RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 SPCS1Q9Y6A9 102 aa9.9□□□□□ -0.82
TMEM88B-201ENST00000378821 PDE6GP18545 87 aa9.89□□□□□ -0.83
TMEM88B-201ENST00000378821 C21orf62-AS1Q17RA5 79 aa9.89□□□□□ -0.83
TMEM88B-201ENST00000378821 C20orf166-AS1Q96NR2 134 aa9.89□□□□□ -0.83
TMEM88B-201ENST00000378821 CRCT1Q9UGL9 99 aa9.89□□□□□ -0.83
TMEM88B-201ENST00000378821 A8MUU9 505 aa9.87□□□□□ -0.83
TMEM88B-201ENST00000378821 PCP4L1A6NKN8 68 aa9.86□□□□□ -0.83
TMEM88B-201ENST00000378821 LINC00313P59037 77 aa9.86□□□□□ -0.83
TMEM88B-201ENST00000378821 NOTCH2NLQ7Z3S9 236 aa9.86□□□□□ -0.83
TMEM88B-201ENST00000378821 FLGP20930 4061 aaPredicted RBP9.85□□□□□ -0.83
TMEM88B-201ENST00000378821 KRTAP16-1A8MUX0 517 aa9.85□□□□□ -0.83
TMEM88B-201ENST00000378821 ATP11AUNQ6ZP68 121 aa9.85□□□□□ -0.83
TMEM88B-201ENST00000378821 FSIP2Q5CZC0 6907 aa9.84□□□□□ -0.83
TMEM88B-201ENST00000378821 IGHV6-1A0A0B4J1U7 121 aa9.84□□□□□ -0.83
TMEM88B-201ENST00000378821 A0A1B0GW54 56 aa9.84□□□□□ -0.83
TMEM88B-201ENST00000378821 COX6B2Q6YFQ2 88 aa9.84□□□□□ -0.83
TMEM88B-201ENST00000378821 A0A1B0GVX0 72 aa9.82□□□□□ -0.84
TMEM88B-201ENST00000378821 J3KT08 172 aa9.81□□□□□ -0.84
TMEM88B-201ENST00000378821 M0R2T5 61 aa9.8□□□□□ -0.84
TMEM88B-201ENST00000378821 SMCPP49901 116 aaPredicted RBP9.8□□□□□ -0.84
TMEM88B-201ENST00000378821 K7EP34 96 aa9.79□□□□□ -0.84
TMEM88B-201ENST00000378821 C8orf87E5RJ46 101 aa9.77□□□□□ -0.85
TMEM88B-201ENST00000378821 PRO0461Q9UI25 63 aa9.77□□□□□ -0.85
TMEM88B-201ENST00000378821 NREPQ16612 68 aa9.73□□□□□ -0.85
TMEM88B-201ENST00000378821 A8MWP4 228 aa9.72□□□□□ -0.85
TMEM88B-201ENST00000378821 NDUFB1O75438 58 aa9.71□□□□□ -0.86
TMEM88B-201ENST00000378821 IGKV3D-7A0A0C4DH55 119 aa9.7□□□□□ -0.86
TMEM88B-201ENST00000378821 GTF2H5Q6ZYL4 71 aa9.67□□□□□ -0.86
TMEM88B-201ENST00000378821 C8orf17Q9NRJ1 99 aa9.67□□□□□ -0.86
TMEM88B-201ENST00000378821 PRR15Q8IV56 129 aa9.64□□□□□ -0.87
TMEM88B-201ENST00000378821 Q6ZVQ6 151 aa9.61□□□□□ -0.87
TMEM88B-201ENST00000378821 K7EQZ3 153 aa9.6□□□□□ -0.87
TMEM88B-201ENST00000378821 Q8N9P0 234 aaPredicted RBP9.6□□□□□ -0.87
TMEM88B-201ENST00000378821 MMP24-AS1A0A0U1RRL7 71 aa9.59□□□□□ -0.87
TMEM88B-201ENST00000378821 BPY2O14599 106 aa9.58□□□□□ -0.88
TMEM88B-201ENST00000378821 KRTAP9-8Q9BYQ0 159 aa9.58□□□□□ -0.88
TMEM88B-201ENST00000378821 F8W1H4 67 aa9.57□□□□□ -0.88
TMEM88B-201ENST00000378821 ZCCHC13Q8WW36 166 aaKnown RBP9.57□□□□□ -0.88
TMEM88B-201ENST00000378821 LINC00846Q9NV44 126 aa9.55□□□□□ -0.88
TMEM88B-201ENST00000378821 ETDBQ3ZM63 59 aa9.54□□□□□ -0.88
TMEM88B-201ENST00000378821 TMEM254Q8TBM7 123 aa9.53□□□□□ -0.88
TMEM88B-201ENST00000378821 MPLKIPQ8TAP9 179 aa9.52□□□□□ -0.89
TMEM88B-201ENST00000378821 Q8N9L7 120 aa9.51□□□□□ -0.89
TMEM88B-201ENST00000378821 MRPL34Q9BQ48 92 aaKnown RBP9.51□□□□□ -0.89
TMEM88B-201ENST00000378821 hDV103S1A0JD37 113 aa9.5□□□□□ -0.89
TMEM88B-201ENST00000378821 HRES1P13985 223 aa9.5□□□□□ -0.89
TMEM88B-201ENST00000378821 UBL5Q9BZL1 73 aa9.5□□□□□ -0.89
TMEM88B-201ENST00000378821 WFDC13Q8IUB5 93 aa9.44□□□□□ -0.9
TMEM88B-201ENST00000378821 SPINK7P58062 85 aa9.43□□□□□ -0.9
TMEM88B-201ENST00000378821 NDUFS5O43920 106 aa9.42□□□□□ -0.9
TMEM88B-201ENST00000378821 RBM12B-AS1Q9P1G2 102 aa9.41□□□□□ -0.9
TMEM88B-201ENST00000378821 FAM236DA0A1B0GTK5 79 aa9.4□□□□□ -0.9
TMEM88B-201ENST00000378821 FAM236CP0DP71 79 aa9.4□□□□□ -0.9
TMEM88B-201ENST00000378821 CASC2Q6XLA1 102 aa9.4□□□□□ -0.9
TMEM88B-201ENST00000378821 MT2AP02795 61 aa9.39□□□□□ -0.91
TMEM88B-201ENST00000378821 A0A1B0GV90 55 aa9.34□□□□□ -0.91
TMEM88B-201ENST00000378821 HCG22E2RYF7 251 aa9.34□□□□□ -0.91
TMEM88B-201ENST00000378821 CXCL6P80162 114 aa9.32□□□□□ -0.92
TMEM88B-201ENST00000378821 Q5W150 140 aa9.32□□□□□ -0.92
TMEM88B-201ENST00000378821 USH2AO75445 5202 aa9.32□□□□□ -0.92
TMEM88B-201ENST00000378821 MT1FP04733 61 aa9.31□□□□□ -0.92
TMEM88B-201ENST00000378821 KRTAP9-3Q9BYQ3 159 aa9.28□□□□□ -0.92
TMEM88B-201ENST00000378821 FAM240AA0A1B0GVK7 77 aa9.27□□□□□ -0.93
TMEM88B-201ENST00000378821 ACYP1P07311 99 aa9.27□□□□□ -0.93
TMEM88B-201ENST00000378821 SSPOA2VEC9 5147 aa9.25□□□□□ -0.93
TMEM88B-201ENST00000378821 LCE2BO14633 110 aa9.25□□□□□ -0.93
TMEM88B-201ENST00000378821 IGKV2D-30A0A075B6S6 120 aa9.24□□□□□ -0.93
TMEM88B-201ENST00000378821 IGKV2-30P06310 120 aa9.24□□□□□ -0.93
TMEM88B-201ENST00000378821 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.22□□□□□ -0.93
TMEM88B-201ENST00000378821 KRTAP10-10P60014 251 aa9.22□□□□□ -0.93
TMEM88B-201ENST00000378821 C7orf65Q6ZTY9 151 aa9.22□□□□□ -0.93
TMEM88B-201ENST00000378821 ATP5EP2Q5VTU8 51 aa9.17□□□□□ -0.94
TMEM88B-201ENST00000378821 KRTAP9-7A8MTY7 169 aa9.13□□□□□ -0.95
TMEM88B-201ENST00000378821 KRTAP19-1Q8IUB9 90 aa9.12□□□□□ -0.95
TMEM88B-201ENST00000378821 TP53AIP1Q9HCN2 124 aa9.12□□□□□ -0.95
TMEM88B-201ENST00000378821 HIST1H4AP62805 103 aaKnown RBP9.09□□□□□ -0.95
TMEM88B-201ENST00000378821 FCGBPQ9Y6R7 5405 aaPredicted RBP9.09□□□□□ -0.95
TMEM88B-201ENST00000378821 LINC00643Q86TS7 51 aa9.08□□□□□ -0.96
TMEM88B-201ENST00000378821 H1FX-AS1Q4G0G2 97 aa9.07□□□□□ -0.96
TMEM88B-201ENST00000378821 C4orf26Q17RF5 130 aa9.05□□□□□ -0.96
TMEM88B-201ENST00000378821 A0A087WVE0 104 aa9.02□□□□□ -0.97
TMEM88B-201ENST00000378821 TRAV22A0A0B4J277 110 aa8.98□□□□□ -0.97
TMEM88B-201ENST00000378821 J3QR89 54 aa8.98□□□□□ -0.97
TMEM88B-201ENST00000378821 KRTAP19-6Q3LI70 58 aa8.97□□□□□ -0.97
TMEM88B-201ENST00000378821 KRTAP3-1Q9BYR8 98 aa8.94□□□□□ -0.98
TMEM88B-201ENST00000378821 CYP4F30PQ9H0H9 118 aa8.93□□□□□ -0.98
TMEM88B-201ENST00000378821 UQCRQO14949 82 aa8.92□□□□□ -0.98
TMEM88B-201ENST00000378821 C1orf64Q8NEQ6 169 aa8.91□□□□□ -0.98
TMEM88B-201ENST00000378821 LOC101927531A0A1B0GV80 90 aa8.9□□□□□ -0.98
TMEM88B-201ENST00000378821 H0Y9P7 68 aa8.88□□□□□ -0.99
TMEM88B-201ENST00000378821 ATOX1O00244 68 aa8.84□□□□□ -0.99
TMEM88B-201ENST00000378821 OCR1Q9BZK8 76 aa8.82□□□□□ -1
TMEM88B-201ENST00000378821 S4R3F8 94 aa8.82□□□□□ -1
TMEM88B-201ENST00000378821 C5orf47Q569G3 176 aa8.79□□□□□ -1
TMEM88B-201ENST00000378821 MACF1Q9UPN3 7388 aaKnown RBP8.79□□□□□ -1
TMEM88B-201ENST00000378821 LCA10Q71F78 164 aa8.77□□□□□ -1.01
TMEM88B-201ENST00000378821 K7ERU9 68 aa8.75□□□□□ -1.01
TMEM88B-201ENST00000378821 LINC00208Q96KT6 92 aa8.75□□□□□ -1.01
TMEM88B-201ENST00000378821 MP68P56378 58 aa8.72□□□□□ -1.01
TMEM88B-201ENST00000378821 MT-ATP8P03928 68 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms