RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 Q8N9P0 234 aaPredicted RBP7.92□□□□□ -1.14
NPHP4-203ENST00000378169 TGP01266 2768 aa7.91□□□□□ -1.14
NPHP4-203ENST00000378169 UQCR11O14957 56 aa7.9□□□□□ -1.14
NPHP4-203ENST00000378169 FAM229BQ4G0N7 80 aa7.9□□□□□ -1.14
NPHP4-203ENST00000378169 HRES1P13985 223 aa7.88□□□□□ -1.15
NPHP4-203ENST00000378169 Q6ZRN7 208 aaPredicted RBP7.88□□□□□ -1.15
NPHP4-203ENST00000378169 IGLV7-46A0A075B6I9 117 aa7.87□□□□□ -1.15
NPHP4-203ENST00000378169 FP248Q71RG6 208 aaPredicted RBP7.84□□□□□ -1.15
NPHP4-203ENST00000378169 A0A087X002 238 aa7.83□□□□□ -1.16
NPHP4-203ENST00000378169 MIR22HGQ0VDD5 57 aa7.83□□□□□ -1.16
NPHP4-203ENST00000378169 OXTP01178 125 aa7.82□□□□□ -1.16
NPHP4-203ENST00000378169 LINC00483Q53H64 154 aa7.8□□□□□ -1.16
NPHP4-203ENST00000378169 Q5XG85 94 aa7.8□□□□□ -1.16
NPHP4-203ENST00000378169 Q5W150 140 aa7.79□□□□□ -1.16
NPHP4-203ENST00000378169 LCE6AA0A183 80 aa7.78□□□□□ -1.16
NPHP4-203ENST00000378169 Q1T7F1 81 aa7.78□□□□□ -1.16
NPHP4-203ENST00000378169 NOTCH2NLQ7Z3S9 236 aa7.77□□□□□ -1.16
NPHP4-203ENST00000378169 COX6B2Q6YFQ2 88 aa7.76□□□□□ -1.17
NPHP4-203ENST00000378169 ANK3Q12955 4377 aaKnown RBP7.76□□□□□ -1.17
NPHP4-203ENST00000378169 KRTAP29-1A8MX34 341 aaPredicted RBP7.76□□□□□ -1.17
NPHP4-203ENST00000378169 ZCCHC13Q8WW36 166 aaKnown RBP7.74□□□□□ -1.17
NPHP4-203ENST00000378169 SRRM2Q9UQ35 2752 aaKnown RBP7.73□□□□□ -1.17
NPHP4-203ENST00000378169 A0A0D9SG42 100 aa7.7□□□□□ -1.18
NPHP4-203ENST00000378169 AKAP9Q99996 3911 aa7.7□□□□□ -1.18
NPHP4-203ENST00000378169 CDC42SE1Q9NRR8 79 aa7.68□□□□□ -1.18
NPHP4-203ENST00000378169 SPINK7P58062 85 aa7.68□□□□□ -1.18
NPHP4-203ENST00000378169 Q5VSD8 79 aa7.68□□□□□ -1.18
NPHP4-203ENST00000378169 KRTAP13-1Q8IUC0 172 aa7.68□□□□□ -1.18
NPHP4-203ENST00000378169 RBM12B-AS1Q9P1G2 102 aa7.67□□□□□ -1.18
NPHP4-203ENST00000378169 LINC01554Q52M75 96 aa7.66□□□□□ -1.18
NPHP4-203ENST00000378169 Q6ZSA8 131 aa7.66□□□□□ -1.18
NPHP4-203ENST00000378169 LINC01558Q9Y6Z2 57 aa7.63□□□□□ -1.19
NPHP4-203ENST00000378169 Q5VV11 94 aa7.63□□□□□ -1.19
NPHP4-203ENST00000378169 Q75L30 129 aa7.61□□□□□ -1.19
NPHP4-203ENST00000378169 KRTAP13-2Q52LG2 175 aa7.6□□□□□ -1.19
NPHP4-203ENST00000378169 SPINT4Q6UDR6 99 aa7.59□□□□□ -1.19
NPHP4-203ENST00000378169 A0A1B0GU33 70 aa7.58□□□□□ -1.2
NPHP4-203ENST00000378169 KTN1-AS1Q86SY8 53 aa7.58□□□□□ -1.2
NPHP4-203ENST00000378169 DMAC1Q96GE9 116 aa7.54□□□□□ -1.2
NPHP4-203ENST00000378169 FBN3Q75N90 2809 aa7.49□□□□□ -1.21
NPHP4-203ENST00000378169 ASB16-AS1Q495Z4 193 aa7.48□□□□□ -1.21
NPHP4-203ENST00000378169 CRIPTQ9P021 101 aa7.47□□□□□ -1.21
NPHP4-203ENST00000378169 LCA10Q71F78 164 aa7.44□□□□□ -1.22
NPHP4-203ENST00000378169 CSAG1Q6PB30 78 aa7.44□□□□□ -1.22
NPHP4-203ENST00000378169 S4R3F8 94 aa7.43□□□□□ -1.22
NPHP4-203ENST00000378169 PRAC1Q96KF2 57 aa7.42□□□□□ -1.22
NPHP4-203ENST00000378169 CSMD3Q7Z407 3707 aa7.39□□□□□ -1.23
NPHP4-203ENST00000378169 KRTAP21-3Q3LHN1 58 aa7.39□□□□□ -1.23
NPHP4-203ENST00000378169 COL7A1Q02388 2944 aa7.36□□□□□ -1.23
NPHP4-203ENST00000378169 KRTAP1-4P0C5Y4 121 aa7.34□□□□□ -1.23
NPHP4-203ENST00000378169 SEC61BP60468 96 aaKnown RBP7.33□□□□□ -1.24
NPHP4-203ENST00000378169 M0R2T5 61 aa7.33□□□□□ -1.24
NPHP4-203ENST00000378169 RPS29P62273 56 aaKnown RBP7.33□□□□□ -1.24
NPHP4-203ENST00000378169 MEGF8Q7Z7M0 2845 aa7.33□□□□□ -1.24
NPHP4-203ENST00000378169 A8MU10 97 aa7.32□□□□□ -1.24
NPHP4-203ENST00000378169 SPATA8Q6RVD6 105 aa7.32□□□□□ -1.24
NPHP4-203ENST00000378169 CAMK2N1Q7Z7J9 78 aa7.3□□□□□ -1.24
NPHP4-203ENST00000378169 R4GN34 69 aa7.29□□□□□ -1.24
NPHP4-203ENST00000378169 H1FX-AS1Q4G0G2 97 aa7.26□□□□□ -1.25
NPHP4-203ENST00000378169 RPL37P61927 97 aaKnown RBP7.22□□□□□ -1.25
NPHP4-203ENST00000378169 ADM2Q7Z4H4 148 aa7.2□□□□□ -1.26
NPHP4-203ENST00000378169 M0QZ58 72 aa7.19□□□□□ -1.26
NPHP4-203ENST00000378169 A8MUU9 505 aa7.17□□□□□ -1.26
NPHP4-203ENST00000378169 C20orf166-AS1Q96NR2 134 aa7.15□□□□□ -1.26
NPHP4-203ENST00000378169 HUWE1Q7Z6Z7 4374 aaKnown RBP7.08□□□□□ -1.28
NPHP4-203ENST00000378169 KRTAP16-1A8MUX0 517 aa7.08□□□□□ -1.28
NPHP4-203ENST00000378169 ROMO1P60602 79 aa7.07□□□□□ -1.28
NPHP4-203ENST00000378169 A6NN06 94 aa7.06□□□□□ -1.28
NPHP4-203ENST00000378169 XP32Q5T750 250 aa7.03□□□□□ -1.28
NPHP4-203ENST00000378169 ANK2Q01484 3957 aa7.03□□□□□ -1.28
NPHP4-203ENST00000378169 DNHD1Q96M86 4753 aa7.01□□□□□ -1.29
NPHP4-203ENST00000378169 A0A1B0GVY2 172 aa6.95□□□□□ -1.3
NPHP4-203ENST00000378169 LUZP6Q538Z0 58 aa6.93□□□□□ -1.3
NPHP4-203ENST00000378169 KRTAP13-3Q3SY46 172 aa6.92□□□□□ -1.3
NPHP4-203ENST00000378169 DNAH9Q9NYC9 4486 aa6.89□□□□□ -1.31
NPHP4-203ENST00000378169 DNAH10Q8IVF4 4471 aa6.89□□□□□ -1.31
NPHP4-203ENST00000378169 KRTAP10-8P60410 259 aa6.86□□□□□ -1.31
NPHP4-203ENST00000378169 PRKDCP78527 4128 aaKnown RBP6.85□□□□□ -1.31
NPHP4-203ENST00000378169 PLECQ15149 4684 aaKnown RBP6.85□□□□□ -1.31
NPHP4-203ENST00000378169 CMYA5Q8N3K9 4069 aa6.85□□□□□ -1.31
NPHP4-203ENST00000378169 H0YAA0 97 aa6.82□□□□□ -1.32
NPHP4-203ENST00000378169 KRTAP25-1Q3LHN0 102 aa6.82□□□□□ -1.32
NPHP4-203ENST00000378169 TPRXLQ17RH7 258 aa6.82□□□□□ -1.32
NPHP4-203ENST00000378169 PLAC4Q8WY50 150 aa6.8□□□□□ -1.32
NPHP4-203ENST00000378169 P0C880 135 aa6.76□□□□□ -1.33
NPHP4-203ENST00000378169 LYSTQ99698 3801 aa6.73□□□□□ -1.33
NPHP4-203ENST00000378169 DNAH3Q8TD57 4116 aa6.73□□□□□ -1.33
NPHP4-203ENST00000378169 STARD9Q9P2P6 4700 aa6.72□□□□□ -1.33
NPHP4-203ENST00000378169 H3BS24 57 aa6.7□□□□□ -1.34
NPHP4-203ENST00000378169 DNAH11Q96DT5 4516 aa6.7□□□□□ -1.34
NPHP4-203ENST00000378169 DNAH1Q9P2D7 4330 aa6.68□□□□□ -1.34
NPHP4-203ENST00000378169 C10orf95Q9H7T3 257 aa6.68□□□□□ -1.34
NPHP4-203ENST00000378169 KRTAP3-1Q9BYR8 98 aa6.64□□□□□ -1.35
NPHP4-203ENST00000378169 KMT2AQ03164 3969 aa6.6□□□□□ -1.35
NPHP4-203ENST00000378169 DNAH7Q8WXX0 4024 aa6.59□□□□□ -1.35
NPHP4-203ENST00000378169 DNAH5Q8TE73 4624 aa6.55□□□□□ -1.36
NPHP4-203ENST00000378169 TNP1P09430 55 aa6.55□□□□□ -1.36
NPHP4-203ENST00000378169 VPS13DQ5THJ4 4388 aa6.54□□□□□ -1.36
NPHP4-203ENST00000378169 FAT1Q14517 4588 aa6.5□□□□□ -1.37
NPHP4-203ENST00000378169 NDUFAF8A1L188 74 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms