RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 ATP5EP2Q5VTU8 51 aa10.69□□□□□ -0.7
GTF3A-201ENST00000381140 LINC00472Q9H8W2 130 aa10.66□□□□□ -0.7
GTF3A-201ENST00000381140 XP32Q5T750 250 aa10.65□□□□□ -0.7
GTF3A-201ENST00000381140 CXCL6P80162 114 aa10.65□□□□□ -0.71
GTF3A-201ENST00000381140 BPY2O14599 106 aa10.64□□□□□ -0.71
GTF3A-201ENST00000381140 Q96NJ1 140 aa10.64□□□□□ -0.71
GTF3A-201ENST00000381140 MT-ATP8P03928 68 aa10.63□□□□□ -0.71
GTF3A-201ENST00000381140 SIGMAR1Q99720 223 aa10.62□□□□□ -0.71
GTF3A-201ENST00000381140 IGKV3D-7A0A0C4DH55 119 aa10.61□□□□□ -0.71
GTF3A-201ENST00000381140 J3KT08 172 aa10.6□□□□□ -0.71
GTF3A-201ENST00000381140 SEC61BP60468 96 aaKnown RBP10.58□□□□□ -0.72
GTF3A-201ENST00000381140 DSCR10P59022 87 aa10.56□□□□□ -0.72
GTF3A-201ENST00000381140 DEFB116Q30KQ4 102 aa10.56□□□□□ -0.72
GTF3A-201ENST00000381140 IMUPQ9GZP8 106 aa10.56□□□□□ -0.72
GTF3A-201ENST00000381140 MUC17Q685J3 4493 aa10.55□□□□□ -0.72
GTF3A-201ENST00000381140 IGKV4-1P06312 121 aa10.54□□□□□ -0.72
GTF3A-201ENST00000381140 A8MWP4 228 aa10.52□□□□□ -0.73
GTF3A-201ENST00000381140 K7EQZ3 153 aa10.49□□□□□ -0.73
GTF3A-201ENST00000381140 HIST1H4AP62805 103 aaKnown RBP10.48□□□□□ -0.73
GTF3A-201ENST00000381140 Q8N9L7 120 aa10.48□□□□□ -0.73
GTF3A-201ENST00000381140 NDUFB1O75438 58 aa10.47□□□□□ -0.73
GTF3A-201ENST00000381140 PCOTHQ58A44 107 aa10.47□□□□□ -0.73
GTF3A-201ENST00000381140 PRR15Q8IV56 129 aa10.47□□□□□ -0.73
GTF3A-201ENST00000381140 A0A1B0GVX0 72 aa10.43□□□□□ -0.74
GTF3A-201ENST00000381140 RPL37P61927 97 aaKnown RBP10.43□□□□□ -0.74
GTF3A-201ENST00000381140 MUC2Q02817 5179 aa10.43□□□□□ -0.74
GTF3A-201ENST00000381140 A0A087WVE0 104 aa10.42□□□□□ -0.74
GTF3A-201ENST00000381140 KRTAP4-1Q9BYQ7 146 aa10.42□□□□□ -0.74
GTF3A-201ENST00000381140 A0A0U1RQV1 116 aa10.41□□□□□ -0.74
GTF3A-201ENST00000381140 IGHV6-1A0A0B4J1U7 121 aa10.38□□□□□ -0.75
GTF3A-201ENST00000381140 C8orf87E5RJ46 101 aa10.37□□□□□ -0.75
GTF3A-201ENST00000381140 HCG22E2RYF7 251 aa10.36□□□□□ -0.75
GTF3A-201ENST00000381140 C8orf17Q9NRJ1 99 aa10.36□□□□□ -0.75
GTF3A-201ENST00000381140 MMP24-AS1A0A0U1RRL7 71 aa10.35□□□□□ -0.75
GTF3A-201ENST00000381140 LINC00313P59037 77 aa10.35□□□□□ -0.75
GTF3A-201ENST00000381140 SCGB1A1P11684 91 aa10.34□□□□□ -0.75
GTF3A-201ENST00000381140 FAM236AA0A1B0GUQ0 79 aa10.33□□□□□ -0.76
GTF3A-201ENST00000381140 FAM236BA0A1B0GV22 79 aa10.33□□□□□ -0.76
GTF3A-201ENST00000381140 Q75L30 129 aa10.33□□□□□ -0.76
GTF3A-201ENST00000381140 NOTCH2NLQ7Z3S9 236 aa10.31□□□□□ -0.76
GTF3A-201ENST00000381140 LCE2AQ5TA79 106 aaPredicted RBP10.3□□□□□ -0.76
GTF3A-201ENST00000381140 ATP11AUNQ6ZP68 121 aa10.3□□□□□ -0.76
GTF3A-201ENST00000381140 CASC2Q6XLA1 102 aa10.29□□□□□ -0.76
GTF3A-201ENST00000381140 hDV103S1A0JD37 113 aa10.28□□□□□ -0.76
GTF3A-201ENST00000381140 WFDC13Q8IUB5 93 aa10.28□□□□□ -0.76
GTF3A-201ENST00000381140 C20orf166-AS1Q96NR2 134 aa10.27□□□□□ -0.76
GTF3A-201ENST00000381140 A8MUU9 505 aa10.26□□□□□ -0.77
GTF3A-201ENST00000381140 TMEM254Q8TBM7 123 aa10.26□□□□□ -0.77
GTF3A-201ENST00000381140 KRTAP16-1A8MUX0 517 aa10.25□□□□□ -0.77
GTF3A-201ENST00000381140 FAT4Q6V0I7 4981 aa10.24□□□□□ -0.77
GTF3A-201ENST00000381140 ATOX1O00244 68 aa10.23□□□□□ -0.77
GTF3A-201ENST00000381140 MRPL34Q9BQ48 92 aaKnown RBP10.23□□□□□ -0.77
GTF3A-201ENST00000381140 SMIM20Q8N5G0 67 aa10.16□□□□□ -0.78
GTF3A-201ENST00000381140 Q8N9P0 234 aaPredicted RBP10.16□□□□□ -0.78
GTF3A-201ENST00000381140 OCR1Q9BZK8 76 aa10.14□□□□□ -0.79
GTF3A-201ENST00000381140 TRAV7A0A075B6U4 112 aa10.11□□□□□ -0.79
GTF3A-201ENST00000381140 TP53AIP1Q9HCN2 124 aa10.11□□□□□ -0.79
GTF3A-201ENST00000381140 NDUFS5O43920 106 aa10.09□□□□□ -0.79
GTF3A-201ENST00000381140 ANAPC13Q9BS18 74 aa10.09□□□□□ -0.79
GTF3A-201ENST00000381140 UQCRQO14949 82 aa10.08□□□□□ -0.8
GTF3A-201ENST00000381140 SERP2Q8N6R1 65 aa10.08□□□□□ -0.8
GTF3A-201ENST00000381140 KRTAP19-2Q3LHN2 52 aa10.07□□□□□ -0.8
GTF3A-201ENST00000381140 LCE2CQ5TA81 110 aa10.06□□□□□ -0.8
GTF3A-201ENST00000381140 COX6B2Q6YFQ2 88 aa10.06□□□□□ -0.8
GTF3A-201ENST00000381140 ZCCHC13Q8WW36 166 aaKnown RBP10.01□□□□□ -0.81
GTF3A-201ENST00000381140 COX7CP15954 63 aa10.01□□□□□ -0.81
GTF3A-201ENST00000381140 TRAV22A0A0B4J277 110 aa9.99□□□□□ -0.81
GTF3A-201ENST00000381140 C5orf47Q569G3 176 aa9.99□□□□□ -0.81
GTF3A-201ENST00000381140 Q5W150 140 aa9.95□□□□□ -0.82
GTF3A-201ENST00000381140 H0Y9P7 68 aa9.94□□□□□ -0.82
GTF3A-201ENST00000381140 MT1HP80294 61 aa9.94□□□□□ -0.82
GTF3A-201ENST00000381140 MP68P56378 58 aa9.93□□□□□ -0.82
GTF3A-201ENST00000381140 PCP4P48539 62 aa9.92□□□□□ -0.82
GTF3A-201ENST00000381140 H3BPC8 53 aa9.91□□□□□ -0.82
GTF3A-201ENST00000381140 C20orf197Q8N268 126 aa9.88□□□□□ -0.83
GTF3A-201ENST00000381140 SPINK7P58062 85 aa9.87□□□□□ -0.83
GTF3A-201ENST00000381140 FAM236DA0A1B0GTK5 79 aa9.86□□□□□ -0.83
GTF3A-201ENST00000381140 CCDC179H3BU77 68 aa9.86□□□□□ -0.83
GTF3A-201ENST00000381140 M0R2T5 61 aa9.86□□□□□ -0.83
GTF3A-201ENST00000381140 FAM236CP0DP71 79 aa9.86□□□□□ -0.83
GTF3A-201ENST00000381140 HRES1P13985 223 aa9.86□□□□□ -0.83
GTF3A-201ENST00000381140 KLKP1Q107X0 134 aa9.85□□□□□ -0.83
GTF3A-201ENST00000381140 LINC00208Q96KT6 92 aa9.85□□□□□ -0.83
GTF3A-201ENST00000381140 LOC101927531A0A1B0GV80 90 aa9.83□□□□□ -0.84
GTF3A-201ENST00000381140 LORP23490 312 aaPredicted RBP9.83□□□□□ -0.84
GTF3A-201ENST00000381140 C1orf64Q8NEQ6 169 aa9.83□□□□□ -0.84
GTF3A-201ENST00000381140 RBM12B-AS1Q9P1G2 102 aa9.83□□□□□ -0.84
GTF3A-201ENST00000381140 IGKV2-30P06310 120 aa9.81□□□□□ -0.84
GTF3A-201ENST00000381140 SNURFQ9Y675 71 aa9.8□□□□□ -0.84
GTF3A-201ENST00000381140 MPLKIPQ8TAP9 179 aa9.77□□□□□ -0.84
GTF3A-201ENST00000381140 FLGP20930 4061 aaPredicted RBP9.76□□□□□ -0.85
GTF3A-201ENST00000381140 C7orf65Q6ZTY9 151 aa9.75□□□□□ -0.85
GTF3A-201ENST00000381140 CYP4F30PQ9H0H9 118 aa9.75□□□□□ -0.85
GTF3A-201ENST00000381140 IGKV2D-30A0A075B6S6 120 aa9.74□□□□□ -0.85
GTF3A-201ENST00000381140 NDUFC1O43677 76 aa9.73□□□□□ -0.85
GTF3A-201ENST00000381140 CYSTM1Q9H1C7 97 aa9.73□□□□□ -0.85
GTF3A-201ENST00000381140 KRTAP10-6P60371 365 aaPredicted RBP9.7□□□□□ -0.86
GTF3A-201ENST00000381140 H7BZZ5 65 aa9.67□□□□□ -0.86
GTF3A-201ENST00000381140 KRTAP9-2Q9BYQ4 174 aa9.62□□□□□ -0.87
GTF3A-201ENST00000381140 SPANXA2-OT1Q8N9U9 137 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms