RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 WFDC13Q8IUB5 93 aa-0.21□□□□□ -2.44
VPS13A-206ENST00000376646 C14orf144Q96I85 54 aa-0.21□□□□□ -2.44
VPS13A-206ENST00000376646 CLTCQ00610 1675 aaKnown RBP-0.21□□□□□ -2.44
VPS13A-206ENST00000376646 C4AP0C0L4 1744 aa-0.22□□□□□ -2.44
VPS13A-206ENST00000376646 C4BP0C0L5 1744 aa-0.22□□□□□ -2.44
VPS13A-206ENST00000376646 ANKRD36BQ8N2N9 1353 aa-0.22□□□□□ -2.44
VPS13A-206ENST00000376646 PSMG4Q5JS54 123 aa-0.22□□□□□ -2.44
VPS13A-206ENST00000376646 MRPL34Q9BQ48 92 aaKnown RBP-0.22□□□□□ -2.44
VPS13A-206ENST00000376646 KIF20BQ96Q89 1820 aa-0.22□□□□□ -2.45
VPS13A-206ENST00000376646 F8WEM9 126 aa-0.22□□□□□ -2.45
VPS13A-206ENST00000376646 H3BQF6 201 aa-0.22□□□□□ -2.45
VPS13A-206ENST00000376646 NDUFC1O43677 76 aa-0.22□□□□□ -2.45
VPS13A-206ENST00000376646 PMCHL1Q16048 86 aa-0.22□□□□□ -2.45
VPS13A-206ENST00000376646 ALKAL2Q6UX46 152 aa-0.22□□□□□ -2.45
VPS13A-206ENST00000376646 PMCHL2Q9BQD1 86 aa-0.22□□□□□ -2.45
VPS13A-206ENST00000376646 C20orf78Q9BR46 151 aa-0.22□□□□□ -2.45
VPS13A-206ENST00000376646 BCORQ6W2J9 1755 aa-0.23□□□□□ -2.45
VPS13A-206ENST00000376646 TRBV25-1A0A075B6N4 114 aa-0.23□□□□□ -2.45
VPS13A-206ENST00000376646 H0Y9P7 68 aa-0.23□□□□□ -2.45
VPS13A-206ENST00000376646 H3BNG1 76 aa-0.23□□□□□ -2.45
VPS13A-206ENST00000376646 ARMS2P0C7Q2 107 aa-0.23□□□□□ -2.45
VPS13A-206ENST00000376646 TCEAL7Q9BRU2 100 aa-0.23□□□□□ -2.45
VPS13A-206ENST00000376646 SAMD9LQ8IVG5 1584 aa-0.23□□□□□ -2.45
VPS13A-206ENST00000376646 CRYBG1Q9Y4K1 1723 aa-0.23□□□□□ -2.45
VPS13A-206ENST00000376646 SCRIBQ14160 1630 aa-0.23□□□□□ -2.45
VPS13A-206ENST00000376646 H0YAA0 97 aa-0.24□□□□□ -2.45
VPS13A-206ENST00000376646 MT1FP04733 61 aa-0.24□□□□□ -2.45
VPS13A-206ENST00000376646 GNGT1P63211 74 aa-0.24□□□□□ -2.45
VPS13A-206ENST00000376646 AP4S1Q9Y587 144 aa-0.24□□□□□ -2.45
VPS13A-206ENST00000376646 DDX60LQ5H9U9 1706 aaKnown RBP-0.24□□□□□ -2.45
VPS13A-206ENST00000376646 ALS2Q96Q42 1657 aa-0.24□□□□□ -2.45
VPS13A-206ENST00000376646 ABCC6O95255 1503 aa-0.24□□□□□ -2.45
VPS13A-206ENST00000376646 TRAV30A0A087WSZ9 112 aa-0.24□□□□□ -2.45
VPS13A-206ENST00000376646 TRBV7-7A0A0K0K1E9 115 aa-0.24□□□□□ -2.45
VPS13A-206ENST00000376646 UQCRHP07919 91 aa-0.24□□□□□ -2.45
VPS13A-206ENST00000376646 FAUP35544 74 aaKnown RBP-0.24□□□□□ -2.45
VPS13A-206ENST00000376646 DEFB124Q8NES8 71 aa-0.24□□□□□ -2.45
VPS13A-206ENST00000376646 TRGV9Q99603 122 aa-0.24□□□□□ -2.45
VPS13A-206ENST00000376646 SNHG12Q9BXW3 62 aa-0.24□□□□□ -2.45
VPS13A-206ENST00000376646 DEPDC5O75140 1603 aa-0.24□□□□□ -2.45
VPS13A-206ENST00000376646 MROH1Q8NDA8 1641 aa-0.24□□□□□ -2.45
VPS13A-206ENST00000376646 CCDC141Q6ZP82 1450 aa-0.24□□□□□ -2.45
VPS13A-206ENST00000376646 EDC4Q6P2E9 1401 aaKnown RBP-0.25□□□□□ -2.45
VPS13A-206ENST00000376646 IQCF6A8MYZ5 107 aa-0.25□□□□□ -2.45
VPS13A-206ENST00000376646 I3L3M4 83 aa-0.25□□□□□ -2.45
VPS13A-206ENST00000376646 LEPROTL1O95214 131 aa-0.25□□□□□ -2.45
VPS13A-206ENST00000376646 TRPM2O94759 1503 aa-0.25□□□□□ -2.45
VPS13A-206ENST00000376646 AGLP35573 1532 aa-0.25□□□□□ -2.45
VPS13A-206ENST00000376646 KIAA1551Q9HCM1 1747 aa-0.25□□□□□ -2.45
VPS13A-206ENST00000376646 SPTY2D1-AS1A0A0U1RR47 76 aa-0.25□□□□□ -2.45
VPS13A-206ENST00000376646 D6R8Y8 96 aa-0.25□□□□□ -2.45
VPS13A-206ENST00000376646 MT1AP04731 61 aa-0.25□□□□□ -2.45
VPS13A-206ENST00000376646 KRTAP19-2Q3LHN2 52 aa-0.25□□□□□ -2.45
VPS13A-206ENST00000376646 TDRG1Q3Y452 100 aa-0.25□□□□□ -2.45
VPS13A-206ENST00000376646 DEFB121Q5J5C9 76 aa-0.25□□□□□ -2.45
VPS13A-206ENST00000376646 COL5A1-AS1Q5SY13 56 aa-0.25□□□□□ -2.45
VPS13A-206ENST00000376646 MUSTN1Q8IVN3 82 aa-0.25□□□□□ -2.45
VPS13A-206ENST00000376646 S4R3F8 94 aa-0.25□□□□□ -2.45
VPS13A-206ENST00000376646 NRAPQ86VF7 1730 aa-0.25□□□□□ -2.45
VPS13A-206ENST00000376646 AKAP12Q02952 1782 aa-0.25□□□□□ -2.45
VPS13A-206ENST00000376646 ANKRD36CQ5JPF3 1778 aa-0.25□□□□□ -2.45
VPS13A-206ENST00000376646 CNTLNQ9NXG0 1405 aa-0.26□□□□□ -2.45
VPS13A-206ENST00000376646 LMO7Q8WWI1 1683 aa-0.26□□□□□ -2.45
VPS13A-206ENST00000376646 TRAV21A0A0B4J279 112 aa-0.26□□□□□ -2.45
VPS13A-206ENST00000376646 ATOX1O00244 68 aa-0.26□□□□□ -2.45
VPS13A-206ENST00000376646 MT2AP02795 61 aa-0.26□□□□□ -2.45
VPS13A-206ENST00000376646 DEFB130BP0DP73 79 aa-0.26□□□□□ -2.45
VPS13A-206ENST00000376646 DEFB130AP0DP74 79 aa-0.26□□□□□ -2.45
VPS13A-206ENST00000376646 COX7BP24311 80 aa-0.26□□□□□ -2.45
VPS13A-206ENST00000376646 KRTAP19-5Q3LI72 72 aa-0.26□□□□□ -2.45
VPS13A-206ENST00000376646 ETDBQ3ZM63 59 aa-0.26□□□□□ -2.45
VPS13A-206ENST00000376646 SERP2Q8N6R1 65 aa-0.26□□□□□ -2.45
VPS13A-206ENST00000376646 CDKN2A-AS1Q9UH64 79 aa-0.26□□□□□ -2.45
VPS13A-206ENST00000376646 DDX60Q8IY21 1712 aaKnown RBP-0.26□□□□□ -2.45
VPS13A-206ENST00000376646 IFI6P09912 130 aa-0.26□□□□□ -2.45
VPS13A-206ENST00000376646 RBP2P50120 134 aa-0.26□□□□□ -2.45
VPS13A-206ENST00000376646 NCBP2-AS2Q69YL0 99 aa-0.26□□□□□ -2.45
VPS13A-206ENST00000376646 ACYP1P07311 99 aa-0.27□□□□□ -2.45
VPS13A-206ENST00000376646 DEFB106AQ8N104 65 aa-0.27□□□□□ -2.45
VPS13A-206ENST00000376646 WFDC9Q8NEX5 89 aa-0.27□□□□□ -2.45
VPS13A-206ENST00000376646 GAFA1Q96PS6 74 aa-0.27□□□□□ -2.45
VPS13A-206ENST00000376646 UBE2D4Q9Y2X8 147 aa-0.27□□□□□ -2.45
VPS13A-206ENST00000376646 RICTORQ6R327 1708 aa-0.27□□□□□ -2.45
VPS13A-206ENST00000376646 NCOA2Q15596 1464 aa-0.27□□□□□ -2.45
VPS13A-206ENST00000376646 FYCO1Q9BQS8 1478 aa-0.27□□□□□ -2.45
VPS13A-206ENST00000376646 ARFGEF2Q9Y6D5 1785 aa-0.27□□□□□ -2.45
VPS13A-206ENST00000376646 H0YGG7 62 aa-0.27□□□□□ -2.45
VPS13A-206ENST00000376646 LINC00158P58513 81 aa-0.27□□□□□ -2.45
VPS13A-206ENST00000376646 DEFB110Q30KQ9 67 aa-0.27□□□□□ -2.45
VPS13A-206ENST00000376646 CDC42BPGQ6DT37 1551 aa-0.28□□□□□ -2.45
VPS13A-206ENST00000376646 MYO3AQ8NEV4 1616 aa-0.28□□□□□ -2.45
VPS13A-206ENST00000376646 UQCRHLA0A096LP55 91 aa-0.28□□□□□ -2.45
VPS13A-206ENST00000376646 CRIP1P50238 77 aa-0.28□□□□□ -2.45
VPS13A-206ENST00000376646 NMSQ5H8A3 153 aa-0.28□□□□□ -2.45
VPS13A-206ENST00000376646 DPY30Q9C005 99 aa-0.28□□□□□ -2.45
VPS13A-206ENST00000376646 CLIP1P30622 1438 aa-0.28□□□□□ -2.45
VPS13A-206ENST00000376646 ANKRD50Q9ULJ7 1429 aa-0.28□□□□□ -2.45
VPS13A-206ENST00000376646 INO80Q9ULG1 1556 aaPredicted RBP-0.28□□□□□ -2.45
VPS13A-206ENST00000376646 K7EP34 96 aa-0.29□□□□□ -2.46
VPS13A-206ENST00000376646 M0R143 59 aa-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms