RNA–Protein interactions for RNA: ENST00000379883.2

DDX58-202, Transcript of DExD/H-box helicase 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX58, Length 4,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-202ENST00000379883 A0A087WTM6 91 aa4.12□□□□□ -1.75
DDX58-202ENST00000379883 Q8N1X5 172 aa4.12□□□□□ -1.75
DDX58-202ENST00000379883 ALMS1Q8TCU4 4167 aa4.12□□□□□ -1.75
DDX58-202ENST00000379883 Q6ZSA8 131 aa4.11□□□□□ -1.75
DDX58-202ENST00000379883 H0YAA0 97 aa4.11□□□□□ -1.75
DDX58-202ENST00000379883 HIVEP1P15822 2718 aa4.1□□□□□ -1.75
DDX58-202ENST00000379883 KRTAP16-1A8MUX0 517 aa4.08□□□□□ -1.76
DDX58-202ENST00000379883 Q6ZRN7 208 aaPredicted RBP4.08□□□□□ -1.76
DDX58-202ENST00000379883 UBR5O95071 2799 aaPredicted RBP4.08□□□□□ -1.76
DDX58-202ENST00000379883 BAHCC1Q9P281 2608 aa4.08□□□□□ -1.76
DDX58-202ENST00000379883 ANK3Q12955 4377 aaKnown RBP4.07□□□□□ -1.76
DDX58-202ENST00000379883 J3QL48 77 aa4.07□□□□□ -1.76
DDX58-202ENST00000379883 KRTAP24-1Q3LI83 254 aa4.07□□□□□ -1.76
DDX58-202ENST00000379883 TENM2Q9NT68 2774 aa4.05□□□□□ -1.76
DDX58-202ENST00000379883 CUBNO60494 3623 aa4.05□□□□□ -1.76
DDX58-202ENST00000379883 CRIPTQ9P021 101 aa4.03□□□□□ -1.76
DDX58-202ENST00000379883 TYMSOSQ8TAI1 123 aa4.02□□□□□ -1.77
DDX58-202ENST00000379883 ATRQ13535 2644 aa4.02□□□□□ -1.77
DDX58-202ENST00000379883 RPL37P61927 97 aaKnown RBP4.02□□□□□ -1.77
DDX58-202ENST00000379883 TEP1Q99973 2627 aaKnown RBP4.01□□□□□ -1.77
DDX58-202ENST00000379883 P0C880 135 aa4□□□□□ -1.77
DDX58-202ENST00000379883 VWFP04275 2813 aa4□□□□□ -1.77
DDX58-202ENST00000379883 COX6B2Q6YFQ2 88 aa4□□□□□ -1.77
DDX58-202ENST00000379883 HELZ2Q9BYK8 2649 aaKnown RBP3.99□□□□□ -1.77
DDX58-202ENST00000379883 KRTAP13-2Q52LG2 175 aa3.98□□□□□ -1.77
DDX58-202ENST00000379883 KMT2BQ9UMN6 2715 aaPredicted RBP3.98□□□□□ -1.77
DDX58-202ENST00000379883 DNAH1Q9P2D7 4330 aa3.98□□□□□ -1.77
DDX58-202ENST00000379883 C20orf166-AS1Q96NR2 134 aa3.98□□□□□ -1.77
DDX58-202ENST00000379883 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
DDX58-202ENST00000379883 PDZD2O15018 2839 aa3.96□□□□□ -1.78
DDX58-202ENST00000379883 TENM3Q9P273 2699 aa3.96□□□□□ -1.78
DDX58-202ENST00000379883 SRRM2Q9UQ35 2752 aaKnown RBP3.96□□□□□ -1.78
DDX58-202ENST00000379883 MAST4O15021 2626 aa3.95□□□□□ -1.78
DDX58-202ENST00000379883 RPS29P62273 56 aaKnown RBP3.95□□□□□ -1.78
DDX58-202ENST00000379883 ZNF469Q96JG9 3925 aaPredicted RBP3.95□□□□□ -1.78
DDX58-202ENST00000379883 FASNP49327 2511 aaKnown RBP3.95□□□□□ -1.78
DDX58-202ENST00000379883 USP24Q9UPU5 2620 aa3.94□□□□□ -1.78
DDX58-202ENST00000379883 PKD1L1Q8TDX9 2849 aa3.94□□□□□ -1.78
DDX58-202ENST00000379883 FLNBO75369 2602 aaKnown RBP3.94□□□□□ -1.78
DDX58-202ENST00000379883 HECTD1Q9ULT8 2610 aa3.93□□□□□ -1.78
DDX58-202ENST00000379883 OTOGQ6ZRI0 2925 aa3.93□□□□□ -1.78
DDX58-202ENST00000379883 A0A0D9SG42 100 aa3.91□□□□□ -1.78
DDX58-202ENST00000379883 TENM1Q9UKZ4 2725 aa3.91□□□□□ -1.78
DDX58-202ENST00000379883 A0A0A0MQY5 61 aa3.89□□□□□ -1.79
DDX58-202ENST00000379883 NSD1Q96L73 2696 aaPredicted RBP3.89□□□□□ -1.79
DDX58-202ENST00000379883 C9orf92A6NGG3 77 aa3.88□□□□□ -1.79
DDX58-202ENST00000379883 KRTAP15-1Q3LI76 137 aa3.88□□□□□ -1.79
DDX58-202ENST00000379883 TPRXLQ17RH7 258 aa3.87□□□□□ -1.79
DDX58-202ENST00000379883 TENM4Q6N022 2769 aa3.87□□□□□ -1.79
DDX58-202ENST00000379883 KRTAP1-4P0C5Y4 121 aa3.87□□□□□ -1.79
DDX58-202ENST00000379883 ITPR2Q14571 2701 aa3.86□□□□□ -1.79
DDX58-202ENST00000379883 KRTAP3-1Q9BYR8 98 aa3.86□□□□□ -1.79
DDX58-202ENST00000379883 TRRAPQ9Y4A5 3859 aa3.84□□□□□ -1.79
DDX58-202ENST00000379883 FLG2Q5D862 2391 aaPredicted RBP3.84□□□□□ -1.8
DDX58-202ENST00000379883 S4R3F8 94 aa3.82□□□□□ -1.8
DDX58-202ENST00000379883 LUZP6Q538Z0 58 aa3.82□□□□□ -1.8
DDX58-202ENST00000379883 C10orf95Q9H7T3 257 aa3.82□□□□□ -1.8
DDX58-202ENST00000379883 DNAH10Q8IVF4 4471 aa3.82□□□□□ -1.8
DDX58-202ENST00000379883 NBEAL1Q6ZS30 2694 aa3.81□□□□□ -1.8
DDX58-202ENST00000379883 HUWE1Q7Z6Z7 4374 aaKnown RBP3.81□□□□□ -1.8
DDX58-202ENST00000379883 KRTAP10-2P60368 255 aa3.8□□□□□ -1.8
DDX58-202ENST00000379883 NOTCH1P46531 2555 aa3.8□□□□□ -1.8
DDX58-202ENST00000379883 KRTAP10-1P60331 282 aa3.79□□□□□ -1.8
DDX58-202ENST00000379883 TGP01266 2768 aa3.79□□□□□ -1.8
DDX58-202ENST00000379883 ANK2Q01484 3957 aa3.79□□□□□ -1.8
DDX58-202ENST00000379883 COL6A5A8TX70 2615 aa3.79□□□□□ -1.8
DDX58-202ENST00000379883 FBN1P35555 2871 aaKnown RBP3.78□□□□□ -1.8
DDX58-202ENST00000379883 DNAH3Q8TD57 4116 aa3.78□□□□□ -1.8
DDX58-202ENST00000379883 DNAH8Q96JB1 4490 aa3.77□□□□□ -1.81
DDX58-202ENST00000379883 STAB2Q8WWQ8 2551 aa3.77□□□□□ -1.81
DDX58-202ENST00000379883 KRTAP10-6P60371 365 aaPredicted RBP3.77□□□□□ -1.81
DDX58-202ENST00000379883 STAB1Q9NY15 2570 aa3.74□□□□□ -1.81
DDX58-202ENST00000379883 M0QZ58 72 aa3.74□□□□□ -1.81
DDX58-202ENST00000379883 KRTAP13-4Q3LI77 160 aa3.74□□□□□ -1.81
DDX58-202ENST00000379883 DNAH9Q9NYC9 4486 aa3.73□□□□□ -1.81
DDX58-202ENST00000379883 COL7A1Q02388 2944 aa3.71□□□□□ -1.82
DDX58-202ENST00000379883 XP32Q5T750 250 aa3.7□□□□□ -1.82
DDX58-202ENST00000379883 DYNC2H1Q8NCM8 4307 aaKnown RBP3.7□□□□□ -1.82
DDX58-202ENST00000379883 KRTAP12-2P59991 146 aa3.7□□□□□ -1.82
DDX58-202ENST00000379883 KRTAP3-2Q9BYR7 98 aa3.7□□□□□ -1.82
DDX58-202ENST00000379883 LYSTQ99698 3801 aa3.7□□□□□ -1.82
DDX58-202ENST00000379883 PLAC4Q8WY50 150 aa3.69□□□□□ -1.82
DDX58-202ENST00000379883 DNAH17Q9UFH2 4485 aa3.68□□□□□ -1.82
DDX58-202ENST00000379883 KRTAP12-1P59990 96 aa3.68□□□□□ -1.82
DDX58-202ENST00000379883 CMYA5Q8N3K9 4069 aa3.68□□□□□ -1.82
DDX58-202ENST00000379883 KRTAP3-3Q9BYR6 98 aa3.67□□□□□ -1.82
DDX58-202ENST00000379883 MGAM2Q2M2H8 2515 aa3.66□□□□□ -1.82
DDX58-202ENST00000379883 MEGF8Q7Z7M0 2845 aa3.66□□□□□ -1.82
DDX58-202ENST00000379883 CSMD3Q7Z407 3707 aa3.65□□□□□ -1.83
DDX58-202ENST00000379883 FRAS1Q86XX4 4008 aa3.64□□□□□ -1.83
DDX58-202ENST00000379883 HECTD4Q9Y4D8 3996 aa3.63□□□□□ -1.83
DDX58-202ENST00000379883 VPS13DQ5THJ4 4388 aa3.63□□□□□ -1.83
DDX58-202ENST00000379883 PLECQ15149 4684 aaKnown RBP3.62□□□□□ -1.83
DDX58-202ENST00000379883 SMR3BP02814 79 aaPredicted RBP3.61□□□□□ -1.83
DDX58-202ENST00000379883 PP632Q6XCG6 107 aa3.61□□□□□ -1.83
DDX58-202ENST00000379883 SEC61BP60468 96 aaKnown RBP3.6□□□□□ -1.83
DDX58-202ENST00000379883 DNAH2Q9P225 4427 aa3.59□□□□□ -1.84
DDX58-202ENST00000379883 R4GN34 69 aa3.58□□□□□ -1.84
DDX58-202ENST00000379883 DMBT1Q9UGM3 2413 aaPredicted RBP3.58□□□□□ -1.84
DDX58-202ENST00000379883 DNAH11Q96DT5 4516 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms