RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 UBL5Q9BZL1 73 aa7.78□□□□□ -1.16
PRPF18-202ENST00000378572 SS18L2Q9UHA2 77 aa7.77□□□□□ -1.17
PRPF18-202ENST00000378572 HRCT1Q6UXD1 115 aa7.76□□□□□ -1.17
PRPF18-202ENST00000378572 SPINK1P00995 79 aa7.75□□□□□ -1.17
PRPF18-202ENST00000378572 RPS29P62273 56 aaKnown RBP7.75□□□□□ -1.17
PRPF18-202ENST00000378572 Q5XG85 94 aa7.75□□□□□ -1.17
PRPF18-202ENST00000378572 Q6ZVQ6 151 aa7.75□□□□□ -1.17
PRPF18-202ENST00000378572 NREPQ16612 68 aa7.74□□□□□ -1.17
PRPF18-202ENST00000378572 ASB16-AS1Q495Z4 193 aa7.73□□□□□ -1.17
PRPF18-202ENST00000378572 LINC00643Q86TS7 51 aa7.72□□□□□ -1.17
PRPF18-202ENST00000378572 ANAPC13Q9BS18 74 aa7.72□□□□□ -1.17
PRPF18-202ENST00000378572 LIMD2Q9BT23 127 aa7.72□□□□□ -1.17
PRPF18-202ENST00000378572 KRTAP4-8Q9BYQ9 185 aa7.72□□□□□ -1.17
PRPF18-202ENST00000378572 KRTAP13-3Q3SY46 172 aa7.71□□□□□ -1.18
PRPF18-202ENST00000378572 LINC00472Q9H8W2 130 aa7.69□□□□□ -1.18
PRPF18-202ENST00000378572 LORP23490 312 aaPredicted RBP7.69□□□□□ -1.18
PRPF18-202ENST00000378572 ATP5EP2Q5VTU8 51 aa7.69□□□□□ -1.18
PRPF18-202ENST00000378572 SEC61BP60468 96 aaKnown RBP7.68□□□□□ -1.18
PRPF18-202ENST00000378572 Q96NJ1 140 aa7.67□□□□□ -1.18
PRPF18-202ENST00000378572 CXCL6P80162 114 aa7.66□□□□□ -1.18
PRPF18-202ENST00000378572 BPY2O14599 106 aa7.66□□□□□ -1.18
PRPF18-202ENST00000378572 J3KT08 172 aa7.65□□□□□ -1.18
PRPF18-202ENST00000378572 KRTAP9-6A0A140TA67 174 aa7.64□□□□□ -1.19
PRPF18-202ENST00000378572 C1orf195Q5TG92 126 aa7.62□□□□□ -1.19
PRPF18-202ENST00000378572 IGKV3D-7A0A0C4DH55 119 aa7.61□□□□□ -1.19
PRPF18-202ENST00000378572 CCDC179H3BU77 68 aa7.61□□□□□ -1.19
PRPF18-202ENST00000378572 DSCR10P59022 87 aa7.61□□□□□ -1.19
PRPF18-202ENST00000378572 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.6□□□□□ -1.19
PRPF18-202ENST00000378572 IGKV4-1P06312 121 aa7.6□□□□□ -1.19
PRPF18-202ENST00000378572 DEFB116Q30KQ4 102 aa7.6□□□□□ -1.19
PRPF18-202ENST00000378572 IMUPQ9GZP8 106 aa7.6□□□□□ -1.19
PRPF18-202ENST00000378572 A8MWP4 228 aa7.58□□□□□ -1.2
PRPF18-202ENST00000378572 KRTAP4-1Q9BYQ7 146 aa7.58□□□□□ -1.2
PRPF18-202ENST00000378572 NDUFB1O75438 58 aa7.56□□□□□ -1.2
PRPF18-202ENST00000378572 XP32Q5T750 250 aa7.56□□□□□ -1.2
PRPF18-202ENST00000378572 K7EQZ3 153 aa7.55□□□□□ -1.2
PRPF18-202ENST00000378572 PRR15Q8IV56 129 aa7.55□□□□□ -1.2
PRPF18-202ENST00000378572 A0A1B0GVX0 72 aa7.52□□□□□ -1.2
PRPF18-202ENST00000378572 HIST1H4AP62805 103 aaKnown RBP7.52□□□□□ -1.2
PRPF18-202ENST00000378572 Q8N9L7 120 aa7.52□□□□□ -1.2
PRPF18-202ENST00000378572 C9orf92A6NGG3 77 aa7.51□□□□□ -1.21
PRPF18-202ENST00000378572 SMIM20Q8N5G0 67 aa7.49□□□□□ -1.21
PRPF18-202ENST00000378572 C8orf87E5RJ46 101 aa7.49□□□□□ -1.21
PRPF18-202ENST00000378572 PCOTHQ58A44 107 aa7.48□□□□□ -1.21
PRPF18-202ENST00000378572 A0A087WVE0 104 aa7.47□□□□□ -1.21
PRPF18-202ENST00000378572 IGHV6-1A0A0B4J1U7 121 aa7.47□□□□□ -1.21
PRPF18-202ENST00000378572 C8orf17Q9NRJ1 99 aa7.47□□□□□ -1.21
PRPF18-202ENST00000378572 MMP24-AS1A0A0U1RRL7 71 aa7.45□□□□□ -1.22
PRPF18-202ENST00000378572 HCG22E2RYF7 251 aa7.45□□□□□ -1.22
PRPF18-202ENST00000378572 FAM236AA0A1B0GUQ0 79 aa7.44□□□□□ -1.22
PRPF18-202ENST00000378572 FAM236BA0A1B0GV22 79 aa7.44□□□□□ -1.22
PRPF18-202ENST00000378572 UQCRQO14949 82 aa7.44□□□□□ -1.22
PRPF18-202ENST00000378572 LINC00313P59037 77 aa7.43□□□□□ -1.22
PRPF18-202ENST00000378572 CASC2Q6XLA1 102 aa7.41□□□□□ -1.22
PRPF18-202ENST00000378572 NOTCH2NLQ7Z3S9 236 aa7.41□□□□□ -1.22
PRPF18-202ENST00000378572 hDV103S1A0JD37 113 aa7.41□□□□□ -1.22
PRPF18-202ENST00000378572 TMEM254Q8TBM7 123 aa7.41□□□□□ -1.22
PRPF18-202ENST00000378572 WFDC13Q8IUB5 93 aa7.4□□□□□ -1.23
PRPF18-202ENST00000378572 COX7CP15954 63 aa7.38□□□□□ -1.23
PRPF18-202ENST00000378572 KRTAP16-1A8MUX0 517 aa7.38□□□□□ -1.23
PRPF18-202ENST00000378572 MRPL34Q9BQ48 92 aaKnown RBP7.38□□□□□ -1.23
PRPF18-202ENST00000378572 MT1HP80294 61 aa7.37□□□□□ -1.23
PRPF18-202ENST00000378572 CRCT1Q9UGL9 99 aa7.37□□□□□ -1.23
PRPF18-202ENST00000378572 FSIP2Q5CZC0 6907 aa7.36□□□□□ -1.23
PRPF18-202ENST00000378572 ATOX1O00244 68 aa7.35□□□□□ -1.23
PRPF18-202ENST00000378572 RPS28P62857 69 aaKnown RBP7.35□□□□□ -1.23
PRPF18-202ENST00000378572 M0R2T5 61 aa7.35□□□□□ -1.23
PRPF18-202ENST00000378572 KRTAP19-2Q3LHN2 52 aa7.35□□□□□ -1.23
PRPF18-202ENST00000378572 COX6B2Q6YFQ2 88 aa7.35□□□□□ -1.23
PRPF18-202ENST00000378572 Q8N9P0 234 aaPredicted RBP7.33□□□□□ -1.24
PRPF18-202ENST00000378572 RPL37P61927 97 aaKnown RBP7.31□□□□□ -1.24
PRPF18-202ENST00000378572 OCR1Q9BZK8 76 aa7.3□□□□□ -1.24
PRPF18-202ENST00000378572 LCE3BQ5TA77 95 aa7.3□□□□□ -1.24
PRPF18-202ENST00000378572 C20orf166-AS1Q96NR2 134 aa7.3□□□□□ -1.24
PRPF18-202ENST00000378572 A8MUU9 505 aa7.29□□□□□ -1.24
PRPF18-202ENST00000378572 TP53AIP1Q9HCN2 124 aa7.29□□□□□ -1.24
PRPF18-202ENST00000378572 SERP2Q8N6R1 65 aa7.28□□□□□ -1.24
PRPF18-202ENST00000378572 TMEM258P61165 79 aa7.27□□□□□ -1.25
PRPF18-202ENST00000378572 TRAV7A0A075B6U4 112 aa7.27□□□□□ -1.25
PRPF18-202ENST00000378572 NDUFS5O43920 106 aa7.27□□□□□ -1.25
PRPF18-202ENST00000378572 KRTAP4-8A0A0G2JLE6 195 aa7.26□□□□□ -1.25
PRPF18-202ENST00000378572 KRTAP10-6P60371 365 aaPredicted RBP7.26□□□□□ -1.25
PRPF18-202ENST00000378572 Q75L30 129 aa7.26□□□□□ -1.25
PRPF18-202ENST00000378572 C5orf47Q569G3 176 aa7.25□□□□□ -1.25
PRPF18-202ENST00000378572 CYSTM1Q9H1C7 97 aa7.25□□□□□ -1.25
PRPF18-202ENST00000378572 TRAV22A0A0B4J277 110 aa7.18□□□□□ -1.26
PRPF18-202ENST00000378572 ATP11AUNQ6ZP68 121 aa7.18□□□□□ -1.26
PRPF18-202ENST00000378572 ZCCHC13Q8WW36 166 aaKnown RBP7.18□□□□□ -1.26
PRPF18-202ENST00000378572 KRTAP9-9Q9BYP9 154 aa7.18□□□□□ -1.26
PRPF18-202ENST00000378572 KRTAP9-4Q9BYQ2 154 aa7.18□□□□□ -1.26
PRPF18-202ENST00000378572 Q5W150 140 aa7.16□□□□□ -1.26
PRPF18-202ENST00000378572 MP68P56378 58 aa7.15□□□□□ -1.26
PRPF18-202ENST00000378572 H0Y9P7 68 aa7.15□□□□□ -1.27
PRPF18-202ENST00000378572 H3BPC8 53 aa7.15□□□□□ -1.27
PRPF18-202ENST00000378572 FLGP20930 4061 aaPredicted RBP7.13□□□□□ -1.27
PRPF18-202ENST00000378572 LINC00208Q96KT6 92 aa7.09□□□□□ -1.27
PRPF18-202ENST00000378572 LOC101927531A0A1B0GV80 90 aa7.08□□□□□ -1.28
PRPF18-202ENST00000378572 KLKP1Q107X0 134 aa7.08□□□□□ -1.28
PRPF18-202ENST00000378572 C20orf197Q8N268 126 aa7.08□□□□□ -1.28
PRPF18-202ENST00000378572 C1orf64Q8NEQ6 169 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms