RNA–Protein interactions for RNA: ENST00000377823.1

CUBN-201, Transcript of cubilin, humanhuman

TSL 3 BASIC

Gene CUBN, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-201ENST00000377823 Q96NJ1 140 aa1.67□□□□□ -2.14
CUBN-201ENST00000377823 LINC00472Q9H8W2 130 aa1.67□□□□□ -2.14
CUBN-201ENST00000377823 VPS13CQ709C8 3753 aa1.67□□□□□ -2.14
CUBN-201ENST00000377823 KNTC1P50748 2209 aa1.67□□□□□ -2.14
CUBN-201ENST00000377823 GOLGA4Q13439 2230 aaKnown RBP1.67□□□□□ -2.14
CUBN-201ENST00000377823 HMCN1Q96RW7 5635 aa1.67□□□□□ -2.14
CUBN-201ENST00000377823 DNAJC13O75165 2243 aa1.66□□□□□ -2.14
CUBN-201ENST00000377823 F5P12259 2224 aa1.66□□□□□ -2.14
CUBN-201ENST00000377823 LY6G6CO95867 125 aa1.66□□□□□ -2.14
CUBN-201ENST00000377823 C10orf99Q6UWK7 81 aa1.66□□□□□ -2.14
CUBN-201ENST00000377823 SMIM11BQ8TCY0 68 aa1.66□□□□□ -2.14
CUBN-201ENST00000377823 COL4A2P08572 1712 aa1.66□□□□□ -2.14
CUBN-201ENST00000377823 ANGP03950 147 aaKnown RBP1.65□□□□□ -2.15
CUBN-201ENST00000377823 LINC00158P58513 81 aa1.65□□□□□ -2.15
CUBN-201ENST00000377823 TP53AIP1Q9HCN2 124 aa1.65□□□□□ -2.15
CUBN-201ENST00000377823 HERC2O95714 4834 aa1.65□□□□□ -2.15
CUBN-201ENST00000377823 LINC01590Q5TEZ4 76 aa1.64□□□□□ -2.15
CUBN-201ENST00000377823 SSBP3-AS1Q7Z2R9 100 aa1.64□□□□□ -2.15
CUBN-201ENST00000377823 Q8IZM0 81 aa1.64□□□□□ -2.15
CUBN-201ENST00000377823 PLAC4Q8WY50 150 aa1.64□□□□□ -2.15
CUBN-201ENST00000377823 CCL19Q99731 98 aa1.64□□□□□ -2.15
CUBN-201ENST00000377823 ESPL1Q14674 2120 aa1.64□□□□□ -2.15
CUBN-201ENST00000377823 SPINK13Q1W4C9 94 aa1.63□□□□□ -2.15
CUBN-201ENST00000377823 COX6B2Q6YFQ2 88 aa1.63□□□□□ -2.15
CUBN-201ENST00000377823 Q6ZRX8 168 aa1.63□□□□□ -2.15
CUBN-201ENST00000377823 RPS27LQ71UM5 84 aaKnown RBP1.63□□□□□ -2.15
CUBN-201ENST00000377823 SONP18583 2426 aaKnown RBP1.63□□□□□ -2.15
CUBN-201ENST00000377823 ZANQ9Y493 2812 aa1.63□□□□□ -2.15
CUBN-201ENST00000377823 RYR2Q92736 4967 aa1.62□□□□□ -2.15
CUBN-201ENST00000377823 SVEP1Q4LDE5 3571 aa1.62□□□□□ -2.15
CUBN-201ENST00000377823 TNCP24821 2201 aa1.62□□□□□ -2.15
CUBN-201ENST00000377823 MAP1AP78559 2803 aaPredicted RBP1.62□□□□□ -2.15
CUBN-201ENST00000377823 TPRXLQ17RH7 258 aa1.62□□□□□ -2.15
CUBN-201ENST00000377823 KRTAP5-7Q6L8G8 165 aa1.62□□□□□ -2.15
CUBN-201ENST00000377823 SPACA4Q8TDM5 124 aa1.62□□□□□ -2.15
CUBN-201ENST00000377823 PRKDCP78527 4128 aaKnown RBP1.62□□□□□ -2.15
CUBN-201ENST00000377823 CEP192Q8TEP8 1941 aa1.62□□□□□ -2.15
CUBN-201ENST00000377823 DOCK10Q96BY6 2186 aa1.61□□□□□ -2.15
CUBN-201ENST00000377823 LYNX1G3V0Z9 82 aa1.61□□□□□ -2.15
CUBN-201ENST00000377823 USMG5Q96IX5 58 aa1.61□□□□□ -2.15
CUBN-201ENST00000377823 CRIPTQ9P021 101 aa1.61□□□□□ -2.15
CUBN-201ENST00000377823 TENM3Q9P273 2699 aa1.6□□□□□ -2.15
CUBN-201ENST00000377823 CRIP1P50238 77 aa1.6□□□□□ -2.15
CUBN-201ENST00000377823 ABCA4P78363 2273 aa1.6□□□□□ -2.15
CUBN-201ENST00000377823 RP1P56715 2156 aa1.59□□□□□ -2.15
CUBN-201ENST00000377823 A0A096LNT2 108 aa1.59□□□□□ -2.15
CUBN-201ENST00000377823 CCL22O00626 93 aa1.59□□□□□ -2.15
CUBN-201ENST00000377823 KRTAP12-1P59990 96 aa1.59□□□□□ -2.15
CUBN-201ENST00000377823 LINC00575Q6W349 94 aa1.59□□□□□ -2.15
CUBN-201ENST00000377823 CDKN2A-AS1Q9UH64 79 aa1.59□□□□□ -2.15
CUBN-201ENST00000377823 FREM1Q5H8C1 2179 aa1.59□□□□□ -2.16
CUBN-201ENST00000377823 TRRAPQ9Y4A5 3859 aa1.59□□□□□ -2.16
CUBN-201ENST00000377823 UNC13CQ8NB66 2214 aa1.58□□□□□ -2.16
CUBN-201ENST00000377823 PKDREJQ9NTG1 2253 aa1.58□□□□□ -2.16
CUBN-201ENST00000377823 GVQW2A0A096LPI5 108 aaPredicted RBP1.58□□□□□ -2.16
CUBN-201ENST00000377823 POLR2KP53803 58 aaKnown RBP1.58□□□□□ -2.16
CUBN-201ENST00000377823 TTTY10Q9BZA0 68 aa1.58□□□□□ -2.16
CUBN-201ENST00000377823 K7EQZ3 153 aa1.57□□□□□ -2.16
CUBN-201ENST00000377823 MINOS1Q5TGZ0 78 aa1.57□□□□□ -2.16
CUBN-201ENST00000377823 UBE2DNLQ8IWF7 75 aa1.57□□□□□ -2.16
CUBN-201ENST00000377823 TENM2Q9NT68 2774 aa1.57□□□□□ -2.16
CUBN-201ENST00000377823 KIAA1109Q2LD37 5005 aa1.57□□□□□ -2.16
CUBN-201ENST00000377823 G3V318 75 aa1.56□□□□□ -2.16
CUBN-201ENST00000377823 PRCDQ00LT1 54 aa1.56□□□□□ -2.16
CUBN-201ENST00000377823 PCOTHQ58A44 107 aa1.56□□□□□ -2.16
CUBN-201ENST00000377823 ALPK2Q86TB3 2170 aa1.56□□□□□ -2.16
CUBN-201ENST00000377823 PIGYQ3MUY2 71 aa1.55□□□□□ -2.16
CUBN-201ENST00000377823 SMR3AQ99954 134 aa1.55□□□□□ -2.16
CUBN-201ENST00000377823 C6orf48Q9UBA6 75 aa1.55□□□□□ -2.16
CUBN-201ENST00000377823 COL7A1Q02388 2944 aa1.55□□□□□ -2.16
CUBN-201ENST00000377823 HERC1Q15751 4861 aa1.54□□□□□ -2.16
CUBN-201ENST00000377823 Q6ZRN7 208 aaPredicted RBP1.54□□□□□ -2.16
CUBN-201ENST00000377823 KNL1Q8NG31 2342 aa1.54□□□□□ -2.16
CUBN-201ENST00000377823 IGLV5-48A0A075B6I7 105 aa1.53□□□□□ -2.16
CUBN-201ENST00000377823 CD52P31358 61 aa1.53□□□□□ -2.16
CUBN-201ENST00000377823 DEFB131AP59861 70 aa1.53□□□□□ -2.16
CUBN-201ENST00000377823 UNQ6190/PRO20217Q6UXQ8 127 aa1.53□□□□□ -2.16
CUBN-201ENST00000377823 MRPL34Q9BQ48 92 aaKnown RBP1.53□□□□□ -2.16
CUBN-201ENST00000377823 SACSQ9NZJ4 4579 aa1.52□□□□□ -2.17
CUBN-201ENST00000377823 RPL37P61927 97 aaKnown RBP1.52□□□□□ -2.17
CUBN-201ENST00000377823 DNAH1Q9P2D7 4330 aa1.52□□□□□ -2.17
CUBN-201ENST00000377823 ANK3Q12955 4377 aaKnown RBP1.51□□□□□ -2.17
CUBN-201ENST00000377823 H3BSH0 61 aa1.51□□□□□ -2.17
CUBN-201ENST00000377823 RPL39P62891 51 aaKnown RBP1.51□□□□□ -2.17
CUBN-201ENST00000377823 KRTAP13-4Q3LI77 160 aa1.51□□□□□ -2.17
CUBN-201ENST00000377823 CNTRLQ7Z7A1 2325 aa1.5□□□□□ -2.17
CUBN-201ENST00000377823 DYNC2H1Q8NCM8 4307 aaKnown RBP1.5□□□□□ -2.17
CUBN-201ENST00000377823 RPL39LQ96EH5 51 aaKnown RBP1.5□□□□□ -2.17
CUBN-201ENST00000377823 ABCA13Q86UQ4 5058 aa1.5□□□□□ -2.17
CUBN-201ENST00000377823 AKAP6Q13023 2319 aa1.5□□□□□ -2.17
CUBN-201ENST00000377823 H3BUA1 57 aa1.49□□□□□ -2.17
CUBN-201ENST00000377823 PRB3Q04118 309 aaPredicted RBP1.49□□□□□ -2.17
CUBN-201ENST00000377823 CACNA1CQ13936 2221 aa1.49□□□□□ -2.17
CUBN-201ENST00000377823 MUC2Q02817 5179 aa1.49□□□□□ -2.17
CUBN-201ENST00000377823 SORL1Q92673 2214 aa1.48□□□□□ -2.17
CUBN-201ENST00000377823 M0QY20 66 aa1.48□□□□□ -2.17
CUBN-201ENST00000377823 WFDC10BQ8IUB3 73 aa1.48□□□□□ -2.17
CUBN-201ENST00000377823 ROS1P08922 2347 aa1.48□□□□□ -2.17
CUBN-201ENST00000377823 RPS27P42677 84 aaKnown RBP1.47□□□□□ -2.17
CUBN-201ENST00000377823 DEFB109BQ30KR1 87 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms