RNA–Protein interactions for RNA: ENST00000377115.4

FOXA2-201, Transcript of forkhead box A2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXA2, Length 2,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-201ENST00000377115 SPACA4Q8TDM5 124 aa13.74□□□□□ -0.21
FOXA2-201ENST00000377115 MGAM2Q2M2H8 2515 aa13.74□□□□□ -0.21
FOXA2-201ENST00000377115 DNAH8Q96JB1 4490 aa13.72□□□□□ -0.21
FOXA2-201ENST00000377115 Q6ZRN7 208 aaPredicted RBP13.71□□□□□ -0.22
FOXA2-201ENST00000377115 NBDYA0A0U1RRE5 68 aa13.7□□□□□ -0.22
FOXA2-201ENST00000377115 RBM12B-AS1Q9P1G2 102 aa13.7□□□□□ -0.22
FOXA2-201ENST00000377115 Q5W150 140 aa13.66□□□□□ -0.22
FOXA2-201ENST00000377115 PRR26Q8N8Z3 221 aa13.66□□□□□ -0.22
FOXA2-201ENST00000377115 ZNF706Q9Y5V0 76 aaPredicted RBP13.65□□□□□ -0.22
FOXA2-201ENST00000377115 PSORS1C2Q9UIG4 136 aa13.64□□□□□ -0.23
FOXA2-201ENST00000377115 SPINK6Q6UWN8 80 aa13.63□□□□□ -0.23
FOXA2-201ENST00000377115 MDFIQ99750 246 aa13.61□□□□□ -0.23
FOXA2-201ENST00000377115 HECTD4Q9Y4D8 3996 aa13.6□□□□□ -0.23
FOXA2-201ENST00000377115 IGLV5-52A0A0A0MRZ9 124 aa13.59□□□□□ -0.23
FOXA2-201ENST00000377115 KRTAP13-3Q3SY46 172 aa13.59□□□□□ -0.23
FOXA2-201ENST00000377115 C7orf65Q6ZTY9 151 aa13.57□□□□□ -0.24
FOXA2-201ENST00000377115 ALMS1Q8TCU4 4167 aa13.55□□□□□ -0.24
FOXA2-201ENST00000377115 ZNF861PO60384 105 aa13.54□□□□□ -0.24
FOXA2-201ENST00000377115 A0A087WTM6 91 aa13.5□□□□□ -0.25
FOXA2-201ENST00000377115 DNAH17Q9UFH2 4485 aa13.48□□□□□ -0.25
FOXA2-201ENST00000377115 RTL8CO15255 209 aa13.48□□□□□ -0.25
FOXA2-201ENST00000377115 ACYP2P14621 99 aa13.48□□□□□ -0.25
FOXA2-201ENST00000377115 VPS13DQ5THJ4 4388 aa13.47□□□□□ -0.25
FOXA2-201ENST00000377115 CIRBP-AS1Q8TBR5 109 aa13.47□□□□□ -0.25
FOXA2-201ENST00000377115 STARD9Q9P2P6 4700 aa13.46□□□□□ -0.25
FOXA2-201ENST00000377115 DNAH2Q9P225 4427 aa13.41□□□□□ -0.26
FOXA2-201ENST00000377115 DMAC1Q96GE9 116 aa13.4□□□□□ -0.26
FOXA2-201ENST00000377115 NUPR2A6NF83 97 aa13.39□□□□□ -0.27
FOXA2-201ENST00000377115 RETNLBQ9BQ08 111 aa13.39□□□□□ -0.27
FOXA2-201ENST00000377115 KMT2AQ03164 3969 aa13.38□□□□□ -0.27
FOXA2-201ENST00000377115 C8orf87E5RJ46 101 aa13.34□□□□□ -0.27
FOXA2-201ENST00000377115 IGLV7-43P04211 117 aa13.33□□□□□ -0.28
FOXA2-201ENST00000377115 LINC00313P59037 77 aa13.32□□□□□ -0.28
FOXA2-201ENST00000377115 FBN3Q75N90 2809 aa13.31□□□□□ -0.28
FOXA2-201ENST00000377115 PRKDCP78527 4128 aaKnown RBP13.3□□□□□ -0.28
FOXA2-201ENST00000377115 A0A1B0GU69 56 aa13.29□□□□□ -0.28
FOXA2-201ENST00000377115 PRAC1Q96KF2 57 aa13.29□□□□□ -0.28
FOXA2-201ENST00000377115 FAM229AH3BQW9 127 aa13.27□□□□□ -0.29
FOXA2-201ENST00000377115 IGKV2-30P06310 120 aa13.24□□□□□ -0.29
FOXA2-201ENST00000377115 ADM2Q7Z4H4 148 aa13.24□□□□□ -0.29
FOXA2-201ENST00000377115 SSBP3-AS1Q7Z2R9 100 aa13.22□□□□□ -0.29
FOXA2-201ENST00000377115 MEGF8Q7Z7M0 2845 aa13.21□□□□□ -0.29
FOXA2-201ENST00000377115 DNAH11Q96DT5 4516 aa13.21□□□□□ -0.3
FOXA2-201ENST00000377115 DNAH6Q9C0G6 4158 aa13.19□□□□□ -0.3
FOXA2-201ENST00000377115 SPATA8Q6RVD6 105 aa13.18□□□□□ -0.3
FOXA2-201ENST00000377115 TGP01266 2768 aa13.17□□□□□ -0.3
FOXA2-201ENST00000377115 PLA2G1BP04054 148 aaKnown RBP13.13□□□□□ -0.31
FOXA2-201ENST00000377115 KRTAP16-1A8MUX0 517 aa13.12□□□□□ -0.31
FOXA2-201ENST00000377115 MIR22HGQ0VDD5 57 aa13.11□□□□□ -0.31
FOXA2-201ENST00000377115 KRTAP13-2Q52LG2 175 aa13.1□□□□□ -0.31
FOXA2-201ENST00000377115 IGKV2D-30A0A075B6S6 120 aa13.1□□□□□ -0.31
FOXA2-201ENST00000377115 UQCR11O14957 56 aa13.08□□□□□ -0.32
FOXA2-201ENST00000377115 DNAH5Q8TE73 4624 aa13.07□□□□□ -0.32
FOXA2-201ENST00000377115 C1orf134Q5TEV5 83 aa13.04□□□□□ -0.32
FOXA2-201ENST00000377115 LRP1BQ9NZR2 4599 aa12.96□□□□□ -0.33
FOXA2-201ENST00000377115 KRTAP10-2P60368 255 aa12.94□□□□□ -0.34
FOXA2-201ENST00000377115 LINC01554Q52M75 96 aa12.91□□□□□ -0.34
FOXA2-201ENST00000377115 SPINK1P00995 79 aa12.89□□□□□ -0.35
FOXA2-201ENST00000377115 LY6G6CO95867 125 aa12.85□□□□□ -0.35
FOXA2-201ENST00000377115 KRTAP1-4P0C5Y4 121 aa12.85□□□□□ -0.35
FOXA2-201ENST00000377115 Q8N1X5 172 aa12.84□□□□□ -0.35
FOXA2-201ENST00000377115 VPS13BQ7Z7G8 4022 aa12.81□□□□□ -0.36
FOXA2-201ENST00000377115 CSAG1Q6PB30 78 aa12.81□□□□□ -0.36
FOXA2-201ENST00000377115 KRTAP10-1P60331 282 aa12.77□□□□□ -0.37
FOXA2-201ENST00000377115 PKD1P98161 4303 aa12.75□□□□□ -0.37
FOXA2-201ENST00000377115 C4orf48Q5BLP8 95 aa12.73□□□□□ -0.37
FOXA2-201ENST00000377115 Q6ZSA8 131 aa12.73□□□□□ -0.37
FOXA2-201ENST00000377115 TYMSOSQ8TAI1 123 aa12.69□□□□□ -0.38
FOXA2-201ENST00000377115 FAT2Q9NYQ8 4349 aa12.65□□□□□ -0.38
FOXA2-201ENST00000377115 H0YAA0 97 aa12.63□□□□□ -0.39
FOXA2-201ENST00000377115 HYDINQ4G0P3 5121 aa12.62□□□□□ -0.39
FOXA2-201ENST00000377115 A8MUU9 505 aa12.54□□□□□ -0.4
FOXA2-201ENST00000377115 LINC00304Q8N9R0 145 aa12.49□□□□□ -0.41
FOXA2-201ENST00000377115 KRTAP3-1Q9BYR8 98 aa12.48□□□□□ -0.41
FOXA2-201ENST00000377115 C9orf92A6NGG3 77 aa12.46□□□□□ -0.41
FOXA2-201ENST00000377115 A0A1B0GU33 70 aa12.45□□□□□ -0.42
FOXA2-201ENST00000377115 DNHD1Q96M86 4753 aa12.44□□□□□ -0.42
FOXA2-201ENST00000377115 H1FX-AS1Q4G0G2 97 aa12.39□□□□□ -0.43
FOXA2-201ENST00000377115 PKHD1P08F94 4074 aa12.38□□□□□ -0.43
FOXA2-201ENST00000377115 RPS29P62273 56 aaKnown RBP12.38□□□□□ -0.43
FOXA2-201ENST00000377115 SACSQ9NZJ4 4579 aa12.37□□□□□ -0.43
FOXA2-201ENST00000377115 KRTAP25-1Q3LHN0 102 aa12.37□□□□□ -0.43
FOXA2-201ENST00000377115 C20orf166-AS1Q96NR2 134 aa12.36□□□□□ -0.43
FOXA2-201ENST00000377115 H3BS24 57 aa12.33□□□□□ -0.44
FOXA2-201ENST00000377115 FLG2Q5D862 2391 aaPredicted RBP12.26□□□□□ -0.45
FOXA2-201ENST00000377115 PKHD1L1Q86WI1 4243 aa12.24□□□□□ -0.45
FOXA2-201ENST00000377115 CRIPTQ9P021 101 aa12.21□□□□□ -0.46
FOXA2-201ENST00000377115 SMR3BP02814 79 aaPredicted RBP12.2□□□□□ -0.46
FOXA2-201ENST00000377115 COX6B2Q6YFQ2 88 aa12.19□□□□□ -0.46
FOXA2-201ENST00000377115 FAT1Q14517 4588 aa12.16□□□□□ -0.46
FOXA2-201ENST00000377115 ROMO1P60602 79 aa12.13□□□□□ -0.47
FOXA2-201ENST00000377115 DYNC1H1Q14204 4646 aaKnown RBP12.12□□□□□ -0.47
FOXA2-201ENST00000377115 APOBP04114 4563 aaKnown RBP12.11□□□□□ -0.47
FOXA2-201ENST00000377115 K7ERS5 55 aa12.1□□□□□ -0.47
FOXA2-201ENST00000377115 KRTAP10-4P60372 401 aaPredicted RBP11.96□□□□□ -0.49
FOXA2-201ENST00000377115 KRTAP10-6P60371 365 aaPredicted RBP11.95□□□□□ -0.5
FOXA2-201ENST00000377115 KRTAP13-4Q3LI77 160 aa11.94□□□□□ -0.5
FOXA2-201ENST00000377115 KRTAP3-3Q9BYR6 98 aa11.91□□□□□ -0.5
FOXA2-201ENST00000377115 RPL37P61927 97 aaKnown RBP11.9□□□□□ -0.5
FOXA2-201ENST00000377115 A0A0D9SG42 100 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms