RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 HSBP1L1C9JCN9 74 aa4.74□□□□□ -1.65
C9orf85-202ENST00000377027 DLEU1O43261 78 aa4.73□□□□□ -1.65
C9orf85-202ENST00000377027 S100A2P29034 98 aa4.73□□□□□ -1.65
C9orf85-202ENST00000377027 A0A0B4J2C4 111 aa4.72□□□□□ -1.65
C9orf85-202ENST00000377027 LCE1EQ5T753 118 aa4.72□□□□□ -1.65
C9orf85-202ENST00000377027 C14orf144Q96I85 54 aa4.72□□□□□ -1.65
C9orf85-202ENST00000377027 H3BMG7 143 aa4.71□□□□□ -1.66
C9orf85-202ENST00000377027 TRBV20-1A0A075B6N2 111 aa4.7□□□□□ -1.66
C9orf85-202ENST00000377027 H0YGX0 51 aa4.7□□□□□ -1.66
C9orf85-202ENST00000377027 SIGMAR1Q99720 223 aa4.7□□□□□ -1.66
C9orf85-202ENST00000377027 HIGD1BQ9P298 99 aa4.7□□□□□ -1.66
C9orf85-202ENST00000377027 SMIM6P0DI80 62 aa4.69□□□□□ -1.66
C9orf85-202ENST00000377027 KRTAP5-11Q6L8G4 156 aa4.69□□□□□ -1.66
C9orf85-202ENST00000377027 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.69□□□□□ -1.66
C9orf85-202ENST00000377027 RAB37Q96AX2 223 aa4.69□□□□□ -1.66
C9orf85-202ENST00000377027 FXYD2P54710 66 aa4.68□□□□□ -1.66
C9orf85-202ENST00000377027 LINC00313P59037 77 aa4.68□□□□□ -1.66
C9orf85-202ENST00000377027 DEFB116Q30KQ4 102 aa4.68□□□□□ -1.66
C9orf85-202ENST00000377027 LINC00472Q9H8W2 130 aa4.68□□□□□ -1.66
C9orf85-202ENST00000377027 A0A1B0GV72 72 aa4.67□□□□□ -1.66
C9orf85-202ENST00000377027 IGKV4-1P06312 121 aa4.67□□□□□ -1.66
C9orf85-202ENST00000377027 FABP2P12104 132 aa4.67□□□□□ -1.66
C9orf85-202ENST00000377027 SPATA45Q537H7 98 aa4.67□□□□□ -1.66
C9orf85-202ENST00000377027 CEND1Q8N111 149 aa4.67□□□□□ -1.66
C9orf85-202ENST00000377027 A0A1B0GX51 115 aa4.66□□□□□ -1.66
C9orf85-202ENST00000377027 TRBV7-4A0A0J9YYF1 115 aa4.65□□□□□ -1.67
C9orf85-202ENST00000377027 FAM236DA0A1B0GTK5 79 aa4.65□□□□□ -1.67
C9orf85-202ENST00000377027 FAM236CP0DP71 79 aa4.65□□□□□ -1.67
C9orf85-202ENST00000377027 KRTAP10-10P60014 251 aa4.65□□□□□ -1.67
C9orf85-202ENST00000377027 PRO1854Q9UHT4 67 aa4.65□□□□□ -1.67
C9orf85-202ENST00000377027 LCE1FQ5T754 118 aa4.63□□□□□ -1.67
C9orf85-202ENST00000377027 IGHV6-1A0A0B4J1U7 121 aa4.62□□□□□ -1.67
C9orf85-202ENST00000377027 K7ERJ3 54 aa4.62□□□□□ -1.67
C9orf85-202ENST00000377027 ANKRD29Q8N6D5 301 aa4.62□□□□□ -1.67
C9orf85-202ENST00000377027 SNCGO76070 127 aa4.61□□□□□ -1.67
C9orf85-202ENST00000377027 KRTAP19-6Q3LI70 58 aa4.61□□□□□ -1.67
C9orf85-202ENST00000377027 ORMDL1Q9P0S3 153 aa4.61□□□□□ -1.67
C9orf85-202ENST00000377027 RBM12B-AS1Q9P1G2 102 aa4.61□□□□□ -1.67
C9orf85-202ENST00000377027 MACF1Q9UPN3 7388 aaKnown RBP4.61□□□□□ -1.67
C9orf85-202ENST00000377027 PCP4L1A6NKN8 68 aa4.6□□□□□ -1.67
C9orf85-202ENST00000377027 CCKP06307 115 aa4.6□□□□□ -1.67
C9orf85-202ENST00000377027 VAMP8Q9BV40 100 aa4.6□□□□□ -1.67
C9orf85-202ENST00000377027 SYNE2Q8WXH0 6885 aaKnown RBP4.59□□□□□ -1.68
C9orf85-202ENST00000377027 A0A1B0GVX0 72 aa4.58□□□□□ -1.68
C9orf85-202ENST00000377027 TRACP01848 142 aa4.58□□□□□ -1.68
C9orf85-202ENST00000377027 ZCCHC13Q8WW36 166 aaKnown RBP4.57□□□□□ -1.68
C9orf85-202ENST00000377027 PRAC1Q96KF2 57 aa4.57□□□□□ -1.68
C9orf85-202ENST00000377027 TMEM256-PLSCR3K7ERE1 68 aa4.56□□□□□ -1.68
C9orf85-202ENST00000377027 DNAL4O96015 105 aa4.56□□□□□ -1.68
C9orf85-202ENST00000377027 SPINK7P58062 85 aa4.56□□□□□ -1.68
C9orf85-202ENST00000377027 C8orf87E5RJ46 101 aa4.55□□□□□ -1.68
C9orf85-202ENST00000377027 HSD52Q0P140 79 aa4.55□□□□□ -1.68
C9orf85-202ENST00000377027 PSMB2P49721 201 aa4.54□□□□□ -1.68
C9orf85-202ENST00000377027 PYY3Q5JQD4 70 aa4.54□□□□□ -1.68
C9orf85-202ENST00000377027 KRTAP10-12P60413 245 aa4.53□□□□□ -1.68
C9orf85-202ENST00000377027 VPS25Q9BRG1 176 aa4.53□□□□□ -1.68
C9orf85-202ENST00000377027 H3BQ85 93 aa4.52□□□□□ -1.69
C9orf85-202ENST00000377027 KRTAP10-5P60370 271 aa4.51□□□□□ -1.69
C9orf85-202ENST00000377027 Q6ZQT0 140 aa4.51□□□□□ -1.69
C9orf85-202ENST00000377027 WFDC13Q8IUB5 93 aa4.51□□□□□ -1.69
C9orf85-202ENST00000377027 RBM3P98179 157 aaKnown RBP4.5□□□□□ -1.69
C9orf85-202ENST00000377027 IGKV3D-7A0A0C4DH55 119 aa4.49□□□□□ -1.69
C9orf85-202ENST00000377027 NDUFAF8A1L188 74 aa4.49□□□□□ -1.69
C9orf85-202ENST00000377027 A8MWP4 228 aa4.49□□□□□ -1.69
C9orf85-202ENST00000377027 TSTD3H0UI37 97 aa4.49□□□□□ -1.69
C9orf85-202ENST00000377027 MTURNQ8N3F0 131 aa4.49□□□□□ -1.69
C9orf85-202ENST00000377027 C8orf17Q9NRJ1 99 aa4.49□□□□□ -1.69
C9orf85-202ENST00000377027 COX6CP09669 75 aa4.48□□□□□ -1.69
C9orf85-202ENST00000377027 J3KT08 172 aa4.47□□□□□ -1.69
C9orf85-202ENST00000377027 DSCR8Q96T75 97 aa4.47□□□□□ -1.69
C9orf85-202ENST00000377027 MUC12Q9UKN1 5478 aa4.46□□□□□ -1.7
C9orf85-202ENST00000377027 BAALC-AS2P0C853 105 aa4.46□□□□□ -1.7
C9orf85-202ENST00000377027 KRTAP6-3Q3LI67 103 aa4.46□□□□□ -1.7
C9orf85-202ENST00000377027 C9JAW5 83 aa4.45□□□□□ -1.7
C9orf85-202ENST00000377027 MMP24-AS1A0A0U1RRL7 71 aa4.44□□□□□ -1.7
C9orf85-202ENST00000377027 Q6ZVQ6 151 aa4.44□□□□□ -1.7
C9orf85-202ENST00000377027 UQCR10Q9UDW1 63 aa4.44□□□□□ -1.7
C9orf85-202ENST00000377027 SCGB1C2P0DMR2 95 aa4.43□□□□□ -1.7
C9orf85-202ENST00000377027 NAA38Q9BRA0 125 aaKnown RBP4.43□□□□□ -1.7
C9orf85-202ENST00000377027 LOC110117498A0A087WWA1 95 aa4.42□□□□□ -1.7
C9orf85-202ENST00000377027 A0A1B0GV90 55 aa4.42□□□□□ -1.7
C9orf85-202ENST00000377027 NDUFB1O75438 58 aa4.41□□□□□ -1.7
C9orf85-202ENST00000377027 PRR15Q8IV56 129 aa4.41□□□□□ -1.7
C9orf85-202ENST00000377027 LINC00846Q9NV44 126 aa4.41□□□□□ -1.7
C9orf85-202ENST00000377027 M0R143 59 aa4.4□□□□□ -1.71
C9orf85-202ENST00000377027 H1FX-AS1Q4G0G2 97 aa4.4□□□□□ -1.71
C9orf85-202ENST00000377027 C14orf132Q9NPU4 83 aa4.4□□□□□ -1.71
C9orf85-202ENST00000377027 TMEM254Q8TBM7 123 aa4.39□□□□□ -1.71
C9orf85-202ENST00000377027 MRPL34Q9BQ48 92 aaKnown RBP4.39□□□□□ -1.71
C9orf85-202ENST00000377027 K7EQZ3 153 aa4.38□□□□□ -1.71
C9orf85-202ENST00000377027 LYRM7Q5U5X0 104 aa4.38□□□□□ -1.71
C9orf85-202ENST00000377027 Q5W150 140 aa4.38□□□□□ -1.71
C9orf85-202ENST00000377027 A0A1B0GW54 56 aa4.37□□□□□ -1.71
C9orf85-202ENST00000377027 JMJD7-PLA2G4BH0Y9G9 81 aa4.37□□□□□ -1.71
C9orf85-202ENST00000377027 MT1BP07438 61 aa4.36□□□□□ -1.71
C9orf85-202ENST00000377027 ATXN8Q156A1 80 aa4.36□□□□□ -1.71
C9orf85-202ENST00000377027 SCGB1A1P11684 91 aa4.35□□□□□ -1.71
C9orf85-202ENST00000377027 hDV103S1A0JD37 113 aa4.34□□□□□ -1.71
C9orf85-202ENST00000377027 NREPQ16612 68 aa4.33□□□□□ -1.72
C9orf85-202ENST00000377027 COL5A1-AS1Q5SY13 56 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms