RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 C1orf195Q5TG92 126 aa11.4□□□□□ -0.58
PDLIM5-205ENST00000380180 NOTCH2NLQ7Z3S9 236 aa11.4□□□□□ -0.58
PDLIM5-205ENST00000380180 LIMD2Q9BT23 127 aa11.39□□□□□ -0.59
PDLIM5-205ENST00000380180 H7BZZ5 65 aa11.38□□□□□ -0.59
PDLIM5-205ENST00000380180 C5orf47Q569G3 176 aa11.38□□□□□ -0.59
PDLIM5-205ENST00000380180 SPINK1P00995 79 aa11.38□□□□□ -0.59
PDLIM5-205ENST00000380180 TMEM258P61165 79 aa11.38□□□□□ -0.59
PDLIM5-205ENST00000380180 FAM229AH3BQW9 127 aa11.34□□□□□ -0.59
PDLIM5-205ENST00000380180 LINC00304Q8N9R0 145 aa11.34□□□□□ -0.59
PDLIM5-205ENST00000380180 NDUFC1O43677 76 aa11.32□□□□□ -0.6
PDLIM5-205ENST00000380180 MRPL34Q9BQ48 92 aaKnown RBP11.31□□□□□ -0.6
PDLIM5-205ENST00000380180 SPAG11AQ6PDA7 123 aa11.29□□□□□ -0.6
PDLIM5-205ENST00000380180 MP68P56378 58 aa11.28□□□□□ -0.6
PDLIM5-205ENST00000380180 ZCCHC13Q8WW36 166 aaKnown RBP11.28□□□□□ -0.6
PDLIM5-205ENST00000380180 C8orf87E5RJ46 101 aa11.27□□□□□ -0.61
PDLIM5-205ENST00000380180 NDUFS5O43920 106 aa11.27□□□□□ -0.61
PDLIM5-205ENST00000380180 H0Y9P7 68 aa11.26□□□□□ -0.61
PDLIM5-205ENST00000380180 RPS29P62273 56 aaKnown RBP11.26□□□□□ -0.61
PDLIM5-205ENST00000380180 Q5VSD8 79 aa11.26□□□□□ -0.61
PDLIM5-205ENST00000380180 TP53AIP1Q9HCN2 124 aa11.26□□□□□ -0.61
PDLIM5-205ENST00000380180 LINC00313P59037 77 aa11.26□□□□□ -0.61
PDLIM5-205ENST00000380180 HSPG2P98160 4391 aa11.24□□□□□ -0.61
PDLIM5-205ENST00000380180 LINC00208Q96KT6 92 aa11.24□□□□□ -0.61
PDLIM5-205ENST00000380180 TRAV22A0A0B4J277 110 aa11.23□□□□□ -0.61
PDLIM5-205ENST00000380180 FAM236DA0A1B0GTK5 79 aa11.22□□□□□ -0.61
PDLIM5-205ENST00000380180 FAM236CP0DP71 79 aa11.22□□□□□ -0.61
PDLIM5-205ENST00000380180 PKHD1L1Q86WI1 4243 aa11.21□□□□□ -0.61
PDLIM5-205ENST00000380180 H3BPC8 53 aa11.19□□□□□ -0.62
PDLIM5-205ENST00000380180 KRTAP17-1Q9BYP8 105 aa11.18□□□□□ -0.62
PDLIM5-205ENST00000380180 C1orf64Q8NEQ6 169 aa11.16□□□□□ -0.62
PDLIM5-205ENST00000380180 RYR1P21817 5038 aa11.15□□□□□ -0.62
PDLIM5-205ENST00000380180 KRTAP16-1A8MUX0 517 aa11.13□□□□□ -0.63
PDLIM5-205ENST00000380180 Q8N9P0 234 aaPredicted RBP11.11□□□□□ -0.63
PDLIM5-205ENST00000380180 RPS28P62857 69 aaKnown RBP11.11□□□□□ -0.63
PDLIM5-205ENST00000380180 ATP5EP56381 51 aaPredicted RBP11.1□□□□□ -0.63
PDLIM5-205ENST00000380180 Q5W150 140 aa11.1□□□□□ -0.63
PDLIM5-205ENST00000380180 KIAA1109Q2LD37 5005 aa11.08□□□□□ -0.64
PDLIM5-205ENST00000380180 KRTAP10-8P60410 259 aa11.08□□□□□ -0.64
PDLIM5-205ENST00000380180 FLG2Q5D862 2391 aaPredicted RBP11.08□□□□□ -0.64
PDLIM5-205ENST00000380180 Q8N1X5 172 aa11.07□□□□□ -0.64
PDLIM5-205ENST00000380180 EPPK1P58107 5090 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-205ENST00000380180 LRP1Q07954 4544 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-205ENST00000380180 KRTAP13-3Q3SY46 172 aa11.06□□□□□ -0.64
PDLIM5-205ENST00000380180 OXTP01178 125 aa11.03□□□□□ -0.64
PDLIM5-205ENST00000380180 RETNLBQ9BQ08 111 aa11.02□□□□□ -0.64
PDLIM5-205ENST00000380180 SERP1Q9Y6X1 66 aa11.02□□□□□ -0.64
PDLIM5-205ENST00000380180 TNXBP22105 4242 aa11□□□□□ -0.65
PDLIM5-205ENST00000380180 PRR4Q16378 134 aa10.99□□□□□ -0.65
PDLIM5-205ENST00000380180 PCOTHQ58A44 107 aa10.98□□□□□ -0.65
PDLIM5-205ENST00000380180 LOC101927531A0A1B0GV80 90 aa10.96□□□□□ -0.65
PDLIM5-205ENST00000380180 SPANXA2-OT1Q8N9U9 137 aa10.96□□□□□ -0.66
PDLIM5-205ENST00000380180 C9orf92A6NGG3 77 aa10.94□□□□□ -0.66
PDLIM5-205ENST00000380180 CYP4F30PQ9H0H9 118 aa10.94□□□□□ -0.66
PDLIM5-205ENST00000380180 DMBT1Q9UGM3 2413 aaPredicted RBP10.93□□□□□ -0.66
PDLIM5-205ENST00000380180 FAT3Q8TDW7 4589 aa10.91□□□□□ -0.66
PDLIM5-205ENST00000380180 IGLV7-46A0A075B6I9 117 aa10.89□□□□□ -0.67
PDLIM5-205ENST00000380180 MT1HL1P0DM35 61 aa10.87□□□□□ -0.67
PDLIM5-205ENST00000380180 IGKV2-30P06310 120 aa10.85□□□□□ -0.67
PDLIM5-205ENST00000380180 MYCBP2O75592 4640 aa10.82□□□□□ -0.68
PDLIM5-205ENST00000380180 C20orf166-AS1Q96NR2 134 aa10.82□□□□□ -0.68
PDLIM5-205ENST00000380180 BIRC6Q9NR09 4857 aa10.82□□□□□ -0.68
PDLIM5-205ENST00000380180 A8MUU9 505 aa10.82□□□□□ -0.68
PDLIM5-205ENST00000380180 KRTAP4-5Q9BYR2 181 aa10.8□□□□□ -0.68
PDLIM5-205ENST00000380180 IGKV2D-30A0A075B6S6 120 aa10.77□□□□□ -0.68
PDLIM5-205ENST00000380180 SMIM26A0A096LP01 95 aa10.77□□□□□ -0.68
PDLIM5-205ENST00000380180 FP248Q71RG6 208 aaPredicted RBP10.77□□□□□ -0.68
PDLIM5-205ENST00000380180 HRES1P13985 223 aa10.75□□□□□ -0.69
PDLIM5-205ENST00000380180 Q75L30 129 aa10.68□□□□□ -0.7
PDLIM5-205ENST00000380180 COA5Q86WW8 74 aa10.67□□□□□ -0.7
PDLIM5-205ENST00000380180 C7orf65Q6ZTY9 151 aa10.67□□□□□ -0.7
PDLIM5-205ENST00000380180 MPLKIPQ8TAP9 179 aa10.62□□□□□ -0.71
PDLIM5-205ENST00000380180 C4orf26Q17RF5 130 aa10.61□□□□□ -0.71
PDLIM5-205ENST00000380180 DMAC1Q96GE9 116 aa10.6□□□□□ -0.71
PDLIM5-205ENST00000380180 ACYP2P14621 99 aa10.58□□□□□ -0.72
PDLIM5-205ENST00000380180 XP32Q5T750 250 aa10.58□□□□□ -0.72
PDLIM5-205ENST00000380180 HERC2O95714 4834 aa10.56□□□□□ -0.72
PDLIM5-205ENST00000380180 RPL37P61927 97 aaKnown RBP10.54□□□□□ -0.72
PDLIM5-205ENST00000380180 ATP11AUNQ6ZP68 121 aa10.54□□□□□ -0.72
PDLIM5-205ENST00000380180 SPINK7P58062 85 aa10.53□□□□□ -0.72
PDLIM5-205ENST00000380180 Q1T7F1 81 aa10.51□□□□□ -0.73
PDLIM5-205ENST00000380180 ABCA13Q86UQ4 5058 aa10.48□□□□□ -0.73
PDLIM5-205ENST00000380180 TPRXLQ17RH7 258 aa10.45□□□□□ -0.74
PDLIM5-205ENST00000380180 CHKB-CPT1BH3BT56 60 aa10.42□□□□□ -0.74
PDLIM5-205ENST00000380180 J3QL48 77 aa10.42□□□□□ -0.74
PDLIM5-205ENST00000380180 V9GYY9 64 aa10.41□□□□□ -0.74
PDLIM5-205ENST00000380180 A8MUN3 132 aa10.38□□□□□ -0.75
PDLIM5-205ENST00000380180 PSPHP1O15172 72 aa10.37□□□□□ -0.75
PDLIM5-205ENST00000380180 KRTAP3-1Q9BYR8 98 aa10.35□□□□□ -0.75
PDLIM5-205ENST00000380180 LINC01558Q9Y6Z2 57 aa10.31□□□□□ -0.76
PDLIM5-205ENST00000380180 LPAP08519 4548 aa10.3□□□□□ -0.76
PDLIM5-205ENST00000380180 LRP2P98164 4655 aa10.29□□□□□ -0.76
PDLIM5-205ENST00000380180 COX6B2Q6YFQ2 88 aa10.28□□□□□ -0.76
PDLIM5-205ENST00000380180 PRR15LQ9BU68 103 aa10.28□□□□□ -0.76
PDLIM5-205ENST00000380180 Q5VV11 94 aa10.25□□□□□ -0.77
PDLIM5-205ENST00000380180 PCLOQ9Y6V0 5065 aa10.21□□□□□ -0.77
PDLIM5-205ENST00000380180 BRK1Q8WUW1 75 aa10.11□□□□□ -0.79
PDLIM5-205ENST00000380180 SPTSSBQ8NFR3 76 aa10.11□□□□□ -0.79
PDLIM5-205ENST00000380180 A0A1B0GU69 56 aa10.09□□□□□ -0.79
PDLIM5-205ENST00000380180 SEC61BP60468 96 aaKnown RBP10.07□□□□□ -0.8
PDLIM5-205ENST00000380180 A6NED7 52 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms