RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 C21orf62-AS1Q17RA5 79 aa10.57□□□□□ -0.72
VSX1-201ENST00000376707 RBM12B-AS1Q9P1G2 102 aa10.57□□□□□ -0.72
VSX1-201ENST00000376707 C9JAW5 83 aa10.56□□□□□ -0.72
VSX1-201ENST00000376707 A0A1B0GVX0 72 aa10.55□□□□□ -0.72
VSX1-201ENST00000376707 C8orf87E5RJ46 101 aa10.55□□□□□ -0.72
VSX1-201ENST00000376707 M0R143 59 aa10.54□□□□□ -0.72
VSX1-201ENST00000376707 HRES1P13985 223 aa10.53□□□□□ -0.72
VSX1-201ENST00000376707 J3KT08 172 aa10.52□□□□□ -0.73
VSX1-201ENST00000376707 Q6ZQT0 140 aa10.52□□□□□ -0.73
VSX1-201ENST00000376707 ATXN8Q156A1 80 aa10.51□□□□□ -0.73
VSX1-201ENST00000376707 MPLKIPQ8TAP9 179 aa10.51□□□□□ -0.73
VSX1-201ENST00000376707 USH2AO75445 5202 aa10.49□□□□□ -0.73
VSX1-201ENST00000376707 MT2AP02795 61 aa10.48□□□□□ -0.73
VSX1-201ENST00000376707 A0A1B0GW54 56 aa10.47□□□□□ -0.73
VSX1-201ENST00000376707 JMJD7-PLA2G4BH0Y9G9 81 aa10.47□□□□□ -0.73
VSX1-201ENST00000376707 NAA38Q9BRA0 125 aaKnown RBP10.47□□□□□ -0.73
VSX1-201ENST00000376707 LOC110117498A0A087WWA1 95 aa10.46□□□□□ -0.73
VSX1-201ENST00000376707 SMIM6P0DI80 62 aa10.45□□□□□ -0.74
VSX1-201ENST00000376707 SSPOA2VEC9 5147 aa10.43□□□□□ -0.74
VSX1-201ENST00000376707 PDE6GP18545 87 aa10.42□□□□□ -0.74
VSX1-201ENST00000376707 NDUFB1O75438 58 aa10.41□□□□□ -0.74
VSX1-201ENST00000376707 ZCCHC13Q8WW36 166 aaKnown RBP10.41□□□□□ -0.74
VSX1-201ENST00000376707 MT1FP04733 61 aa10.4□□□□□ -0.74
VSX1-201ENST00000376707 MTURNQ8N3F0 131 aa10.4□□□□□ -0.74
VSX1-201ENST00000376707 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.39□□□□□ -0.75
VSX1-201ENST00000376707 Q8N9P0 234 aaPredicted RBP10.39□□□□□ -0.75
VSX1-201ENST00000376707 A8MWP4 228 aa10.38□□□□□ -0.75
VSX1-201ENST00000376707 KRTAP10-10P60014 251 aa10.38□□□□□ -0.75
VSX1-201ENST00000376707 LYRM7Q5U5X0 104 aa10.38□□□□□ -0.75
VSX1-201ENST00000376707 C14orf132Q9NPU4 83 aa10.36□□□□□ -0.75
VSX1-201ENST00000376707 C8orf17Q9NRJ1 99 aa10.35□□□□□ -0.75
VSX1-201ENST00000376707 KRTAP9-7A8MTY7 169 aa10.34□□□□□ -0.75
VSX1-201ENST00000376707 SPINK7P58062 85 aa10.34□□□□□ -0.75
VSX1-201ENST00000376707 IGKV3D-7A0A0C4DH55 119 aa10.33□□□□□ -0.76
VSX1-201ENST00000376707 TSTD3H0UI37 97 aa10.32□□□□□ -0.76
VSX1-201ENST00000376707 KRTAP9-3Q9BYQ3 159 aa10.31□□□□□ -0.76
VSX1-201ENST00000376707 PRR15Q8IV56 129 aa10.28□□□□□ -0.76
VSX1-201ENST00000376707 BATFQ16520 125 aa10.27□□□□□ -0.77
VSX1-201ENST00000376707 NREPQ16612 68 aa10.26□□□□□ -0.77
VSX1-201ENST00000376707 Q6ZVQ6 151 aa10.26□□□□□ -0.77
VSX1-201ENST00000376707 FCGBPQ9Y6R7 5405 aaPredicted RBP10.25□□□□□ -0.77
VSX1-201ENST00000376707 KRTAP19-1Q8IUB9 90 aa10.24□□□□□ -0.77
VSX1-201ENST00000376707 C9orf118A6NHY6 69 aa10.23□□□□□ -0.77
VSX1-201ENST00000376707 WFDC13Q8IUB5 93 aa10.23□□□□□ -0.77
VSX1-201ENST00000376707 H3BT86 120 aa10.22□□□□□ -0.77
VSX1-201ENST00000376707 MMP24-AS1A0A0U1RRL7 71 aa10.19□□□□□ -0.78
VSX1-201ENST00000376707 LOC100996750A0A140TA64 210 aa10.19□□□□□ -0.78
VSX1-201ENST00000376707 TAX1BP3O14907 124 aa10.19□□□□□ -0.78
VSX1-201ENST00000376707 TMEM254Q8TBM7 123 aa10.19□□□□□ -0.78
VSX1-201ENST00000376707 KRTAP4-6Q9BYQ5 205 aa10.19□□□□□ -0.78
VSX1-201ENST00000376707 A0A1W2PPM0 123 aa10.18□□□□□ -0.78
VSX1-201ENST00000376707 MRPL34Q9BQ48 92 aaKnown RBP10.17□□□□□ -0.78
VSX1-201ENST00000376707 LOC105371267A0A1B0GV96 52 aa10.15□□□□□ -0.78
VSX1-201ENST00000376707 K7EQZ3 153 aa10.13□□□□□ -0.79
VSX1-201ENST00000376707 hDV103S1A0JD37 113 aa10.11□□□□□ -0.79
VSX1-201ENST00000376707 BPY2O14599 106 aa10.07□□□□□ -0.8
VSX1-201ENST00000376707 LINC00846Q9NV44 126 aa10.07□□□□□ -0.8
VSX1-201ENST00000376707 NDUFS5O43920 106 aa10.04□□□□□ -0.8
VSX1-201ENST00000376707 SPCS1Q9Y6A9 102 aa10.02□□□□□ -0.81
VSX1-201ENST00000376707 KRTAP19-6Q3LI70 58 aa10□□□□□ -0.81
VSX1-201ENST00000376707 H1FX-AS1Q4G0G2 97 aa10□□□□□ -0.81
VSX1-201ENST00000376707 Q5W150 140 aa9.98□□□□□ -0.81
VSX1-201ENST00000376707 MACF1Q9UPN3 7388 aaKnown RBP9.97□□□□□ -0.81
VSX1-201ENST00000376707 Q8N9L7 120 aa9.96□□□□□ -0.82
VSX1-201ENST00000376707 IGKV2D-30A0A075B6S6 120 aa9.94□□□□□ -0.82
VSX1-201ENST00000376707 IGKV2-30P06310 120 aa9.94□□□□□ -0.82
VSX1-201ENST00000376707 CASC2Q6XLA1 102 aa9.94□□□□□ -0.82
VSX1-201ENST00000376707 C7orf65Q6ZTY9 151 aa9.93□□□□□ -0.82
VSX1-201ENST00000376707 SYNE2Q8WXH0 6885 aaKnown RBP9.92□□□□□ -0.82
VSX1-201ENST00000376707 PRO0461Q9UI25 63 aa9.91□□□□□ -0.82
VSX1-201ENST00000376707 COL5A1-AS1Q5SY13 56 aa9.9□□□□□ -0.82
VSX1-201ENST00000376707 HCG22E2RYF7 251 aa9.89□□□□□ -0.83
VSX1-201ENST00000376707 CXCL6P80162 114 aa9.87□□□□□ -0.83
VSX1-201ENST00000376707 UBL5Q9BZL1 73 aa9.86□□□□□ -0.83
VSX1-201ENST00000376707 K7EP34 96 aa9.85□□□□□ -0.83
VSX1-201ENST00000376707 C4orf26Q17RF5 130 aa9.78□□□□□ -0.84
VSX1-201ENST00000376707 GTF2H5Q6ZYL4 71 aa9.7□□□□□ -0.86
VSX1-201ENST00000376707 F8W1H4 67 aa9.68□□□□□ -0.86
VSX1-201ENST00000376707 C5orf47Q569G3 176 aa9.67□□□□□ -0.86
VSX1-201ENST00000376707 KRTAP3-1Q9BYR8 98 aa9.67□□□□□ -0.86
VSX1-201ENST00000376707 TP53AIP1Q9HCN2 124 aa9.66□□□□□ -0.86
VSX1-201ENST00000376707 KRTAP6-3Q3LI67 103 aa9.65□□□□□ -0.86
VSX1-201ENST00000376707 FAM236AA0A1B0GUQ0 79 aa9.64□□□□□ -0.87
VSX1-201ENST00000376707 FAM236BA0A1B0GV22 79 aa9.64□□□□□ -0.87
VSX1-201ENST00000376707 ETDBQ3ZM63 59 aa9.63□□□□□ -0.87
VSX1-201ENST00000376707 C1orf64Q8NEQ6 169 aa9.6□□□□□ -0.87
VSX1-201ENST00000376707 S4R3F8 94 aa9.6□□□□□ -0.87
VSX1-201ENST00000376707 CSAG1Q6PB30 78 aa9.56□□□□□ -0.88
VSX1-201ENST00000376707 LCA10Q71F78 164 aa9.53□□□□□ -0.88
VSX1-201ENST00000376707 PCP4L1A6NKN8 68 aa9.52□□□□□ -0.89
VSX1-201ENST00000376707 A6NN06 94 aa9.5□□□□□ -0.89
VSX1-201ENST00000376707 Q5VV11 94 aa9.5□□□□□ -0.89
VSX1-201ENST00000376707 MT1BP07438 61 aa9.48□□□□□ -0.89
VSX1-201ENST00000376707 CYP4F30PQ9H0H9 118 aa9.48□□□□□ -0.89
VSX1-201ENST00000376707 SPRR2GQ9BYE4 73 aa9.46□□□□□ -0.9
VSX1-201ENST00000376707 ACYP1P07311 99 aa9.45□□□□□ -0.9
VSX1-201ENST00000376707 TRAV22A0A0B4J277 110 aa9.43□□□□□ -0.9
VSX1-201ENST00000376707 KRTAP19-8Q3LI54 63 aa9.43□□□□□ -0.9
VSX1-201ENST00000376707 FAM240AA0A1B0GVK7 77 aa9.41□□□□□ -0.9
VSX1-201ENST00000376707 LOC101927531A0A1B0GV80 90 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms