RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 SPRR1AP35321 89 aa6.7□□□□□ -1.34
PTCHD1-201ENST00000379361 Q8NDZ9 215 aa6.67□□□□□ -1.34
PTCHD1-201ENST00000379361 KRTAP10-1P60331 282 aa6.67□□□□□ -1.34
PTCHD1-201ENST00000379361 Q6ZR54 194 aa6.65□□□□□ -1.34
PTCHD1-201ENST00000379361 SPATA8Q6RVD6 105 aa6.65□□□□□ -1.35
PTCHD1-201ENST00000379361 A8MUU9 505 aa6.64□□□□□ -1.35
PTCHD1-201ENST00000379361 CELSR3Q9NYQ7 3312 aa6.64□□□□□ -1.35
PTCHD1-201ENST00000379361 MKI67P46013 3256 aaKnown RBP6.64□□□□□ -1.35
PTCHD1-201ENST00000379361 CFAP47Q6ZTR5 3102 aa6.64□□□□□ -1.35
PTCHD1-201ENST00000379361 MEGF8Q7Z7M0 2845 aa6.61□□□□□ -1.35
PTCHD1-201ENST00000379361 Q5XG85 94 aa6.61□□□□□ -1.35
PTCHD1-201ENST00000379361 RPS29P62273 56 aaKnown RBP6.58□□□□□ -1.36
PTCHD1-201ENST00000379361 KRTAP10-2P60368 255 aa6.58□□□□□ -1.36
PTCHD1-201ENST00000379361 KRTAP26-1Q6PEX3 210 aa6.57□□□□□ -1.36
PTCHD1-201ENST00000379361 CYSTM1Q9H1C7 97 aa6.57□□□□□ -1.36
PTCHD1-201ENST00000379361 TNP1P09430 55 aa6.57□□□□□ -1.36
PTCHD1-201ENST00000379361 AKAP9Q99996 3911 aa6.51□□□□□ -1.37
PTCHD1-201ENST00000379361 XIRP2A4UGR9 3374 aa6.48□□□□□ -1.37
PTCHD1-201ENST00000379361 KRTAP1-5Q9BYS1 174 aa6.48□□□□□ -1.37
PTCHD1-201ENST00000379361 C10orf95Q9H7T3 257 aa6.48□□□□□ -1.37
PTCHD1-201ENST00000379361 SPEGQ15772 3267 aa6.45□□□□□ -1.38
PTCHD1-201ENST00000379361 FBN1P35555 2871 aaKnown RBP6.44□□□□□ -1.38
PTCHD1-201ENST00000379361 KRTAP25-1Q3LHN0 102 aa6.44□□□□□ -1.38
PTCHD1-201ENST00000379361 PP632Q6XCG6 107 aa6.42□□□□□ -1.38
PTCHD1-201ENST00000379361 A0A087X002 238 aa6.4□□□□□ -1.38
PTCHD1-201ENST00000379361 EYSQ5T1H1 3165 aa6.4□□□□□ -1.39
PTCHD1-201ENST00000379361 HRNRQ86YZ3 2850 aaPredicted RBP6.4□□□□□ -1.39
PTCHD1-201ENST00000379361 NDUFAF8A1L188 74 aa6.39□□□□□ -1.39
PTCHD1-201ENST00000379361 P0C880 135 aa6.39□□□□□ -1.39
PTCHD1-201ENST00000379361 NBPF19A0A087WUL8 3843 aa6.37□□□□□ -1.39
PTCHD1-201ENST00000379361 VCANP13611 3396 aa6.36□□□□□ -1.39
PTCHD1-201ENST00000379361 PRO2289Q9P1D8 64 aa6.34□□□□□ -1.4
PTCHD1-201ENST00000379361 A8MU10 97 aa6.33□□□□□ -1.4
PTCHD1-201ENST00000379361 LAMA3Q16787 3333 aa6.31□□□□□ -1.4
PTCHD1-201ENST00000379361 KRTAP10-8P60410 259 aa6.3□□□□□ -1.4
PTCHD1-201ENST00000379361 DNAH14Q0VDD8 3507 aa6.3□□□□□ -1.4
PTCHD1-201ENST00000379361 NOTCH2NLQ7Z3S9 236 aa6.29□□□□□ -1.4
PTCHD1-201ENST00000379361 KRTAP29-1A8MX34 341 aaPredicted RBP6.28□□□□□ -1.4
PTCHD1-201ENST00000379361 KRTAP4-16G5E9R7 235 aaPredicted RBP6.28□□□□□ -1.4
PTCHD1-201ENST00000379361 BRCA2P51587 3418 aa6.26□□□□□ -1.41
PTCHD1-201ENST00000379361 ZFHX3Q15911 3703 aa6.26□□□□□ -1.41
PTCHD1-201ENST00000379361 Q6ZRN7 208 aaPredicted RBP6.25□□□□□ -1.41
PTCHD1-201ENST00000379361 UNC80Q8N2C7 3258 aa6.24□□□□□ -1.41
PTCHD1-201ENST00000379361 BSNQ9UPA5 3926 aa6.22□□□□□ -1.41
PTCHD1-201ENST00000379361 OTOGQ6ZRI0 2925 aa6.21□□□□□ -1.41
PTCHD1-201ENST00000379361 TRRAPQ9Y4A5 3859 aa6.19□□□□□ -1.42
PTCHD1-201ENST00000379361 A6NN06 94 aa6.18□□□□□ -1.42
PTCHD1-201ENST00000379361 USP34Q70CQ2 3546 aa6.15□□□□□ -1.42
PTCHD1-201ENST00000379361 FBN3Q75N90 2809 aa6.15□□□□□ -1.42
PTCHD1-201ENST00000379361 KRTAP10-10P60014 251 aa6.12□□□□□ -1.43
PTCHD1-201ENST00000379361 KRTAP11-1Q8IUC1 163 aa6.12□□□□□ -1.43
PTCHD1-201ENST00000379361 KRTAP21-3Q3LHN1 58 aa6.1□□□□□ -1.43
PTCHD1-201ENST00000379361 KRTAP13-2Q52LG2 175 aa6.1□□□□□ -1.43
PTCHD1-201ENST00000379361 TPRXLQ17RH7 258 aa6.06□□□□□ -1.44
PTCHD1-201ENST00000379361 SPTBN5Q9NRC6 3674 aaKnown RBP6.04□□□□□ -1.44
PTCHD1-201ENST00000379361 KRTAP13-1Q8IUC0 172 aa6.01□□□□□ -1.45
PTCHD1-201ENST00000379361 XP32Q5T750 250 aa5.99□□□□□ -1.45
PTCHD1-201ENST00000379361 SZT2Q5T011 3432 aa5.99□□□□□ -1.45
PTCHD1-201ENST00000379361 DNAH1Q9P2D7 4330 aa5.99□□□□□ -1.45
PTCHD1-201ENST00000379361 ZFHX4Q86UP3 3567 aa5.99□□□□□ -1.45
PTCHD1-201ENST00000379361 A0A1B0GVY2 172 aa5.98□□□□□ -1.45
PTCHD1-201ENST00000379361 CDH23Q9H251 3354 aa5.97□□□□□ -1.45
PTCHD1-201ENST00000379361 CMYA5Q8N3K9 4069 aa5.91□□□□□ -1.46
PTCHD1-201ENST00000379361 DNAH3Q8TD57 4116 aa5.89□□□□□ -1.47
PTCHD1-201ENST00000379361 H0YAA0 97 aa5.87□□□□□ -1.47
PTCHD1-201ENST00000379361 LOC400499M0QZD8 3231 aa5.87□□□□□ -1.47
PTCHD1-201ENST00000379361 KRTAP7-1Q8IUC3 87 aa5.86□□□□□ -1.47
PTCHD1-201ENST00000379361 LYSTQ99698 3801 aa5.86□□□□□ -1.47
PTCHD1-201ENST00000379361 ZNF469Q96JG9 3925 aaPredicted RBP5.86□□□□□ -1.47
PTCHD1-201ENST00000379361 MYO15AQ9UKN7 3530 aa5.84□□□□□ -1.47
PTCHD1-201ENST00000379361 DNAH7Q8WXX0 4024 aa5.82□□□□□ -1.48
PTCHD1-201ENST00000379361 LAMA5O15230 3695 aa5.79□□□□□ -1.48
PTCHD1-201ENST00000379361 DMDP11532 3685 aa5.78□□□□□ -1.48
PTCHD1-201ENST00000379361 DCHS1Q96JQ0 3298 aa5.77□□□□□ -1.49
PTCHD1-201ENST00000379361 VPS13CQ709C8 3753 aa5.77□□□□□ -1.49
PTCHD1-201ENST00000379361 WDFY3Q8IZQ1 3526 aa5.73□□□□□ -1.49
PTCHD1-201ENST00000379361 KRTAP1-4P0C5Y4 121 aa5.73□□□□□ -1.49
PTCHD1-201ENST00000379361 KRTAP13-3Q3SY46 172 aa5.71□□□□□ -1.49
PTCHD1-201ENST00000379361 HECTD4Q9Y4D8 3996 aa5.7□□□□□ -1.5
PTCHD1-201ENST00000379361 ANK2Q01484 3957 aa5.69□□□□□ -1.5
PTCHD1-201ENST00000379361 KRTAP12-2P59991 146 aa5.67□□□□□ -1.5
PTCHD1-201ENST00000379361 ALMS1Q8TCU4 4167 aa5.67□□□□□ -1.5
PTCHD1-201ENST00000379361 KRTAP15-1Q3LI76 137 aa5.63□□□□□ -1.51
PTCHD1-201ENST00000379361 KRTAP13-4Q3LI77 160 aa5.62□□□□□ -1.51
PTCHD1-201ENST00000379361 FRAS1Q86XX4 4008 aa5.6□□□□□ -1.51
PTCHD1-201ENST00000379361 SMG1Q96Q15 3661 aaKnown RBP5.58□□□□□ -1.52
PTCHD1-201ENST00000379361 KMT2AQ03164 3969 aa5.57□□□□□ -1.52
PTCHD1-201ENST00000379361 ASPMQ8IZT6 3477 aa5.56□□□□□ -1.52
PTCHD1-201ENST00000379361 SPENQ96T58 3664 aaKnown RBP5.51□□□□□ -1.53
PTCHD1-201ENST00000379361 FLGP20930 4061 aaPredicted RBP5.5□□□□□ -1.53
PTCHD1-201ENST00000379361 HUWE1Q7Z6Z7 4374 aaKnown RBP5.43□□□□□ -1.54
PTCHD1-201ENST00000379361 CSMD1Q96PZ7 3565 aa5.4□□□□□ -1.55
PTCHD1-201ENST00000379361 KRTAP12-1P59990 96 aa5.37□□□□□ -1.55
PTCHD1-201ENST00000379361 INE1O15225 51 aa5.37□□□□□ -1.55
PTCHD1-201ENST00000379361 DNAH2Q9P225 4427 aa5.37□□□□□ -1.55
PTCHD1-201ENST00000379361 DNAH6Q9C0G6 4158 aa5.36□□□□□ -1.55
PTCHD1-201ENST00000379361 PRKDCP78527 4128 aaKnown RBP5.3□□□□□ -1.56
PTCHD1-201ENST00000379361 KRTAP10-12P60413 245 aa5.29□□□□□ -1.56
PTCHD1-201ENST00000379361 RELNP78509 3460 aa5.28□□□□□ -1.56
PTCHD1-201ENST00000379361 CRCT1Q9UGL9 99 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms