RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 ADM2Q7Z4H4 148 aa5.41□□□□□ -1.54
CRNKL1-201ENST00000377327 KRTAP1-5Q9BYS1 174 aa5.41□□□□□ -1.54
CRNKL1-201ENST00000377327 NBPF19A0A087WUL8 3843 aa5.41□□□□□ -1.54
CRNKL1-201ENST00000377327 FBN2P35556 2912 aa5.4□□□□□ -1.54
CRNKL1-201ENST00000377327 A0A087X002 238 aa5.39□□□□□ -1.55
CRNKL1-201ENST00000377327 NOTCH2NLQ7Z3S9 236 aa5.39□□□□□ -1.55
CRNKL1-201ENST00000377327 NF1P21359 2839 aa5.39□□□□□ -1.55
CRNKL1-201ENST00000377327 LINC00304Q8N9R0 145 aa5.39□□□□□ -1.55
CRNKL1-201ENST00000377327 LINC00483Q53H64 154 aa5.38□□□□□ -1.55
CRNKL1-201ENST00000377327 ITPR2Q14571 2701 aa5.38□□□□□ -1.55
CRNKL1-201ENST00000377327 A0A0D9SG42 100 aa5.37□□□□□ -1.55
CRNKL1-201ENST00000377327 C9orf92A6NGG3 77 aa5.37□□□□□ -1.55
CRNKL1-201ENST00000377327 ZNF469Q96JG9 3925 aaPredicted RBP5.37□□□□□ -1.55
CRNKL1-201ENST00000377327 PLAC8Q9NZF1 115 aa5.37□□□□□ -1.55
CRNKL1-201ENST00000377327 TENM4Q6N022 2769 aa5.35□□□□□ -1.55
CRNKL1-201ENST00000377327 KRTAP11-1Q8IUC1 163 aa5.35□□□□□ -1.55
CRNKL1-201ENST00000377327 HIVEP1P15822 2718 aa5.35□□□□□ -1.55
CRNKL1-201ENST00000377327 NSD1Q96L73 2696 aaPredicted RBP5.34□□□□□ -1.55
CRNKL1-201ENST00000377327 DMBT1Q9UGM3 2413 aaPredicted RBP5.34□□□□□ -1.55
CRNKL1-201ENST00000377327 NIPBLQ6KC79 2804 aaeCLIP5.34□□□□□ -1.552e-6■■□□□ 12.2
CRNKL1-201ENST00000377327 STAB2Q8WWQ8 2551 aa5.32□□□□□ -1.56
CRNKL1-201ENST00000377327 PANO1I0J062 215 aa5.32□□□□□ -1.56
CRNKL1-201ENST00000377327 MXRA5Q9NR99 2828 aa5.31□□□□□ -1.56
CRNKL1-201ENST00000377327 AKAP9Q99996 3911 aa5.31□□□□□ -1.56
CRNKL1-201ENST00000377327 CUBNO60494 3623 aa5.3□□□□□ -1.56
CRNKL1-201ENST00000377327 FLG2Q5D862 2391 aaPredicted RBP5.28□□□□□ -1.56
CRNKL1-201ENST00000377327 KRTAP25-1Q3LHN0 102 aa5.27□□□□□ -1.57
CRNKL1-201ENST00000377327 H1FX-AS1Q4G0G2 97 aa5.26□□□□□ -1.57
CRNKL1-201ENST00000377327 KRTAP13-1Q8IUC0 172 aa5.26□□□□□ -1.57
CRNKL1-201ENST00000377327 ROMO1P60602 79 aa5.25□□□□□ -1.57
CRNKL1-201ENST00000377327 RPL37P61927 97 aaKnown RBP5.23□□□□□ -1.57
CRNKL1-201ENST00000377327 PDZD2O15018 2839 aa5.2□□□□□ -1.58
CRNKL1-201ENST00000377327 ANK3Q12955 4377 aaKnown RBP5.2□□□□□ -1.58
CRNKL1-201ENST00000377327 SMR3BP02814 79 aaPredicted RBP5.19□□□□□ -1.58
CRNKL1-201ENST00000377327 LUZP6Q538Z0 58 aa5.17□□□□□ -1.58
CRNKL1-201ENST00000377327 Q6ZRN7 208 aaPredicted RBP5.13□□□□□ -1.59
CRNKL1-201ENST00000377327 COX6B2Q6YFQ2 88 aa5.11□□□□□ -1.59
CRNKL1-201ENST00000377327 A8MUU9 505 aa5.1□□□□□ -1.59
CRNKL1-201ENST00000377327 KRTAP16-1A8MUX0 517 aa5.09□□□□□ -1.59
CRNKL1-201ENST00000377327 S4R3F8 94 aa5.09□□□□□ -1.59
CRNKL1-201ENST00000377327 Q6ZSA8 131 aa5.08□□□□□ -1.6
CRNKL1-201ENST00000377327 OTOGQ6ZRI0 2925 aa5.07□□□□□ -1.6
CRNKL1-201ENST00000377327 NDUFAF8A1L188 74 aa5.07□□□□□ -1.6
CRNKL1-201ENST00000377327 KRTAP10-2P60368 255 aa5.07□□□□□ -1.6
CRNKL1-201ENST00000377327 KRTAP13-2Q52LG2 175 aa5.07□□□□□ -1.6
CRNKL1-201ENST00000377327 TENM3Q9P273 2699 aa5.06□□□□□ -1.6
CRNKL1-201ENST00000377327 KRTAP10-1P60331 282 aa5.06□□□□□ -1.6
CRNKL1-201ENST00000377327 J3QL48 77 aa5.05□□□□□ -1.6
CRNKL1-201ENST00000377327 A0A0A0MQY5 61 aa5.04□□□□□ -1.6
CRNKL1-201ENST00000377327 KRTAP21-3Q3LHN1 58 aa5.04□□□□□ -1.6
CRNKL1-201ENST00000377327 H0YAA0 97 aa5.02□□□□□ -1.61
CRNKL1-201ENST00000377327 KRTAP13-3Q3SY46 172 aa5.01□□□□□ -1.61
CRNKL1-201ENST00000377327 TGP01266 2768 aa4.98□□□□□ -1.61
CRNKL1-201ENST00000377327 RPS29P62273 56 aaKnown RBP4.98□□□□□ -1.61
CRNKL1-201ENST00000377327 CAMK2N1Q7Z7J9 78 aa4.97□□□□□ -1.61
CRNKL1-201ENST00000377327 VWFP04275 2813 aa4.97□□□□□ -1.61
CRNKL1-201ENST00000377327 R4GN34 69 aa4.96□□□□□ -1.61
CRNKL1-201ENST00000377327 CMYA5Q8N3K9 4069 aa4.95□□□□□ -1.62
CRNKL1-201ENST00000377327 C20orf166-AS1Q96NR2 134 aa4.94□□□□□ -1.62
CRNKL1-201ENST00000377327 TENM1Q9UKZ4 2725 aa4.93□□□□□ -1.62
CRNKL1-201ENST00000377327 TRRAPQ9Y4A5 3859 aa4.92□□□□□ -1.62
CRNKL1-201ENST00000377327 ANK2Q01484 3957 aa4.91□□□□□ -1.62
CRNKL1-201ENST00000377327 M0QZ58 72 aa4.9□□□□□ -1.62
CRNKL1-201ENST00000377327 PKD1L1Q8TDX9 2849 aa4.89□□□□□ -1.63
CRNKL1-201ENST00000377327 C10orf95Q9H7T3 257 aa4.89□□□□□ -1.63
CRNKL1-201ENST00000377327 DNAH3Q8TD57 4116 aa4.87□□□□□ -1.63
CRNKL1-201ENST00000377327 KRTAP1-4P0C5Y4 121 aa4.86□□□□□ -1.63
CRNKL1-201ENST00000377327 SRRM2Q9UQ35 2752 aaKnown RBP4.86□□□□□ -1.63
CRNKL1-201ENST00000377327 FBN1P35555 2871 aaKnown RBP4.82□□□□□ -1.64
CRNKL1-201ENST00000377327 P0C880 135 aa4.77□□□□□ -1.65
CRNKL1-201ENST00000377327 TENM2Q9NT68 2774 aa4.74□□□□□ -1.65
CRNKL1-201ENST00000377327 PLAC4Q8WY50 150 aa4.74□□□□□ -1.65
CRNKL1-201ENST00000377327 Q5VSD8 79 aa4.73□□□□□ -1.65
CRNKL1-201ENST00000377327 SEC61BP60468 96 aaKnown RBP4.7□□□□□ -1.66
CRNKL1-201ENST00000377327 TPRXLQ17RH7 258 aa4.69□□□□□ -1.66
CRNKL1-201ENST00000377327 FBN3Q75N90 2809 aa4.68□□□□□ -1.66
CRNKL1-201ENST00000377327 DNAH1Q9P2D7 4330 aa4.68□□□□□ -1.66
CRNKL1-201ENST00000377327 HUWE1Q7Z6Z7 4374 aaKnown RBP4.68□□□□□ -1.66
CRNKL1-201ENST00000377327 DNHD1Q96M86 4753 aa4.68□□□□□ -1.66
CRNKL1-201ENST00000377327 KRTAP3-1Q9BYR8 98 aa4.66□□□□□ -1.66
CRNKL1-201ENST00000377327 LYSTQ99698 3801 aa4.66□□□□□ -1.66
CRNKL1-201ENST00000377327 PP632Q6XCG6 107 aa4.64□□□□□ -1.67
CRNKL1-201ENST00000377327 COL7A1Q02388 2944 aa4.62□□□□□ -1.67
CRNKL1-201ENST00000377327 DNAH9Q9NYC9 4486 aa4.62□□□□□ -1.67
CRNKL1-201ENST00000377327 DYNC2H1Q8NCM8 4307 aaKnown RBP4.61□□□□□ -1.67
CRNKL1-201ENST00000377327 XP32Q5T750 250 aa4.61□□□□□ -1.67
CRNKL1-201ENST00000377327 KRTAP12-2P59991 146 aa4.6□□□□□ -1.67
CRNKL1-201ENST00000377327 CSMD3Q7Z407 3707 aa4.6□□□□□ -1.67
CRNKL1-201ENST00000377327 KRTAP10-8P60410 259 aa4.6□□□□□ -1.67
CRNKL1-201ENST00000377327 DNAH7Q8WXX0 4024 aa4.59□□□□□ -1.67
CRNKL1-201ENST00000377327 MEGF8Q7Z7M0 2845 aa4.59□□□□□ -1.67
CRNKL1-201ENST00000377327 TNP1P09430 55 aa4.57□□□□□ -1.68
CRNKL1-201ENST00000377327 PRKDCP78527 4128 aaKnown RBP4.56□□□□□ -1.68
CRNKL1-201ENST00000377327 KRTAP12-1P59990 96 aa4.55□□□□□ -1.68
CRNKL1-201ENST00000377327 KRTAP10-6P60371 365 aaPredicted RBP4.55□□□□□ -1.68
CRNKL1-201ENST00000377327 KRTAP13-4Q3LI77 160 aa4.55□□□□□ -1.68
CRNKL1-201ENST00000377327 DNAH10Q8IVF4 4471 aa4.54□□□□□ -1.68
CRNKL1-201ENST00000377327 M0R2T5 61 aa4.53□□□□□ -1.68
CRNKL1-201ENST00000377327 KRTAP15-1Q3LI76 137 aa4.52□□□□□ -1.69
CRNKL1-201ENST00000377327 PLECQ15149 4684 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 171.1 ms