRPB-201ENST00000381342 NREPQ16612 68 aa8.64□□□□□ -1.03
SNRPB-201ENST00000381342 LCE2AQ5TA79 106 aaPredicted RBP8.64□□□□□ -1.03
SNRPB-201ENST00000381342 NOTCH2NLQ7Z3S9 236 aa8.64□□□□□ -1.03
SNRPB-201ENST00000381342 LINC00313P59037 77 aa8.63□□□□□ -1.03
SNRPB-201ENST00000381342 Q6ZVQ6 151 aa8.63□□□□□ -1.03
SNRPB-201ENST00000381342 Q75L30 129 aa8.63□□□□□ -1.03
SNRPB-201ENST00000381342 C20orf166-AS1Q96NR2 134 aa8.61□□□□□ -1.03
SNRPB-201ENST00000381342 FAT4Q6V0I7 4981 aa8.6□□□□□ -1.03
SNRPB-201ENST00000381342 KRTAP16-1A8MUX0 517 aa8.6□□□□□ -1.03
SNRPB-201ENST00000381342 LINC00643Q86TS7 51 aa8.59□□□□□ -1.03
SNRPB-201ENST00000381342 A8MUU9 505 aa8.58□□□□□ -1.04
SNRPB-201ENST00000381342 A8MWP4 228 aa8.58□□□□□ -1.04
SNRPB-201ENST00000381342 C8orf87E5RJ46 101 aa8.58□□□□□ -1.04
SNRPB-201ENST00000381342 IGKV3D-7A0A0C4DH55 119 aa8.57□□□□□ -1.04
SNRPB-201ENST00000381342 NDUFB1O75438 58 aa8.57□□□□□ -1.04
SNRPB-201ENST00000381342 ATP5EP2Q5VTU8 51 aa8.57□□□□□ -1.04
SNRPB-201ENST00000381342 ATP11AUNQ6ZP68 121 aa8.55□□□□□ -1.04
SNRPB-201ENST00000381342 CXCL6P80162 114 aa8.54□□□□□ -1.04
SNRPB-201ENST00000381342 BPY2O14599 106 aa8.53□□□□□ -1.04
SNRPB-201ENST00000381342 C8orf17Q9NRJ1 99 aa8.52□□□□□ -1.05
SNRPB-201ENST00000381342 K7EQZ3 153 aa8.51□□□□□ -1.05
SNRPB-201ENST00000381342 PRR15Q8IV56 129 aa8.51□□□□□ -1.05
SNRPB-201ENST00000381342 MMP24-AS1A0A0U1RRL7 71 aa8.47□□□□□ -1.05
SNRPB-201ENST00000381342 Q8N9L7 120 aa8.47□□□□□ -1.05
SNRPB-201ENST00000381342 KRTAP9-2Q9BYQ4 174 aa8.47□□□□□ -1.05
SNRPB-201ENST00000381342 MT-ATP8P03928 68 aa8.45□□□□□ -1.06
SNRPB-201ENST00000381342 IMUPQ9GZP8 106 aa8.43□□□□□ -1.06
SNRPB-201ENST00000381342 Q8N9P0 234 aaPredicted RBP8.42□□□□□ -1.06
SNRPB-201ENST00000381342 COX6B2Q6YFQ2 88 aa8.41□□□□□ -1.06
SNRPB-201ENST00000381342 hDV103S1A0JD37 113 aa8.4□□□□□ -1.06
SNRPB-201ENST00000381342 KRTAP19-2Q3LHN2 52 aa8.4□□□□□ -1.06
SNRPB-201ENST00000381342 TMEM254Q8TBM7 123 aa8.4□□□□□ -1.06
SNRPB-201ENST00000381342 HIST1H4AP62805 103 aaKnown RBP8.38□□□□□ -1.07
SNRPB-201ENST00000381342 LCE2CQ5TA81 110 aa8.38□□□□□ -1.07
SNRPB-201ENST00000381342 ZCCHC13Q8WW36 166 aaKnown RBP8.38□□□□□ -1.07
SNRPB-201ENST00000381342 MRPL34Q9BQ48 92 aaKnown RBP8.38□□□□□ -1.07
SNRPB-201ENST00000381342 WFDC13Q8IUB5 93 aa8.37□□□□□ -1.07
SNRPB-201ENST00000381342 CASC2Q6XLA1 102 aa8.34□□□□□ -1.07
SNRPB-201ENST00000381342 A0A087WVE0 104 aa8.33□□□□□ -1.08
SNRPB-201ENST00000381342 M0R2T5 61 aa8.33□□□□□ -1.08
SNRPB-201ENST00000381342 NDUFS5O43920 106 aa8.33□□□□□ -1.08
SNRPB-201ENST00000381342 MT1HP80294 61 aa8.32□□□□□ -1.08
SNRPB-201ENST00000381342 HCG22E2RYF7 251 aa8.31□□□□□ -1.08
SNRPB-201ENST00000381342 KRTAP3-3Q9BYR6 98 aa8.3□□□□□ -1.08
SNRPB-201ENST00000381342 KRTAP3-2Q9BYR7 98 aa8.3□□□□□ -1.08
SNRPB-201ENST00000381342 FAM236AA0A1B0GUQ0 79 aa8.24□□□□□ -1.09
SNRPB-201ENST00000381342 FAM236BA0A1B0GV22 79 aa8.24□□□□□ -1.09
SNRPB-201ENST00000381342 HRES1P13985 223 aa8.24□□□□□ -1.09
SNRPB-201ENST00000381342 SPINK7P58062 85 aa8.23□□□□□ -1.09
SNRPB-201ENST00000381342 SCGB1A1P11684 91 aa8.2□□□□□ -1.1
SNRPB-201ENST00000381342 Q5W150 140 aa8.2□□□□□ -1.1
SNRPB-201ENST00000381342 FLGP20930 4061 aaPredicted RBP8.2□□□□□ -1.1
SNRPB-201ENST00000381342 KRTAP9-6A0A140TA67 174 aa8.19□□□□□ -1.1
SNRPB-201ENST00000381342 MPLKIPQ8TAP9 179 aa8.19□□□□□ -1.1
SNRPB-201ENST00000381342 KRTAP10-6P60371 365 aaPredicted RBP8.18□□□□□ -1.1
SNRPB-201ENST00000381342 FAM236DA0A1B0GTK5 79 aa8.16□□□□□ -1.1
SNRPB-201ENST00000381342 ATOX1O00244 68 aa8.16□□□□□ -1.1
SNRPB-201ENST00000381342 FAM236CP0DP71 79 aa8.16□□□□□ -1.1
SNRPB-201ENST00000381342 RBM12B-AS1Q9P1G2 102 aa8.16□□□□□ -1.1
SNRPB-201ENST00000381342 LORP23490 312 aaPredicted RBP8.14□□□□□ -1.11
SNRPB-201ENST00000381342 SMIM20Q8N5G0 67 aa8.14□□□□□ -1.11
SNRPB-201ENST00000381342 TP53AIP1Q9HCN2 124 aa8.14□□□□□ -1.11
SNRPB-201ENST00000381342 IGKV2D-30A0A075B6S6 120 aa8.13□□□□□ -1.11
SNRPB-201ENST00000381342 IGKV2-30P06310 120 aa8.13□□□□□ -1.11
SNRPB-201ENST00000381342 OCR1Q9BZK8 76 aa8.13□□□□□ -1.11
SNRPB-201ENST00000381342 C7orf65Q6ZTY9 151 aa8.11□□□□□ -1.11
SNRPB-201ENST00000381342 UQCRQO14949 82 aa8.09□□□□□ -1.11
SNRPB-201ENST00000381342 TRAV7A0A075B6U4 112 aa8.07□□□□□ -1.12
SNRPB-201ENST00000381342 SERP2Q8N6R1 65 aa8.04□□□□□ -1.12
SNRPB-201ENST00000381342 CRCT1Q9UGL9 99 aa8.03□□□□□ -1.12
SNRPB-201ENST00000381342 TRAV22A0A0B4J277 110 aa8.02□□□□□ -1.13
SNRPB-201ENST00000381342 ANAPC13Q9BS18 74 aa8.02□□□□□ -1.13
SNRPB-201ENST00000381342 C5orf47Q569G3 176 aa8□□□□□ -1.13
SNRPB-201ENST00000381342 H0Y9P7 68 aa7.97□□□□□ -1.13
SNRPB-201ENST00000381342 COX7CP15954 63 aa7.96□□□□□ -1.14
SNRPB-201ENST00000381342 MP68P56378 58 aa7.96□□□□□ -1.14
SNRPB-201ENST00000381342 H3BPC8 53 aa7.95□□□□□ -1.14
SNRPB-201ENST00000381342 C4orf26Q17RF5 130 aa7.95□□□□□ -1.14
SNRPB-201ENST00000381342 LOC101927531A0A1B0GV80 90 aa7.91□□□□□ -1.14
SNRPB-201ENST00000381342 H1FX-AS1Q4G0G2 97 aa7.9□□□□□ -1.14
SNRPB-201ENST00000381342 C1orf64Q8NEQ6 169 aa7.89□□□□□ -1.15
SNRPB-201ENST00000381342 LINC00208Q96KT6 92 aa7.89□□□□□ -1.15
SNRPB-201ENST00000381342 CYP4F30PQ9H0H9 118 aa7.89□□□□□ -1.15
SNRPB-201ENST00000381342 FSIP2Q5CZC0 6907 aa7.88□□□□□ -1.15
SNRPB-201ENST00000381342 C20orf197Q8N268 126 aa7.87□□□□□ -1.15
SNRPB-201ENST00000381342 KLKP1Q107X0 134 aa7.86□□□□□ -1.15
SNRPB-201ENST00000381342 KRTAP9-8Q9BYQ0 159 aa7.86□□□□□ -1.15
SNRPB-201ENST00000381342 KRTAP3-1Q9BYR8 98 aa7.83□□□□□ -1.16
SNRPB-201ENST00000381342 CCDC179H3BU77 68 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms