RNA–Protein interactions for RNA: ENST00000375549.7

SDHD-201, Transcript of succinate dehydrogenase complex subunit D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHD, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-201ENST00000375549 ACYP1P07311 99 aa7.04□□□□□ -1.28
SDHD-201ENST00000375549 TNXBP22105 4242 aa7.04□□□□□ -1.28
SDHD-201ENST00000375549 FAM240AA0A1B0GVK7 77 aa7.03□□□□□ -1.28
SDHD-201ENST00000375549 RPS29P62273 56 aaKnown RBP7.03□□□□□ -1.28
SDHD-201ENST00000375549 NREPQ16612 68 aa7.03□□□□□ -1.28
SDHD-201ENST00000375549 UBL5Q9BZL1 73 aa7.02□□□□□ -1.29
SDHD-201ENST00000375549 KRTAP19-4Q3LI73 84 aa7.01□□□□□ -1.29
SDHD-201ENST00000375549 Q5XG85 94 aa7.01□□□□□ -1.29
SDHD-201ENST00000375549 Q6ZVQ6 151 aa7.01□□□□□ -1.29
SDHD-201ENST00000375549 DEFB116Q30KQ4 102 aa7□□□□□ -1.29
SDHD-201ENST00000375549 ASB16-AS1Q495Z4 193 aa6.99□□□□□ -1.29
SDHD-201ENST00000375549 C1orf195Q5TG92 126 aa6.97□□□□□ -1.29
SDHD-201ENST00000375549 Q96NJ1 140 aa6.97□□□□□ -1.29
SDHD-201ENST00000375549 RETNLBQ9BQ08 111 aa6.97□□□□□ -1.29
SDHD-201ENST00000375549 LINC00472Q9H8W2 130 aa6.97□□□□□ -1.29
SDHD-201ENST00000375549 BPY2O14599 106 aa6.94□□□□□ -1.3
SDHD-201ENST00000375549 IGKV4-1P06312 121 aa6.94□□□□□ -1.3
SDHD-201ENST00000375549 SIGMAR1Q99720 223 aa6.93□□□□□ -1.3
SDHD-201ENST00000375549 CDIP1Q9H305 208 aa6.93□□□□□ -1.3
SDHD-201ENST00000375549 J3KT08 172 aa6.92□□□□□ -1.3
SDHD-201ENST00000375549 IGKV3D-7A0A0C4DH55 119 aa6.91□□□□□ -1.3
SDHD-201ENST00000375549 LINC00643Q86TS7 51 aa6.91□□□□□ -1.3
SDHD-201ENST00000375549 DMBT1Q9UGM3 2413 aaPredicted RBP6.89□□□□□ -1.31
SDHD-201ENST00000375549 DSCR10P59022 87 aa6.89□□□□□ -1.31
SDHD-201ENST00000375549 CXCL6P80162 114 aa6.88□□□□□ -1.31
SDHD-201ENST00000375549 PRR4Q16378 134 aa6.88□□□□□ -1.31
SDHD-201ENST00000375549 KRTAP9-8Q9BYQ0 159 aa6.88□□□□□ -1.31
SDHD-201ENST00000375549 A8MWP4 228 aa6.87□□□□□ -1.31
SDHD-201ENST00000375549 NDUFB1O75438 58 aa6.87□□□□□ -1.31
SDHD-201ENST00000375549 ATP5EP2Q5VTU8 51 aa6.87□□□□□ -1.31
SDHD-201ENST00000375549 Q8N9L7 120 aa6.87□□□□□ -1.31
SDHD-201ENST00000375549 KRTAP9-3Q9BYQ3 159 aa6.87□□□□□ -1.31
SDHD-201ENST00000375549 K7EQZ3 153 aa6.86□□□□□ -1.31
SDHD-201ENST00000375549 FP248Q71RG6 208 aaPredicted RBP6.86□□□□□ -1.31
SDHD-201ENST00000375549 IGHV6-1A0A0B4J1U7 121 aa6.85□□□□□ -1.31
SDHD-201ENST00000375549 IGLV7-46A0A075B6I9 117 aa6.84□□□□□ -1.31
SDHD-201ENST00000375549 A0A1B0GVX0 72 aa6.84□□□□□ -1.31
SDHD-201ENST00000375549 PRR15Q8IV56 129 aa6.84□□□□□ -1.32
SDHD-201ENST00000375549 MT-ATP8P03928 68 aa6.83□□□□□ -1.32
SDHD-201ENST00000375549 HIST1H4AP62805 103 aaKnown RBP6.82□□□□□ -1.32
SDHD-201ENST00000375549 C9orf92A6NGG3 77 aa6.81□□□□□ -1.32
SDHD-201ENST00000375549 LINC00313P59037 77 aa6.79□□□□□ -1.32
SDHD-201ENST00000375549 NOTCH2NLQ7Z3S9 236 aa6.79□□□□□ -1.32
SDHD-201ENST00000375549 C8orf17Q9NRJ1 99 aa6.79□□□□□ -1.32
SDHD-201ENST00000375549 C8orf87E5RJ46 101 aa6.78□□□□□ -1.32
SDHD-201ENST00000375549 A0A087WVE0 104 aa6.76□□□□□ -1.33
SDHD-201ENST00000375549 MMP24-AS1A0A0U1RRL7 71 aa6.76□□□□□ -1.33
SDHD-201ENST00000375549 KRTAP13-3Q3SY46 172 aa6.76□□□□□ -1.33
SDHD-201ENST00000375549 WFDC13Q8IUB5 93 aa6.76□□□□□ -1.33
SDHD-201ENST00000375549 HCG22E2RYF7 251 aa6.75□□□□□ -1.33
SDHD-201ENST00000375549 TPRXLQ17RH7 258 aa6.74□□□□□ -1.33
SDHD-201ENST00000375549 CASC2Q6XLA1 102 aa6.74□□□□□ -1.33
SDHD-201ENST00000375549 IMUPQ9GZP8 106 aa6.74□□□□□ -1.33
SDHD-201ENST00000375549 hDV103S1A0JD37 113 aa6.73□□□□□ -1.33
SDHD-201ENST00000375549 HERC1Q15751 4861 aa6.72□□□□□ -1.33
SDHD-201ENST00000375549 KRTAP16-1A8MUX0 517 aa6.71□□□□□ -1.34
SDHD-201ENST00000375549 TMEM254Q8TBM7 123 aa6.7□□□□□ -1.34
SDHD-201ENST00000375549 MRPL34Q9BQ48 92 aaKnown RBP6.7□□□□□ -1.34
SDHD-201ENST00000375549 NDUFS5O43920 106 aa6.67□□□□□ -1.34
SDHD-201ENST00000375549 FAM236AA0A1B0GUQ0 79 aa6.65□□□□□ -1.35
SDHD-201ENST00000375549 FAM236BA0A1B0GV22 79 aa6.65□□□□□ -1.35
SDHD-201ENST00000375549 A8MUU9 505 aa6.64□□□□□ -1.35
SDHD-201ENST00000375549 SCGB1A1P11684 91 aa6.64□□□□□ -1.35
SDHD-201ENST00000375549 Q8N9P0 234 aaPredicted RBP6.64□□□□□ -1.35
SDHD-201ENST00000375549 C20orf166-AS1Q96NR2 134 aa6.64□□□□□ -1.35
SDHD-201ENST00000375549 HMCN2Q8NDA2 5059 aa6.63□□□□□ -1.35
SDHD-201ENST00000375549 LPAP08519 4548 aa6.63□□□□□ -1.35
SDHD-201ENST00000375549 Q75L30 129 aa6.62□□□□□ -1.35
SDHD-201ENST00000375549 RPL37P61927 97 aaKnown RBP6.61□□□□□ -1.35
SDHD-201ENST00000375549 ATP11AUNQ6ZP68 121 aa6.58□□□□□ -1.36
SDHD-201ENST00000375549 TP53AIP1Q9HCN2 124 aa6.58□□□□□ -1.36
SDHD-201ENST00000375549 UBR4Q5T4S7 5183 aa6.58□□□□□ -1.36
SDHD-201ENST00000375549 ATOX1O00244 68 aa6.55□□□□□ -1.36
SDHD-201ENST00000375549 ZCCHC13Q8WW36 166 aaKnown RBP6.55□□□□□ -1.36
SDHD-201ENST00000375549 OCR1Q9BZK8 76 aa6.55□□□□□ -1.36
SDHD-201ENST00000375549 UQCRQO14949 82 aa6.54□□□□□ -1.36
SDHD-201ENST00000375549 PCOTHQ58A44 107 aa6.54□□□□□ -1.36
SDHD-201ENST00000375549 SEC61BP60468 96 aaKnown RBP6.53□□□□□ -1.36
SDHD-201ENST00000375549 Q5W150 140 aa6.53□□□□□ -1.36
SDHD-201ENST00000375549 SMIM20Q8N5G0 67 aa6.52□□□□□ -1.37
SDHD-201ENST00000375549 LRP2P98164 4655 aa6.51□□□□□ -1.37
SDHD-201ENST00000375549 TRAV7A0A075B6U4 112 aa6.5□□□□□ -1.37
SDHD-201ENST00000375549 TRAV22A0A0B4J277 110 aa6.5□□□□□ -1.37
SDHD-201ENST00000375549 H0Y9P7 68 aa6.49□□□□□ -1.37
SDHD-201ENST00000375549 C5orf47Q569G3 176 aa6.46□□□□□ -1.38
SDHD-201ENST00000375549 SERP2Q8N6R1 65 aa6.46□□□□□ -1.38
SDHD-201ENST00000375549 MP68P56378 58 aa6.45□□□□□ -1.38
SDHD-201ENST00000375549 ANAPC13Q9BS18 74 aa6.45□□□□□ -1.38
SDHD-201ENST00000375549 PCP4P48539 62 aa6.44□□□□□ -1.38
SDHD-201ENST00000375549 IGKV2D-30A0A075B6S6 120 aa6.43□□□□□ -1.38
SDHD-201ENST00000375549 IGKV2-30P06310 120 aa6.43□□□□□ -1.38
SDHD-201ENST00000375549 LINC00208Q96KT6 92 aa6.43□□□□□ -1.38
SDHD-201ENST00000375549 MUC17Q685J3 4493 aa6.43□□□□□ -1.38
SDHD-201ENST00000375549 SPINK7P58062 85 aa6.42□□□□□ -1.38
SDHD-201ENST00000375549 C1orf64Q8NEQ6 169 aa6.42□□□□□ -1.38
SDHD-201ENST00000375549 LOC101927531A0A1B0GV80 90 aa6.4□□□□□ -1.39
SDHD-201ENST00000375549 COX7CP15954 63 aa6.4□□□□□ -1.39
SDHD-201ENST00000375549 C7orf65Q6ZTY9 151 aa6.4□□□□□ -1.39
SDHD-201ENST00000375549 H3BPC8 53 aa6.39□□□□□ -1.39
SDHD-201ENST00000375549 KRTAP4-1Q9BYQ7 146 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms