RNA–Protein interactions for RNA: ENST00000377142.4

NKX2-2-201, Transcript of NK2 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-2, Length 2,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2-201ENST00000377142 ATP5EP56381 51 aaPredicted RBP10.16□□□□□ -0.78
NKX2-2-201ENST00000377142 RPS28P62857 69 aaKnown RBP10.16□□□□□ -0.78
NKX2-2-201ENST00000377142 ZCCHC13Q8WW36 166 aaKnown RBP10.16□□□□□ -0.78
NKX2-2-201ENST00000377142 RYR2Q92736 4967 aa10.16□□□□□ -0.78
NKX2-2-201ENST00000377142 DYNC1H1Q14204 4646 aaKnown RBP10.15□□□□□ -0.78
NKX2-2-201ENST00000377142 LIMD2Q9BT23 127 aa10.13□□□□□ -0.79
NKX2-2-201ENST00000377142 SMR3BP02814 79 aaPredicted RBP10.13□□□□□ -0.79
NKX2-2-201ENST00000377142 TYMSOSQ8TAI1 123 aa10.13□□□□□ -0.79
NKX2-2-201ENST00000377142 H0Y9P7 68 aa10.11□□□□□ -0.79
NKX2-2-201ENST00000377142 H3BPC8 53 aa10.11□□□□□ -0.79
NKX2-2-201ENST00000377142 TP53AIP1Q9HCN2 124 aa10.11□□□□□ -0.79
NKX2-2-201ENST00000377142 MRPL34Q9BQ48 92 aaKnown RBP10.1□□□□□ -0.79
NKX2-2-201ENST00000377142 TRAV22A0A0B4J277 110 aa10.08□□□□□ -0.8
NKX2-2-201ENST00000377142 C8orf87E5RJ46 101 aa10.08□□□□□ -0.8
NKX2-2-201ENST00000377142 C1orf195Q5TG92 126 aa10.08□□□□□ -0.8
NKX2-2-201ENST00000377142 NOTCH2NLQ7Z3S9 236 aa10.07□□□□□ -0.8
NKX2-2-201ENST00000377142 LINC00208Q96KT6 92 aa10.07□□□□□ -0.8
NKX2-2-201ENST00000377142 SPINK1P00995 79 aa10.06□□□□□ -0.8
NKX2-2-201ENST00000377142 APOBP04114 4563 aaKnown RBP10.05□□□□□ -0.8
NKX2-2-201ENST00000377142 KRTAP10-4P60372 401 aaPredicted RBP10.05□□□□□ -0.8
NKX2-2-201ENST00000377142 SERP1Q9Y6X1 66 aa10.05□□□□□ -0.8
NKX2-2-201ENST00000377142 KMT2CQ8NEZ4 4911 aaKnown RBP10.05□□□□□ -0.8
NKX2-2-201ENST00000377142 NDUFS5O43920 106 aa10.04□□□□□ -0.8
NKX2-2-201ENST00000377142 PRR26Q8N8Z3 221 aa10.03□□□□□ -0.8
NKX2-2-201ENST00000377142 OXTP01178 125 aa10□□□□□ -0.81
NKX2-2-201ENST00000377142 RPS29P62273 56 aaKnown RBP10□□□□□ -0.81
NKX2-2-201ENST00000377142 LINC00304Q8N9R0 145 aa10□□□□□ -0.81
NKX2-2-201ENST00000377142 C1orf64Q8NEQ6 169 aa10□□□□□ -0.81
NKX2-2-201ENST00000377142 SPAG11AQ6PDA7 123 aa10□□□□□ -0.81
NKX2-2-201ENST00000377142 LINC00313P59037 77 aa9.98□□□□□ -0.81
NKX2-2-201ENST00000377142 A0A0A0MQY5 61 aa9.92□□□□□ -0.82
NKX2-2-201ENST00000377142 SPANXA2-OT1Q8N9U9 137 aa9.91□□□□□ -0.82
NKX2-2-201ENST00000377142 CYP4F30PQ9H0H9 118 aa9.91□□□□□ -0.82
NKX2-2-201ENST00000377142 FAT1Q14517 4588 aa9.91□□□□□ -0.82
NKX2-2-201ENST00000377142 FAM229AH3BQW9 127 aa9.9□□□□□ -0.82
NKX2-2-201ENST00000377142 Q8N9P0 234 aaPredicted RBP9.89□□□□□ -0.83
NKX2-2-201ENST00000377142 V9GYY9 64 aa9.89□□□□□ -0.83
NKX2-2-201ENST00000377142 KRTAP16-1A8MUX0 517 aa9.87□□□□□ -0.83
NKX2-2-201ENST00000377142 KRTAP13-3Q3SY46 172 aa9.86□□□□□ -0.83
NKX2-2-201ENST00000377142 LOC101927531A0A1B0GV80 90 aa9.84□□□□□ -0.83
NKX2-2-201ENST00000377142 Q5W150 140 aa9.84□□□□□ -0.83
NKX2-2-201ENST00000377142 PRR4Q16378 134 aa9.84□□□□□ -0.83
NKX2-2-201ENST00000377142 SMIM26A0A096LP01 95 aa9.83□□□□□ -0.84
NKX2-2-201ENST00000377142 H3BS24 57 aa9.83□□□□□ -0.84
NKX2-2-201ENST00000377142 PKHD1L1Q86WI1 4243 aa9.82□□□□□ -0.84
NKX2-2-201ENST00000377142 PCOTHQ58A44 107 aa9.81□□□□□ -0.84
NKX2-2-201ENST00000377142 Q5VSD8 79 aa9.81□□□□□ -0.84
NKX2-2-201ENST00000377142 IGLV7-46A0A075B6I9 117 aa9.79□□□□□ -0.84
NKX2-2-201ENST00000377142 RYR3Q15413 4870 aa9.78□□□□□ -0.84
NKX2-2-201ENST00000377142 FP248Q71RG6 208 aaPredicted RBP9.73□□□□□ -0.85
NKX2-2-201ENST00000377142 HSPG2P98160 4391 aa9.73□□□□□ -0.85
NKX2-2-201ENST00000377142 RETNLBQ9BQ08 111 aa9.7□□□□□ -0.86
NKX2-2-201ENST00000377142 IGKV2-30P06310 120 aa9.68□□□□□ -0.86
NKX2-2-201ENST00000377142 KRTAP10-8P60410 259 aa9.67□□□□□ -0.86
NKX2-2-201ENST00000377142 C4orf26Q17RF5 130 aa9.65□□□□□ -0.86
NKX2-2-201ENST00000377142 Q8N1X5 172 aa9.65□□□□□ -0.87
NKX2-2-201ENST00000377142 RYR1P21817 5038 aa9.64□□□□□ -0.87
NKX2-2-201ENST00000377142 COA5Q86WW8 74 aa9.62□□□□□ -0.87
NKX2-2-201ENST00000377142 C9orf92A6NGG3 77 aa9.61□□□□□ -0.87
NKX2-2-201ENST00000377142 FLG2Q5D862 2391 aaPredicted RBP9.61□□□□□ -0.87
NKX2-2-201ENST00000377142 MPLKIPQ8TAP9 179 aa9.6□□□□□ -0.87
NKX2-2-201ENST00000377142 HRES1P13985 223 aa9.6□□□□□ -0.87
NKX2-2-201ENST00000377142 C20orf166-AS1Q96NR2 134 aa9.6□□□□□ -0.87
NKX2-2-201ENST00000377142 A8MUU9 505 aa9.59□□□□□ -0.87
NKX2-2-201ENST00000377142 KRTAP17-1Q9BYP8 105 aa9.58□□□□□ -0.88
NKX2-2-201ENST00000377142 IGKV2D-30A0A075B6S6 120 aa9.57□□□□□ -0.88
NKX2-2-201ENST00000377142 TNXBP22105 4242 aa9.57□□□□□ -0.88
NKX2-2-201ENST00000377142 Q1T7F1 81 aa9.57□□□□□ -0.88
NKX2-2-201ENST00000377142 LRP1Q07954 4544 aaKnown RBP9.54□□□□□ -0.88
NKX2-2-201ENST00000377142 C7orf65Q6ZTY9 151 aa9.53□□□□□ -0.88
NKX2-2-201ENST00000377142 DMAC1Q96GE9 116 aa9.53□□□□□ -0.88
NKX2-2-201ENST00000377142 ACYP2P14621 99 aa9.51□□□□□ -0.89
NKX2-2-201ENST00000377142 FAT3Q8TDW7 4589 aa9.49□□□□□ -0.89
NKX2-2-201ENST00000377142 KIAA1109Q2LD37 5005 aa9.48□□□□□ -0.89
NKX2-2-201ENST00000377142 Q75L30 129 aa9.47□□□□□ -0.89
NKX2-2-201ENST00000377142 MT1HL1P0DM35 61 aa9.46□□□□□ -0.9
NKX2-2-201ENST00000377142 EPPK1P58107 5090 aaKnown RBP9.42□□□□□ -0.9
NKX2-2-201ENST00000377142 CHKB-CPT1BH3BT56 60 aa9.38□□□□□ -0.91
NKX2-2-201ENST00000377142 PSPHP1O15172 72 aa9.37□□□□□ -0.91
NKX2-2-201ENST00000377142 A8MUN3 132 aa9.34□□□□□ -0.91
NKX2-2-201ENST00000377142 DMBT1Q9UGM3 2413 aaPredicted RBP9.34□□□□□ -0.91
NKX2-2-201ENST00000377142 PRO0628Q9UI54 55 aa9.33□□□□□ -0.92
NKX2-2-201ENST00000377142 LINC01558Q9Y6Z2 57 aa9.33□□□□□ -0.92
NKX2-2-201ENST00000377142 SPINK7P58062 85 aa9.32□□□□□ -0.92
NKX2-2-201ENST00000377142 MYCBP2O75592 4640 aa9.32□□□□□ -0.92
NKX2-2-201ENST00000377142 PRR15LQ9BU68 103 aa9.32□□□□□ -0.92
NKX2-2-201ENST00000377142 RPL37P61927 97 aaKnown RBP9.31□□□□□ -0.92
NKX2-2-201ENST00000377142 ATP11AUNQ6ZP68 121 aa9.3□□□□□ -0.92
NKX2-2-201ENST00000377142 XP32Q5T750 250 aa9.3□□□□□ -0.92
NKX2-2-201ENST00000377142 Q5VV11 94 aa9.3□□□□□ -0.92
NKX2-2-201ENST00000377142 KRTAP4-5Q9BYR2 181 aa9.25□□□□□ -0.93
NKX2-2-201ENST00000377142 BRK1Q8WUW1 75 aa9.24□□□□□ -0.93
NKX2-2-201ENST00000377142 TPRXLQ17RH7 258 aa9.19□□□□□ -0.94
NKX2-2-201ENST00000377142 COX6B2Q6YFQ2 88 aa9.15□□□□□ -0.94
NKX2-2-201ENST00000377142 KRTAP3-1Q9BYR8 98 aa9.15□□□□□ -0.94
NKX2-2-201ENST00000377142 SPTSSBQ8NFR3 76 aa9.12□□□□□ -0.95
NKX2-2-201ENST00000377142 A0A1B0GU69 56 aa9.09□□□□□ -0.95
NKX2-2-201ENST00000377142 A6NED7 52 aa9.09□□□□□ -0.95
NKX2-2-201ENST00000377142 SEC61BP60468 96 aaKnown RBP9.04□□□□□ -0.96
NKX2-2-201ENST00000377142 CDC42SE1Q9NRR8 79 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms