RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 TRBV7-7A0A0K0K1E9 115 aa7.17□□□□□ -1.26
CLCN6-205ENST00000376492 A0A1W2PNM2 257 aa7.17□□□□□ -1.26
CLCN6-205ENST00000376492 KRTAP10-6P60371 365 aaPredicted RBP7.17□□□□□ -1.26
CLCN6-205ENST00000376492 A0A0G2JQZ4 141 aa7.16□□□□□ -1.26
CLCN6-205ENST00000376492 PCOTHQ58A44 107 aa7.16□□□□□ -1.26
CLCN6-205ENST00000376492 SS18L2Q9UHA2 77 aa7.15□□□□□ -1.26
CLCN6-205ENST00000376492 UBL5Q9BZL1 73 aa7.14□□□□□ -1.27
CLCN6-205ENST00000376492 A0A1B0GV72 72 aa7.13□□□□□ -1.27
CLCN6-205ENST00000376492 VPS25Q9BRG1 176 aa7.11□□□□□ -1.27
CLCN6-205ENST00000376492 LINC00846Q9NV44 126 aa7.11□□□□□ -1.27
CLCN6-205ENST00000376492 C9orf92A6NGG3 77 aa7.1□□□□□ -1.27
CLCN6-205ENST00000376492 ATP5EP2Q5VTU8 51 aa7.1□□□□□ -1.27
CLCN6-205ENST00000376492 LINC00643Q86TS7 51 aa7.1□□□□□ -1.27
CLCN6-205ENST00000376492 NREPQ16612 68 aa7.09□□□□□ -1.27
CLCN6-205ENST00000376492 C1orf195Q5TG92 126 aa7.09□□□□□ -1.27
CLCN6-205ENST00000376492 A0A087WSZ3 146 aa7.08□□□□□ -1.28
CLCN6-205ENST00000376492 M0R2T5 61 aa7.07□□□□□ -1.28
CLCN6-205ENST00000376492 CXCL6P80162 114 aa7.07□□□□□ -1.28
CLCN6-205ENST00000376492 J3KT08 172 aa7.06□□□□□ -1.28
CLCN6-205ENST00000376492 Q6ZVQ6 151 aa7.06□□□□□ -1.28
CLCN6-205ENST00000376492 FLGP20930 4061 aaPredicted RBP7.05□□□□□ -1.28
CLCN6-205ENST00000376492 IMUPQ9GZP8 106 aa7.04□□□□□ -1.28
CLCN6-205ENST00000376492 LINC00472Q9H8W2 130 aa7.04□□□□□ -1.28
CLCN6-205ENST00000376492 KRTAP9-7A8MTY7 169 aa7.02□□□□□ -1.29
CLCN6-205ENST00000376492 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.01□□□□□ -1.29
CLCN6-205ENST00000376492 SIGMAR1Q99720 223 aa7.01□□□□□ -1.29
CLCN6-205ENST00000376492 BPY2O14599 106 aa7□□□□□ -1.29
CLCN6-205ENST00000376492 COX6B2Q6YFQ2 88 aa6.99□□□□□ -1.29
CLCN6-205ENST00000376492 Q96NJ1 140 aa6.98□□□□□ -1.29
CLCN6-205ENST00000376492 USH2AO75445 5202 aa6.97□□□□□ -1.29
CLCN6-205ENST00000376492 SSPOA2VEC9 5147 aa6.96□□□□□ -1.29
CLCN6-205ENST00000376492 NDUFB1O75438 58 aa6.95□□□□□ -1.3
CLCN6-205ENST00000376492 A8MWP4 228 aa6.94□□□□□ -1.3
CLCN6-205ENST00000376492 RPL37P61927 97 aaKnown RBP6.94□□□□□ -1.3
CLCN6-205ENST00000376492 IGKV4-1P06312 121 aa6.92□□□□□ -1.3
CLCN6-205ENST00000376492 DSCR10P59022 87 aa6.92□□□□□ -1.3
CLCN6-205ENST00000376492 PRR15Q8IV56 129 aa6.91□□□□□ -1.3
CLCN6-205ENST00000376492 MT-ATP8P03928 68 aa6.9□□□□□ -1.3
CLCN6-205ENST00000376492 IGKV3D-7A0A0C4DH55 119 aa6.89□□□□□ -1.31
CLCN6-205ENST00000376492 A0A1B0GVX0 72 aa6.88□□□□□ -1.31
CLCN6-205ENST00000376492 C8orf87E5RJ46 101 aa6.88□□□□□ -1.31
CLCN6-205ENST00000376492 SCGB1A1P11684 91 aa6.86□□□□□ -1.31
CLCN6-205ENST00000376492 K7EQZ3 153 aa6.85□□□□□ -1.31
CLCN6-205ENST00000376492 DEFB116Q30KQ4 102 aa6.85□□□□□ -1.31
CLCN6-205ENST00000376492 HIST1H4AP62805 103 aaKnown RBP6.84□□□□□ -1.31
CLCN6-205ENST00000376492 FCGBPQ9Y6R7 5405 aaPredicted RBP6.83□□□□□ -1.32
CLCN6-205ENST00000376492 Q75L30 129 aa6.83□□□□□ -1.32
CLCN6-205ENST00000376492 HCG22E2RYF7 251 aa6.81□□□□□ -1.32
CLCN6-205ENST00000376492 KRTAP9-8Q9BYQ0 159 aa6.81□□□□□ -1.32
CLCN6-205ENST00000376492 LINC00313P59037 77 aa6.8□□□□□ -1.32
CLCN6-205ENST00000376492 C8orf17Q9NRJ1 99 aa6.8□□□□□ -1.32
CLCN6-205ENST00000376492 IGHV6-1A0A0B4J1U7 121 aa6.79□□□□□ -1.32
CLCN6-205ENST00000376492 MMP24-AS1A0A0U1RRL7 71 aa6.79□□□□□ -1.32
CLCN6-205ENST00000376492 SMIM20Q8N5G0 67 aa6.79□□□□□ -1.32
CLCN6-205ENST00000376492 Q8N9L7 120 aa6.79□□□□□ -1.32
CLCN6-205ENST00000376492 C20orf166-AS1Q96NR2 134 aa6.79□□□□□ -1.32
CLCN6-205ENST00000376492 hDV103S1A0JD37 113 aa6.78□□□□□ -1.32
CLCN6-205ENST00000376492 ATP11AUNQ6ZP68 121 aa6.78□□□□□ -1.32
CLCN6-205ENST00000376492 TMEM254Q8TBM7 123 aa6.78□□□□□ -1.32
CLCN6-205ENST00000376492 A8MUU9 505 aa6.77□□□□□ -1.33
CLCN6-205ENST00000376492 CASC2Q6XLA1 102 aa6.77□□□□□ -1.33
CLCN6-205ENST00000376492 A0A087WVE0 104 aa6.76□□□□□ -1.33
CLCN6-205ENST00000376492 ATOX1O00244 68 aa6.75□□□□□ -1.33
CLCN6-205ENST00000376492 FAM236AA0A1B0GUQ0 79 aa6.74□□□□□ -1.33
CLCN6-205ENST00000376492 FAM236BA0A1B0GV22 79 aa6.74□□□□□ -1.33
CLCN6-205ENST00000376492 Q8N9P0 234 aaPredicted RBP6.74□□□□□ -1.33
CLCN6-205ENST00000376492 MRPL34Q9BQ48 92 aaKnown RBP6.74□□□□□ -1.33
CLCN6-205ENST00000376492 TP53AIP1Q9HCN2 124 aa6.74□□□□□ -1.33
CLCN6-205ENST00000376492 KRTAP16-1A8MUX0 517 aa6.73□□□□□ -1.33
CLCN6-205ENST00000376492 NOTCH2NLQ7Z3S9 236 aa6.73□□□□□ -1.33
CLCN6-205ENST00000376492 KRTAP19-1Q8IUB9 90 aa6.71□□□□□ -1.34
CLCN6-205ENST00000376492 SYNE2Q8WXH0 6885 aaKnown RBP6.7□□□□□ -1.34
CLCN6-205ENST00000376492 MACF1Q9UPN3 7388 aaKnown RBP6.69□□□□□ -1.34
CLCN6-205ENST00000376492 LCE2BO14633 110 aa6.68□□□□□ -1.34
CLCN6-205ENST00000376492 MT2AP02795 61 aa6.68□□□□□ -1.34
CLCN6-205ENST00000376492 WFDC13Q8IUB5 93 aa6.68□□□□□ -1.34
CLCN6-205ENST00000376492 OCR1Q9BZK8 76 aa6.68□□□□□ -1.34
CLCN6-205ENST00000376492 UQCRQO14949 82 aa6.67□□□□□ -1.34
CLCN6-205ENST00000376492 TRAV7A0A075B6U4 112 aa6.66□□□□□ -1.34
CLCN6-205ENST00000376492 MT1FP04733 61 aa6.64□□□□□ -1.35
CLCN6-205ENST00000376492 C5orf47Q569G3 176 aa6.64□□□□□ -1.35
CLCN6-205ENST00000376492 SERP2Q8N6R1 65 aa6.64□□□□□ -1.35
CLCN6-205ENST00000376492 H3BPC8 53 aa6.62□□□□□ -1.35
CLCN6-205ENST00000376492 ANAPC13Q9BS18 74 aa6.6□□□□□ -1.35
CLCN6-205ENST00000376492 KRTAP9-3Q9BYQ3 159 aa6.6□□□□□ -1.35
CLCN6-205ENST00000376492 NDUFS5O43920 106 aa6.59□□□□□ -1.35
CLCN6-205ENST00000376492 COX7CP15954 63 aa6.59□□□□□ -1.35
CLCN6-205ENST00000376492 TRAV22A0A0B4J277 110 aa6.58□□□□□ -1.36
CLCN6-205ENST00000376492 MP68P56378 58 aa6.57□□□□□ -1.36
CLCN6-205ENST00000376492 KRTAP10-10P60014 251 aa6.56□□□□□ -1.36
CLCN6-205ENST00000376492 ZCCHC13Q8WW36 166 aaKnown RBP6.56□□□□□ -1.36
CLCN6-205ENST00000376492 FAM236DA0A1B0GTK5 79 aa6.52□□□□□ -1.37
CLCN6-205ENST00000376492 LOC101927531A0A1B0GV80 90 aa6.52□□□□□ -1.37
CLCN6-205ENST00000376492 FAM236CP0DP71 79 aa6.52□□□□□ -1.37
CLCN6-205ENST00000376492 KLKP1Q107X0 134 aa6.52□□□□□ -1.37
CLCN6-205ENST00000376492 H0Y9P7 68 aa6.51□□□□□ -1.37
CLCN6-205ENST00000376492 MPLKIPQ8TAP9 179 aa6.51□□□□□ -1.37
CLCN6-205ENST00000376492 HRES1P13985 223 aa6.5□□□□□ -1.37
CLCN6-205ENST00000376492 Q5W150 140 aa6.5□□□□□ -1.37
CLCN6-205ENST00000376492 NDUFC1O43677 76 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 326.5 ms