RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 BATFQ16520 125 aa6.07□□□□□ -1.44
SMARCE1-203ENST00000377808 C20orf166-AS1Q96NR2 134 aa6.07□□□□□ -1.44
SMARCE1-203ENST00000377808 TSTD3H0UI37 97 aa6.05□□□□□ -1.44
SMARCE1-203ENST00000377808 M0R2T5 61 aa6.05□□□□□ -1.44
SMARCE1-203ENST00000377808 LINC00313P59037 77 aa6.05□□□□□ -1.44
SMARCE1-203ENST00000377808 IGHV6-1A0A0B4J1U7 121 aa6.04□□□□□ -1.44
SMARCE1-203ENST00000377808 A8MUU9 505 aa6.04□□□□□ -1.44
SMARCE1-203ENST00000377808 C9JAW5 83 aa6.04□□□□□ -1.44
SMARCE1-203ENST00000377808 LINC00472Q9H8W2 130 aa6.03□□□□□ -1.44
SMARCE1-203ENST00000377808 LYRM7Q5U5X0 104 aa6.02□□□□□ -1.45
SMARCE1-203ENST00000377808 JMJD7-PLA2G4BH0Y9G9 81 aa6□□□□□ -1.45
SMARCE1-203ENST00000377808 NOTCH2NLQ7Z3S9 236 aa6□□□□□ -1.45
SMARCE1-203ENST00000377808 TRBV20-1A0A075B6N2 111 aa5.99□□□□□ -1.45
SMARCE1-203ENST00000377808 KRTAP16-1A8MUX0 517 aa5.99□□□□□ -1.45
SMARCE1-203ENST00000377808 C21orf62-AS1Q17RA5 79 aa5.99□□□□□ -1.45
SMARCE1-203ENST00000377808 FLGP20930 4061 aaPredicted RBP5.98□□□□□ -1.45
SMARCE1-203ENST00000377808 A0A1B0GVX0 72 aa5.98□□□□□ -1.45
SMARCE1-203ENST00000377808 LOC105371267A0A1B0GV96 52 aa5.97□□□□□ -1.45
SMARCE1-203ENST00000377808 C8orf87E5RJ46 101 aa5.97□□□□□ -1.45
SMARCE1-203ENST00000377808 J3KT08 172 aa5.97□□□□□ -1.45
SMARCE1-203ENST00000377808 Q6ZQT0 140 aa5.97□□□□□ -1.45
SMARCE1-203ENST00000377808 C14orf132Q9NPU4 83 aa5.97□□□□□ -1.45
SMARCE1-203ENST00000377808 KRTAP10-6P60371 365 aaPredicted RBP5.96□□□□□ -1.46
SMARCE1-203ENST00000377808 LOC110117498A0A087WWA1 95 aa5.95□□□□□ -1.46
SMARCE1-203ENST00000377808 NDUFB1O75438 58 aa5.95□□□□□ -1.46
SMARCE1-203ENST00000377808 PDE6GP18545 87 aa5.94□□□□□ -1.46
SMARCE1-203ENST00000377808 KRTAP4-9Q9BYQ8 210 aa5.94□□□□□ -1.46
SMARCE1-203ENST00000377808 FAM236DA0A1B0GTK5 79 aa5.93□□□□□ -1.46
SMARCE1-203ENST00000377808 C9orf118A6NHY6 69 aa5.93□□□□□ -1.46
SMARCE1-203ENST00000377808 FAM236CP0DP71 79 aa5.93□□□□□ -1.46
SMARCE1-203ENST00000377808 MTURNQ8N3F0 131 aa5.93□□□□□ -1.46
SMARCE1-203ENST00000377808 A0A1W2PPM0 123 aa5.91□□□□□ -1.46
SMARCE1-203ENST00000377808 TAX1BP3O14907 124 aa5.91□□□□□ -1.46
SMARCE1-203ENST00000377808 A0A1B0GW54 56 aa5.9□□□□□ -1.47
SMARCE1-203ENST00000377808 A8MWP4 228 aa5.89□□□□□ -1.47
SMARCE1-203ENST00000377808 NREPQ16612 68 aa5.89□□□□□ -1.47
SMARCE1-203ENST00000377808 H3BT86 120 aa5.88□□□□□ -1.47
SMARCE1-203ENST00000377808 KRTAP4-2Q9BYR5 136 aa5.88□□□□□ -1.47
SMARCE1-203ENST00000377808 C8orf17Q9NRJ1 99 aa5.88□□□□□ -1.47
SMARCE1-203ENST00000377808 RBM12B-AS1Q9P1G2 102 aa5.88□□□□□ -1.47
SMARCE1-203ENST00000377808 IGKV3D-7A0A0C4DH55 119 aa5.87□□□□□ -1.47
SMARCE1-203ENST00000377808 ZCCHC13Q8WW36 166 aaKnown RBP5.87□□□□□ -1.47
SMARCE1-203ENST00000377808 SPCS1Q9Y6A9 102 aa5.85□□□□□ -1.47
SMARCE1-203ENST00000377808 HRES1P13985 223 aa5.84□□□□□ -1.47
SMARCE1-203ENST00000377808 Q6ZVQ6 151 aa5.83□□□□□ -1.48
SMARCE1-203ENST00000377808 PRR15Q8IV56 129 aa5.83□□□□□ -1.48
SMARCE1-203ENST00000377808 FSIP2Q5CZC0 6907 aa5.83□□□□□ -1.48
SMARCE1-203ENST00000377808 Q8N9P0 234 aaPredicted RBP5.82□□□□□ -1.48
SMARCE1-203ENST00000377808 SPINK7P58062 85 aa5.81□□□□□ -1.48
SMARCE1-203ENST00000377808 COL5A1-AS1Q5SY13 56 aa5.8□□□□□ -1.48
SMARCE1-203ENST00000377808 MMP24-AS1A0A0U1RRL7 71 aa5.79□□□□□ -1.48
SMARCE1-203ENST00000377808 K7EQZ3 153 aa5.79□□□□□ -1.48
SMARCE1-203ENST00000377808 BPY2O14599 106 aa5.79□□□□□ -1.48
SMARCE1-203ENST00000377808 NDUFS5O43920 106 aa5.79□□□□□ -1.48
SMARCE1-203ENST00000377808 CRCT1Q9UGL9 99 aa5.79□□□□□ -1.48
SMARCE1-203ENST00000377808 MPLKIPQ8TAP9 179 aa5.78□□□□□ -1.48
SMARCE1-203ENST00000377808 MRPL34Q9BQ48 92 aaKnown RBP5.78□□□□□ -1.48
SMARCE1-203ENST00000377808 hDV103S1A0JD37 113 aa5.77□□□□□ -1.49
SMARCE1-203ENST00000377808 TMEM254Q8TBM7 123 aa5.77□□□□□ -1.49
SMARCE1-203ENST00000377808 WFDC13Q8IUB5 93 aa5.75□□□□□ -1.49
SMARCE1-203ENST00000377808 K7EP34 96 aa5.74□□□□□ -1.49
SMARCE1-203ENST00000377808 Q8N9L7 120 aa5.74□□□□□ -1.49
SMARCE1-203ENST00000377808 PCP4L1A6NKN8 68 aa5.73□□□□□ -1.49
SMARCE1-203ENST00000377808 KRTAP9-8Q9BYQ0 159 aa5.72□□□□□ -1.49
SMARCE1-203ENST00000377808 H3BS24 57 aa5.71□□□□□ -1.5
SMARCE1-203ENST00000377808 UBL5Q9BZL1 73 aa5.71□□□□□ -1.5
SMARCE1-203ENST00000377808 PRO0461Q9UI25 63 aa5.71□□□□□ -1.5
SMARCE1-203ENST00000377808 CASC2Q6XLA1 102 aa5.7□□□□□ -1.5
SMARCE1-203ENST00000377808 GTF2H5Q6ZYL4 71 aa5.69□□□□□ -1.5
SMARCE1-203ENST00000377808 LINC00846Q9NV44 126 aa5.69□□□□□ -1.5
SMARCE1-203ENST00000377808 IGKV2D-30A0A075B6S6 120 aa5.68□□□□□ -1.5
SMARCE1-203ENST00000377808 HCG22E2RYF7 251 aa5.68□□□□□ -1.5
SMARCE1-203ENST00000377808 IGKV2-30P06310 120 aa5.68□□□□□ -1.5
SMARCE1-203ENST00000377808 MT2AP02795 61 aa5.67□□□□□ -1.5
SMARCE1-203ENST00000377808 KRTAP4-11Q9BYQ6 195 aa5.67□□□□□ -1.5
SMARCE1-203ENST00000377808 KRTAP10-10P60014 251 aa5.65□□□□□ -1.51
SMARCE1-203ENST00000377808 C7orf65Q6ZTY9 151 aa5.65□□□□□ -1.51
SMARCE1-203ENST00000377808 Q5W150 140 aa5.64□□□□□ -1.51
SMARCE1-203ENST00000377808 MT1FP04733 61 aa5.63□□□□□ -1.51
SMARCE1-203ENST00000377808 F8W1H4 67 aa5.62□□□□□ -1.51
SMARCE1-203ENST00000377808 CXCL6P80162 114 aa5.61□□□□□ -1.51
SMARCE1-203ENST00000377808 ETDBQ3ZM63 59 aa5.61□□□□□ -1.51
SMARCE1-203ENST00000377808 USH2AO75445 5202 aa5.59□□□□□ -1.51
SMARCE1-203ENST00000377808 H1FX-AS1Q4G0G2 97 aa5.59□□□□□ -1.51
SMARCE1-203ENST00000377808 SSPOA2VEC9 5147 aa5.56□□□□□ -1.52
SMARCE1-203ENST00000377808 C4orf26Q17RF5 130 aa5.55□□□□□ -1.52
SMARCE1-203ENST00000377808 KRTAP9-3Q9BYQ3 159 aa5.54□□□□□ -1.52
SMARCE1-203ENST00000377808 TP53AIP1Q9HCN2 124 aa5.5□□□□□ -1.53
SMARCE1-203ENST00000377808 KRTAP5-3Q6L8H2 238 aa5.49□□□□□ -1.53
SMARCE1-203ENST00000377808 ACYP1P07311 99 aa5.47□□□□□ -1.53
SMARCE1-203ENST00000377808 HIST1H4AP62805 103 aaKnown RBP5.46□□□□□ -1.54
SMARCE1-203ENST00000377808 C5orf47Q569G3 176 aa5.46□□□□□ -1.54
SMARCE1-203ENST00000377808 C1orf64Q8NEQ6 169 aa5.46□□□□□ -1.54
SMARCE1-203ENST00000377808 LCE4AQ5TA78 99 aa5.45□□□□□ -1.54
SMARCE1-203ENST00000377808 S4R3F8 94 aa5.44□□□□□ -1.54
SMARCE1-203ENST00000377808 FAM240AA0A1B0GVK7 77 aa5.43□□□□□ -1.54
SMARCE1-203ENST00000377808 ATP5EP2Q5VTU8 51 aa5.43□□□□□ -1.54
SMARCE1-203ENST00000377808 TRAV22A0A0B4J277 110 aa5.41□□□□□ -1.54
SMARCE1-203ENST00000377808 KRTAP3-1Q9BYR8 98 aa5.41□□□□□ -1.54
SMARCE1-203ENST00000377808 FAM236AA0A1B0GUQ0 79 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms