RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 K7EQZ3 153 aa6.43□□□□□ -1.38
PDPN-202ENST00000376057 HSPG2P98160 4391 aa6.43□□□□□ -1.38
PDPN-202ENST00000376057 Q5VSD8 79 aa6.42□□□□□ -1.38
PDPN-202ENST00000376057 NDUFB1O75438 58 aa6.41□□□□□ -1.38
PDPN-202ENST00000376057 Q8N9L7 120 aa6.41□□□□□ -1.38
PDPN-202ENST00000376057 RYR1P21817 5038 aa6.41□□□□□ -1.38
PDPN-202ENST00000376057 Q8N1X5 172 aa6.4□□□□□ -1.38
PDPN-202ENST00000376057 HCG22E2RYF7 251 aa6.4□□□□□ -1.38
PDPN-202ENST00000376057 PRR26Q8N8Z3 221 aa6.4□□□□□ -1.38
PDPN-202ENST00000376057 SMIM26A0A096LP01 95 aa6.4□□□□□ -1.39
PDPN-202ENST00000376057 FP248Q71RG6 208 aaPredicted RBP6.4□□□□□ -1.39
PDPN-202ENST00000376057 DEFB116Q30KQ4 102 aa6.39□□□□□ -1.39
PDPN-202ENST00000376057 LINC00304Q8N9R0 145 aa6.39□□□□□ -1.39
PDPN-202ENST00000376057 KRTAP29-1A8MX34 341 aaPredicted RBP6.39□□□□□ -1.39
PDPN-202ENST00000376057 A0A1B0GVX0 72 aa6.38□□□□□ -1.39
PDPN-202ENST00000376057 TRAV7A0A075B6U4 112 aa6.38□□□□□ -1.39
PDPN-202ENST00000376057 FAT1Q14517 4588 aa6.37□□□□□ -1.39
PDPN-202ENST00000376057 KRTAP10-8P60410 259 aa6.36□□□□□ -1.39
PDPN-202ENST00000376057 PMAIP1Q13794 54 aa6.35□□□□□ -1.39
PDPN-202ENST00000376057 C20orf197Q8N268 126 aa6.35□□□□□ -1.39
PDPN-202ENST00000376057 OCR1Q9BZK8 76 aa6.35□□□□□ -1.39
PDPN-202ENST00000376057 MMP24-AS1A0A0U1RRL7 71 aa6.35□□□□□ -1.39
PDPN-202ENST00000376057 C8orf87E5RJ46 101 aa6.35□□□□□ -1.39
PDPN-202ENST00000376057 KRTAP17-1Q9BYP8 105 aa6.34□□□□□ -1.4
PDPN-202ENST00000376057 C8orf17Q9NRJ1 99 aa6.34□□□□□ -1.4
PDPN-202ENST00000376057 CASC2Q6XLA1 102 aa6.33□□□□□ -1.4
PDPN-202ENST00000376057 H7BZZ5 65 aa6.32□□□□□ -1.4
PDPN-202ENST00000376057 TMEM254Q8TBM7 123 aa6.31□□□□□ -1.4
PDPN-202ENST00000376057 hDV103S1A0JD37 113 aa6.31□□□□□ -1.4
PDPN-202ENST00000376057 EPPK1P58107 5090 aaKnown RBP6.29□□□□□ -1.4
PDPN-202ENST00000376057 IGHV6-1A0A0B4J1U7 121 aa6.29□□□□□ -1.4
PDPN-202ENST00000376057 TP53AIP1Q9HCN2 124 aa6.28□□□□□ -1.4
PDPN-202ENST00000376057 TNXBP22105 4242 aa6.27□□□□□ -1.41
PDPN-202ENST00000376057 WFDC13Q8IUB5 93 aa6.27□□□□□ -1.41
PDPN-202ENST00000376057 MRPL34Q9BQ48 92 aaKnown RBP6.26□□□□□ -1.41
PDPN-202ENST00000376057 LINC00313P59037 77 aa6.26□□□□□ -1.41
PDPN-202ENST00000376057 KLKP1Q107X0 134 aa6.26□□□□□ -1.41
PDPN-202ENST00000376057 MPLKIPQ8TAP9 179 aa6.26□□□□□ -1.41
PDPN-202ENST00000376057 H3BPC8 53 aa6.24□□□□□ -1.41
PDPN-202ENST00000376057 NOTCH2NLQ7Z3S9 236 aa6.23□□□□□ -1.41
PDPN-202ENST00000376057 FAT3Q8TDW7 4589 aa6.23□□□□□ -1.41
PDPN-202ENST00000376057 KIAA1109Q2LD37 5005 aa6.23□□□□□ -1.41
PDPN-202ENST00000376057 KRTAP16-1A8MUX0 517 aa6.23□□□□□ -1.41
PDPN-202ENST00000376057 MT1HL1P0DM35 61 aa6.23□□□□□ -1.41
PDPN-202ENST00000376057 Q8N9P0 234 aaPredicted RBP6.23□□□□□ -1.41
PDPN-202ENST00000376057 SNURFQ9Y675 71 aa6.23□□□□□ -1.41
PDPN-202ENST00000376057 ATP5EP56381 51 aaPredicted RBP6.21□□□□□ -1.42
PDPN-202ENST00000376057 NDUFC1O43677 76 aa6.21□□□□□ -1.42
PDPN-202ENST00000376057 ZCCHC13Q8WW36 166 aaKnown RBP6.19□□□□□ -1.42
PDPN-202ENST00000376057 MP68P56378 58 aa6.17□□□□□ -1.42
PDPN-202ENST00000376057 TRAV22A0A0B4J277 110 aa6.17□□□□□ -1.42
PDPN-202ENST00000376057 KRTAP13-3Q3SY46 172 aa6.16□□□□□ -1.42
PDPN-202ENST00000376057 FLG2Q5D862 2391 aaPredicted RBP6.14□□□□□ -1.43
PDPN-202ENST00000376057 H0Y9P7 68 aa6.14□□□□□ -1.43
PDPN-202ENST00000376057 BIRC6Q9NR09 4857 aa6.14□□□□□ -1.43
PDPN-202ENST00000376057 LRP1Q07954 4544 aaKnown RBP6.14□□□□□ -1.43
PDPN-202ENST00000376057 KRTAP4-5Q9BYR2 181 aa6.13□□□□□ -1.43
PDPN-202ENST00000376057 C20orf166-AS1Q96NR2 134 aa6.12□□□□□ -1.43
PDPN-202ENST00000376057 RBM12B-AS1Q9P1G2 102 aa6.12□□□□□ -1.43
PDPN-202ENST00000376057 NDUFS5O43920 106 aa6.12□□□□□ -1.43
PDPN-202ENST00000376057 A8MUU9 505 aa6.12□□□□□ -1.43
PDPN-202ENST00000376057 KRTAP3-3Q9BYR6 98 aa6.11□□□□□ -1.43
PDPN-202ENST00000376057 KRTAP3-2Q9BYR7 98 aa6.11□□□□□ -1.43
PDPN-202ENST00000376057 HERC2O95714 4834 aa6.09□□□□□ -1.43
PDPN-202ENST00000376057 LOC101927531A0A1B0GV80 90 aa6.09□□□□□ -1.43
PDPN-202ENST00000376057 C1orf64Q8NEQ6 169 aa6.09□□□□□ -1.43
PDPN-202ENST00000376057 LINC00208Q96KT6 92 aa6.08□□□□□ -1.44
PDPN-202ENST00000376057 LCE2DQ5TA82 110 aaPredicted RBP6.08□□□□□ -1.44
PDPN-202ENST00000376057 Q5W150 140 aa6.08□□□□□ -1.44
PDPN-202ENST00000376057 RETNLBQ9BQ08 111 aa6.07□□□□□ -1.44
PDPN-202ENST00000376057 Q75L30 129 aa6.07□□□□□ -1.44
PDPN-202ENST00000376057 KTN1-AS1Q86SY8 53 aa6.07□□□□□ -1.44
PDPN-202ENST00000376057 SPANXA2-OT1Q8N9U9 137 aa6.05□□□□□ -1.44
PDPN-202ENST00000376057 IGLV7-46A0A075B6I9 117 aa6.05□□□□□ -1.44
PDPN-202ENST00000376057 Q1T7F1 81 aa6.04□□□□□ -1.44
PDPN-202ENST00000376057 PSPHP1O15172 72 aa6.03□□□□□ -1.44
PDPN-202ENST00000376057 MYCBP2O75592 4640 aa6.03□□□□□ -1.44
PDPN-202ENST00000376057 H3BS24 57 aa6.02□□□□□ -1.45
PDPN-202ENST00000376057 IGKV2-30P06310 120 aa6.02□□□□□ -1.45
PDPN-202ENST00000376057 CYP4F30PQ9H0H9 118 aa6.02□□□□□ -1.45
PDPN-202ENST00000376057 C9orf92A6NGG3 77 aa6.02□□□□□ -1.45
PDPN-202ENST00000376057 TPRXLQ17RH7 258 aa6.01□□□□□ -1.45
PDPN-202ENST00000376057 A8MU10 97 aa5.98□□□□□ -1.45
PDPN-202ENST00000376057 RPL37P61927 97 aaKnown RBP5.98□□□□□ -1.45
PDPN-202ENST00000376057 XP32Q5T750 250 aa5.97□□□□□ -1.45
PDPN-202ENST00000376057 ABCA13Q86UQ4 5058 aa5.97□□□□□ -1.45
PDPN-202ENST00000376057 A8MUN3 132 aa5.94□□□□□ -1.46
PDPN-202ENST00000376057 C7orf65Q6ZTY9 151 aa5.94□□□□□ -1.46
PDPN-202ENST00000376057 PRR4Q16378 134 aa5.93□□□□□ -1.46
PDPN-202ENST00000376057 SPTSSBQ8NFR3 76 aa5.93□□□□□ -1.46
PDPN-202ENST00000376057 DMBT1Q9UGM3 2413 aaPredicted RBP5.92□□□□□ -1.46
PDPN-202ENST00000376057 ATP11AUNQ6ZP68 121 aa5.91□□□□□ -1.46
PDPN-202ENST00000376057 PCOTHQ58A44 107 aa5.9□□□□□ -1.46
PDPN-202ENST00000376057 Q5VV11 94 aa5.89□□□□□ -1.47
PDPN-202ENST00000376057 HRES1P13985 223 aa5.89□□□□□ -1.47
PDPN-202ENST00000376057 CHKB-CPT1BH3BT56 60 aa5.88□□□□□ -1.47
PDPN-202ENST00000376057 A6NN06 94 aa5.88□□□□□ -1.47
PDPN-202ENST00000376057 IGKV2D-30A0A075B6S6 120 aa5.87□□□□□ -1.47
PDPN-202ENST00000376057 DMAC1Q96GE9 116 aa5.86□□□□□ -1.47
PDPN-202ENST00000376057 LCA10Q71F78 164 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms