RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 UBL5Q9BZL1 73 aa10.26□□□□□ -0.77
SMN2-202ENST00000380742 A0A1B0GVX0 72 aa10.24□□□□□ -0.77
SMN2-202ENST00000380742 DSCR10P59022 87 aa10.24□□□□□ -0.77
SMN2-202ENST00000380742 UBR4Q5T4S7 5183 aa10.23□□□□□ -0.77
SMN2-202ENST00000380742 IGHV6-1A0A0B4J1U7 121 aa10.23□□□□□ -0.77
SMN2-202ENST00000380742 FAM240AA0A1B0GVK7 77 aa10.23□□□□□ -0.77
SMN2-202ENST00000380742 A8MWP4 228 aa10.23□□□□□ -0.77
SMN2-202ENST00000380742 ACYP1P07311 99 aa10.23□□□□□ -0.77
SMN2-202ENST00000380742 BPY2O14599 106 aa10.22□□□□□ -0.77
SMN2-202ENST00000380742 NOTCH2NLQ7Z3S9 236 aa10.22□□□□□ -0.77
SMN2-202ENST00000380742 IGKV3D-7A0A0C4DH55 119 aa10.21□□□□□ -0.78
SMN2-202ENST00000380742 PCP4P48539 62 aa10.21□□□□□ -0.78
SMN2-202ENST00000380742 NDUFB1O75438 58 aa10.2□□□□□ -0.78
SMN2-202ENST00000380742 MUC17Q685J3 4493 aa10.2□□□□□ -0.78
SMN2-202ENST00000380742 LINC00313P59037 77 aa10.19□□□□□ -0.78
SMN2-202ENST00000380742 SVIPQ8NHG7 77 aa10.17□□□□□ -0.78
SMN2-202ENST00000380742 K7EQZ3 153 aa10.16□□□□□ -0.78
SMN2-202ENST00000380742 PRR15Q8IV56 129 aa10.16□□□□□ -0.78
SMN2-202ENST00000380742 C8orf87E5RJ46 101 aa10.15□□□□□ -0.78
SMN2-202ENST00000380742 KRTAP16-1A8MUX0 517 aa10.14□□□□□ -0.79
SMN2-202ENST00000380742 J3QR89 54 aa10.13□□□□□ -0.79
SMN2-202ENST00000380742 Q8N9L7 120 aa10.13□□□□□ -0.79
SMN2-202ENST00000380742 C8orf17Q9NRJ1 99 aa10.13□□□□□ -0.79
SMN2-202ENST00000380742 RPL37P61927 97 aaKnown RBP10.11□□□□□ -0.79
SMN2-202ENST00000380742 LCE2BO14633 110 aa10.09□□□□□ -0.79
SMN2-202ENST00000380742 CXCL6P80162 114 aa10.09□□□□□ -0.79
SMN2-202ENST00000380742 Q75L30 129 aa10.09□□□□□ -0.79
SMN2-202ENST00000380742 C20orf166-AS1Q96NR2 134 aa10.09□□□□□ -0.79
SMN2-202ENST00000380742 RNF213Q63HN8 5207 aa10.09□□□□□ -0.79
SMN2-202ENST00000380742 MMP24-AS1A0A0U1RRL7 71 aa10.08□□□□□ -0.8
SMN2-202ENST00000380742 A8MUU9 505 aa10.08□□□□□ -0.8
SMN2-202ENST00000380742 SEC61BP60468 96 aaKnown RBP10.07□□□□□ -0.8
SMN2-202ENST00000380742 PCOTHQ58A44 107 aa10.03□□□□□ -0.8
SMN2-202ENST00000380742 LINC00643Q86TS7 51 aa10.02□□□□□ -0.8
SMN2-202ENST00000380742 K7ERU9 68 aa10.01□□□□□ -0.81
SMN2-202ENST00000380742 ATP5EP2Q5VTU8 51 aa10.01□□□□□ -0.81
SMN2-202ENST00000380742 hDV103S1A0JD37 113 aa10□□□□□ -0.81
SMN2-202ENST00000380742 TMEM254Q8TBM7 123 aa10□□□□□ -0.81
SMN2-202ENST00000380742 Q8N9P0 234 aaPredicted RBP9.99□□□□□ -0.81
SMN2-202ENST00000380742 WFDC13Q8IUB5 93 aa9.98□□□□□ -0.81
SMN2-202ENST00000380742 MRPL34Q9BQ48 92 aaKnown RBP9.98□□□□□ -0.81
SMN2-202ENST00000380742 ATP11AUNQ6ZP68 121 aa9.97□□□□□ -0.81
SMN2-202ENST00000380742 CASC2Q6XLA1 102 aa9.96□□□□□ -0.82
SMN2-202ENST00000380742 KRTAP4-1Q9BYQ7 146 aa9.96□□□□□ -0.82
SMN2-202ENST00000380742 HCG22E2RYF7 251 aa9.95□□□□□ -0.82
SMN2-202ENST00000380742 MUC2Q02817 5179 aa9.94□□□□□ -0.82
SMN2-202ENST00000380742 HIST1H4AP62805 103 aaKnown RBP9.91□□□□□ -0.82
SMN2-202ENST00000380742 NDUFS5O43920 106 aa9.87□□□□□ -0.83
SMN2-202ENST00000380742 ZCCHC13Q8WW36 166 aaKnown RBP9.87□□□□□ -0.83
SMN2-202ENST00000380742 A0A087WVE0 104 aa9.85□□□□□ -0.83
SMN2-202ENST00000380742 MT-ATP8P03928 68 aa9.79□□□□□ -0.84
SMN2-202ENST00000380742 Q5W150 140 aa9.77□□□□□ -0.84
SMN2-202ENST00000380742 SCGB1A1P11684 91 aa9.75□□□□□ -0.85
SMN2-202ENST00000380742 IMUPQ9GZP8 106 aa9.72□□□□□ -0.85
SMN2-202ENST00000380742 TP53AIP1Q9HCN2 124 aa9.71□□□□□ -0.86
SMN2-202ENST00000380742 SPINK7P58062 85 aa9.67□□□□□ -0.86
SMN2-202ENST00000380742 FAT4Q6V0I7 4981 aa9.66□□□□□ -0.86
SMN2-202ENST00000380742 KRTAP19-2Q3LHN2 52 aa9.64□□□□□ -0.87
SMN2-202ENST00000380742 HRES1P13985 223 aa9.63□□□□□ -0.87
SMN2-202ENST00000380742 IGKV2D-30A0A075B6S6 120 aa9.6□□□□□ -0.87
SMN2-202ENST00000380742 A0A0U1RQV1 116 aa9.6□□□□□ -0.87
SMN2-202ENST00000380742 IGKV2-30P06310 120 aa9.6□□□□□ -0.87
SMN2-202ENST00000380742 OCR1Q9BZK8 76 aa9.6□□□□□ -0.87
SMN2-202ENST00000380742 UQCRQO14949 82 aa9.59□□□□□ -0.87
SMN2-202ENST00000380742 LCE2CQ5TA81 110 aa9.58□□□□□ -0.88
SMN2-202ENST00000380742 TRAV22A0A0B4J277 110 aa9.57□□□□□ -0.88
SMN2-202ENST00000380742 C7orf65Q6ZTY9 151 aa9.57□□□□□ -0.88
SMN2-202ENST00000380742 FAM236AA0A1B0GUQ0 79 aa9.56□□□□□ -0.88
SMN2-202ENST00000380742 FAM236BA0A1B0GV22 79 aa9.56□□□□□ -0.88
SMN2-202ENST00000380742 MPLKIPQ8TAP9 179 aa9.56□□□□□ -0.88
SMN2-202ENST00000380742 LCE2AQ5TA79 106 aaPredicted RBP9.54□□□□□ -0.88
SMN2-202ENST00000380742 H0Y9P7 68 aa9.52□□□□□ -0.88
SMN2-202ENST00000380742 COX6B2Q6YFQ2 88 aa9.5□□□□□ -0.89
SMN2-202ENST00000380742 RBM12B-AS1Q9P1G2 102 aa9.5□□□□□ -0.89
SMN2-202ENST00000380742 ATOX1O00244 68 aa9.47□□□□□ -0.89
SMN2-202ENST00000380742 LOC101927531A0A1B0GV80 90 aa9.46□□□□□ -0.9
SMN2-202ENST00000380742 CYP4F30PQ9H0H9 118 aa9.46□□□□□ -0.9
SMN2-202ENST00000380742 C5orf47Q569G3 176 aa9.45□□□□□ -0.9
SMN2-202ENST00000380742 FAM236DA0A1B0GTK5 79 aa9.44□□□□□ -0.9
SMN2-202ENST00000380742 FAM236CP0DP71 79 aa9.44□□□□□ -0.9
SMN2-202ENST00000380742 FLGP20930 4061 aaPredicted RBP9.43□□□□□ -0.9
SMN2-202ENST00000380742 MP68P56378 58 aa9.42□□□□□ -0.9
SMN2-202ENST00000380742 C1orf64Q8NEQ6 169 aa9.42□□□□□ -0.9
SMN2-202ENST00000380742 LINC00208Q96KT6 92 aa9.42□□□□□ -0.9
SMN2-202ENST00000380742 TRAV7A0A075B6U4 112 aa9.41□□□□□ -0.9
SMN2-202ENST00000380742 SMIM20Q8N5G0 67 aa9.41□□□□□ -0.9
SMN2-202ENST00000380742 MT1HP80294 61 aa9.4□□□□□ -0.9
SMN2-202ENST00000380742 C4orf26Q17RF5 130 aa9.39□□□□□ -0.91
SMN2-202ENST00000380742 H3BPC8 53 aa9.35□□□□□ -0.91
SMN2-202ENST00000380742 KLKP1Q107X0 134 aa9.31□□□□□ -0.92
SMN2-202ENST00000380742 SERP2Q8N6R1 65 aa9.29□□□□□ -0.92
SMN2-202ENST00000380742 KRTAP4-8Q9BYQ9 185 aa9.29□□□□□ -0.92
SMN2-202ENST00000380742 KRTAP3-1Q9BYR8 98 aa9.29□□□□□ -0.92
SMN2-202ENST00000380742 H1FX-AS1Q4G0G2 97 aa9.26□□□□□ -0.93
SMN2-202ENST00000380742 M0R2T5 61 aa9.24□□□□□ -0.93
SMN2-202ENST00000380742 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.19□□□□□ -0.94
SMN2-202ENST00000380742 SNURFQ9Y675 71 aa9.19□□□□□ -0.94
SMN2-202ENST00000380742 C20orf197Q8N268 126 aa9.18□□□□□ -0.94
SMN2-202ENST00000380742 COX7CP15954 63 aa9.16□□□□□ -0.94
SMN2-202ENST00000380742 KRTAP10-6P60371 365 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms