RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 KMT2AQ03164 3969 aa10.71□□□□□ -0.7
GNE-201ENST00000377902 HRES1P13985 223 aa10.71□□□□□ -0.7
GNE-201ENST00000377902 CDK2AP2O75956 126 aa10.7□□□□□ -0.7
GNE-201ENST00000377902 SPINK6Q6UWN8 80 aa10.7□□□□□ -0.7
GNE-201ENST00000377902 DNAH17Q9UFH2 4485 aa10.68□□□□□ -0.7
GNE-201ENST00000377902 IGLV5-52A0A0A0MRZ9 124 aa10.66□□□□□ -0.7
GNE-201ENST00000377902 Q5W150 140 aa10.66□□□□□ -0.7
GNE-201ENST00000377902 DNAH2Q9P225 4427 aa10.66□□□□□ -0.7
GNE-201ENST00000377902 A0A087WTM6 91 aa10.66□□□□□ -0.7
GNE-201ENST00000377902 VPS13DQ5THJ4 4388 aa10.64□□□□□ -0.71
GNE-201ENST00000377902 LINC01558Q9Y6Z2 57 aa10.63□□□□□ -0.71
GNE-201ENST00000377902 FBN3Q75N90 2809 aa10.63□□□□□ -0.71
GNE-201ENST00000377902 RTL8CO15255 209 aa10.62□□□□□ -0.71
GNE-201ENST00000377902 ZNF706Q9Y5V0 76 aaPredicted RBP10.62□□□□□ -0.71
GNE-201ENST00000377902 ZNF861PO60384 105 aa10.62□□□□□ -0.71
GNE-201ENST00000377902 PLAC8Q9NZF1 115 aa10.62□□□□□ -0.71
GNE-201ENST00000377902 SPINK7P58062 85 aa10.61□□□□□ -0.71
GNE-201ENST00000377902 PRR26Q8N8Z3 221 aa10.6□□□□□ -0.71
GNE-201ENST00000377902 TGP01266 2768 aa10.59□□□□□ -0.71
GNE-201ENST00000377902 ATP11AUNQ6ZP68 121 aa10.59□□□□□ -0.71
GNE-201ENST00000377902 CIRBP-AS1Q8TBR5 109 aa10.58□□□□□ -0.72
GNE-201ENST00000377902 NUPR2A6NF83 97 aa10.57□□□□□ -0.72
GNE-201ENST00000377902 CDC42SE1Q9NRR8 79 aa10.57□□□□□ -0.72
GNE-201ENST00000377902 MEGF8Q7Z7M0 2845 aa10.54□□□□□ -0.72
GNE-201ENST00000377902 PRKDCP78527 4128 aaKnown RBP10.54□□□□□ -0.72
GNE-201ENST00000377902 KRTAP13-3Q3SY46 172 aa10.54□□□□□ -0.72
GNE-201ENST00000377902 A6NN06 94 aa10.53□□□□□ -0.72
GNE-201ENST00000377902 ALMS1Q8TCU4 4167 aa10.53□□□□□ -0.72
GNE-201ENST00000377902 KTN1-AS1Q86SY8 53 aa10.53□□□□□ -0.72
GNE-201ENST00000377902 RETNLBQ9BQ08 111 aa10.52□□□□□ -0.73
GNE-201ENST00000377902 DNAH6Q9C0G6 4158 aa10.52□□□□□ -0.73
GNE-201ENST00000377902 IGLV7-43P04211 117 aa10.47□□□□□ -0.73
GNE-201ENST00000377902 DNAH11Q96DT5 4516 aa10.44□□□□□ -0.74
GNE-201ENST00000377902 RBM12B-AS1Q9P1G2 102 aa10.41□□□□□ -0.74
GNE-201ENST00000377902 ACYP2P14621 99 aa10.4□□□□□ -0.74
GNE-201ENST00000377902 LINC00313P59037 77 aa10.36□□□□□ -0.75
GNE-201ENST00000377902 DNAH5Q8TE73 4624 aa10.35□□□□□ -0.75
GNE-201ENST00000377902 DMAC1Q96GE9 116 aa10.34□□□□□ -0.75
GNE-201ENST00000377902 C8orf87E5RJ46 101 aa10.32□□□□□ -0.76
GNE-201ENST00000377902 C1orf134Q5TEV5 83 aa10.32□□□□□ -0.76
GNE-201ENST00000377902 SSBP3-AS1Q7Z2R9 100 aa10.32□□□□□ -0.76
GNE-201ENST00000377902 C7orf65Q6ZTY9 151 aa10.31□□□□□ -0.76
GNE-201ENST00000377902 KRTAP13-2Q52LG2 175 aa10.3□□□□□ -0.76
GNE-201ENST00000377902 LRP1BQ9NZR2 4599 aa10.3□□□□□ -0.76
GNE-201ENST00000377902 KRTAP10-2P60368 255 aa10.29□□□□□ -0.76
GNE-201ENST00000377902 DNHD1Q96M86 4753 aa10.28□□□□□ -0.76
GNE-201ENST00000377902 FAM229AH3BQW9 127 aa10.27□□□□□ -0.76
GNE-201ENST00000377902 IGKV2-30P06310 120 aa10.27□□□□□ -0.77
GNE-201ENST00000377902 LY6G6CO95867 125 aa10.25□□□□□ -0.77
GNE-201ENST00000377902 A0A1B0GU69 56 aa10.24□□□□□ -0.77
GNE-201ENST00000377902 KRTAP16-1A8MUX0 517 aa10.23□□□□□ -0.77
GNE-201ENST00000377902 IGKV2D-30A0A075B6S6 120 aa10.22□□□□□ -0.77
GNE-201ENST00000377902 PRAC1Q96KF2 57 aa10.21□□□□□ -0.78
GNE-201ENST00000377902 ADM2Q7Z4H4 148 aa10.21□□□□□ -0.78
GNE-201ENST00000377902 VPS13BQ7Z7G8 4022 aa10.17□□□□□ -0.78
GNE-201ENST00000377902 PKD1P98161 4303 aa10.14□□□□□ -0.79
GNE-201ENST00000377902 KRTAP10-1P60331 282 aa10.13□□□□□ -0.79
GNE-201ENST00000377902 HYDINQ4G0P3 5121 aa10.13□□□□□ -0.79
GNE-201ENST00000377902 KRTAP1-4P0C5Y4 121 aa10.11□□□□□ -0.79
GNE-201ENST00000377902 SPATA8Q6RVD6 105 aa10.11□□□□□ -0.79
GNE-201ENST00000377902 FAT2Q9NYQ8 4349 aa10.11□□□□□ -0.79
GNE-201ENST00000377902 MIR22HGQ0VDD5 57 aa10.09□□□□□ -0.79
GNE-201ENST00000377902 SPINK1P00995 79 aa10.07□□□□□ -0.8
GNE-201ENST00000377902 UQCR11O14957 56 aa10.05□□□□□ -0.8
GNE-201ENST00000377902 Q8N1X5 172 aa10.04□□□□□ -0.8
GNE-201ENST00000377902 Q6ZSA8 131 aa10.03□□□□□ -0.8
GNE-201ENST00000377902 PLA2G1BP04054 148 aaKnown RBP10.02□□□□□ -0.81
GNE-201ENST00000377902 C4orf48Q5BLP8 95 aa9.98□□□□□ -0.81
GNE-201ENST00000377902 TYMSOSQ8TAI1 123 aa9.98□□□□□ -0.81
GNE-201ENST00000377902 PKHD1P08F94 4074 aa9.91□□□□□ -0.82
GNE-201ENST00000377902 C9orf92A6NGG3 77 aa9.83□□□□□ -0.84
GNE-201ENST00000377902 CSAG1Q6PB30 78 aa9.82□□□□□ -0.84
GNE-201ENST00000377902 LINC01554Q52M75 96 aa9.81□□□□□ -0.84
GNE-201ENST00000377902 LINC00304Q8N9R0 145 aa9.8□□□□□ -0.84
GNE-201ENST00000377902 H0YAA0 97 aa9.76□□□□□ -0.85
GNE-201ENST00000377902 SMR3BP02814 79 aaPredicted RBP9.76□□□□□ -0.85
GNE-201ENST00000377902 KRTAP3-1Q9BYR8 98 aa9.75□□□□□ -0.85
GNE-201ENST00000377902 FAT1Q14517 4588 aa9.73□□□□□ -0.85
GNE-201ENST00000377902 SACSQ9NZJ4 4579 aa9.7□□□□□ -0.86
GNE-201ENST00000377902 DYNC1H1Q14204 4646 aaKnown RBP9.65□□□□□ -0.87
GNE-201ENST00000377902 A8MUU9 505 aa9.64□□□□□ -0.87
GNE-201ENST00000377902 C20orf166-AS1Q96NR2 134 aa9.64□□□□□ -0.87
GNE-201ENST00000377902 A0A1B0GU33 70 aa9.63□□□□□ -0.87
GNE-201ENST00000377902 RPS29P62273 56 aaKnown RBP9.63□□□□□ -0.87
GNE-201ENST00000377902 FLG2Q5D862 2391 aaPredicted RBP9.59□□□□□ -0.87
GNE-201ENST00000377902 PKHD1L1Q86WI1 4243 aa9.59□□□□□ -0.87
GNE-201ENST00000377902 H1FX-AS1Q4G0G2 97 aa9.57□□□□□ -0.88
GNE-201ENST00000377902 APOBP04114 4563 aaKnown RBP9.54□□□□□ -0.88
GNE-201ENST00000377902 CRIPTQ9P021 101 aa9.49□□□□□ -0.89
GNE-201ENST00000377902 KRTAP10-4P60372 401 aaPredicted RBP9.48□□□□□ -0.89
GNE-201ENST00000377902 KRTAP25-1Q3LHN0 102 aa9.45□□□□□ -0.9
GNE-201ENST00000377902 COX6B2Q6YFQ2 88 aa9.45□□□□□ -0.9
GNE-201ENST00000377902 LRP1Q07954 4544 aaKnown RBP9.4□□□□□ -0.91
GNE-201ENST00000377902 DMBT1Q9UGM3 2413 aaPredicted RBP9.37□□□□□ -0.91
GNE-201ENST00000377902 HSPG2P98160 4391 aa9.37□□□□□ -0.91
GNE-201ENST00000377902 FAT3Q8TDW7 4589 aa9.35□□□□□ -0.91
GNE-201ENST00000377902 A0A1B0GVY2 172 aa9.33□□□□□ -0.92
GNE-201ENST00000377902 MYCBP2O75592 4640 aa9.31□□□□□ -0.92
GNE-201ENST00000377902 KRTAP21-3Q3LHN1 58 aa9.3□□□□□ -0.92
GNE-201ENST00000377902 KRTAP3-3Q9BYR6 98 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms