RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 ASB16-AS1Q495Z4 193 aa9.22□□□□□ -0.93
TMEM50A-201ENST00000374358 H3BPC8 53 aa9.21□□□□□ -0.94
TMEM50A-201ENST00000374358 KRTAP10-2P60368 255 aa9.2□□□□□ -0.94
TMEM50A-201ENST00000374358 CIRBP-AS1Q8TBR5 109 aa9.2□□□□□ -0.94
TMEM50A-201ENST00000374358 HYDINQ4G0P3 5121 aa9.2□□□□□ -0.94
TMEM50A-201ENST00000374358 IGLV7-43P04211 117 aa9.2□□□□□ -0.94
TMEM50A-201ENST00000374358 Q1T7F1 81 aa9.2□□□□□ -0.94
TMEM50A-201ENST00000374358 CDK2AP2O75956 126 aa9.19□□□□□ -0.94
TMEM50A-201ENST00000374358 SPANXA2-OT1Q8N9U9 137 aa9.18□□□□□ -0.94
TMEM50A-201ENST00000374358 CD164Q04900 197 aa9.18□□□□□ -0.94
TMEM50A-201ENST00000374358 LRP1BQ9NZR2 4599 aa9.17□□□□□ -0.94
TMEM50A-201ENST00000374358 A8MUN3 132 aa9.15□□□□□ -0.94
TMEM50A-201ENST00000374358 MRPL34Q9BQ48 92 aaKnown RBP9.15□□□□□ -0.95
TMEM50A-201ENST00000374358 TP53AIP1Q9HCN2 124 aa9.13□□□□□ -0.95
TMEM50A-201ENST00000374358 PKD1P98161 4303 aa9.12□□□□□ -0.95
TMEM50A-201ENST00000374358 IGLV7-46A0A075B6I9 117 aa9.11□□□□□ -0.95
TMEM50A-201ENST00000374358 COA5Q86WW8 74 aa9.11□□□□□ -0.95
TMEM50A-201ENST00000374358 FAT2Q9NYQ8 4349 aa9.1□□□□□ -0.95
TMEM50A-201ENST00000374358 Q5W150 140 aa9.09□□□□□ -0.95
TMEM50A-201ENST00000374358 A8MU10 97 aa9.08□□□□□ -0.96
TMEM50A-201ENST00000374358 KRTAP21-3Q3LHN1 58 aa9.08□□□□□ -0.96
TMEM50A-201ENST00000374358 Q8N9P0 234 aaPredicted RBP9.08□□□□□ -0.96
TMEM50A-201ENST00000374358 VPS13BQ7Z7G8 4022 aa9.08□□□□□ -0.96
TMEM50A-201ENST00000374358 KRTAP10-1P60331 282 aa9.06□□□□□ -0.96
TMEM50A-201ENST00000374358 Q5VV11 94 aa9.06□□□□□ -0.96
TMEM50A-201ENST00000374358 KRTAP13-2Q52LG2 175 aa9.04□□□□□ -0.96
TMEM50A-201ENST00000374358 PMAIP1Q13794 54 aa9.03□□□□□ -0.96
TMEM50A-201ENST00000374358 PRR15LQ9BU68 103 aa9.03□□□□□ -0.96
TMEM50A-201ENST00000374358 RETNLBQ9BQ08 111 aa9.02□□□□□ -0.97
TMEM50A-201ENST00000374358 PKHD1P08F94 4074 aa9.01□□□□□ -0.97
TMEM50A-201ENST00000374358 KRTAP13-3Q3SY46 172 aa8.99□□□□□ -0.97
TMEM50A-201ENST00000374358 SSBP3-AS1Q7Z2R9 100 aa8.99□□□□□ -0.97
TMEM50A-201ENST00000374358 HRES1P13985 223 aa8.98□□□□□ -0.97
TMEM50A-201ENST00000374358 SPAG11AQ6PDA7 123 aa8.98□□□□□ -0.97
TMEM50A-201ENST00000374358 CHKB-CPT1BH3BT56 60 aa8.98□□□□□ -0.97
TMEM50A-201ENST00000374358 Q6ZSA8 131 aa8.96□□□□□ -0.97
TMEM50A-201ENST00000374358 LIMD2Q9BT23 127 aa8.96□□□□□ -0.98
TMEM50A-201ENST00000374358 LOC101927531A0A1B0GV80 90 aa8.93□□□□□ -0.98
TMEM50A-201ENST00000374358 LINC00313P59037 77 aa8.92□□□□□ -0.98
TMEM50A-201ENST00000374358 KRTAP1-4P0C5Y4 121 aa8.92□□□□□ -0.98
TMEM50A-201ENST00000374358 PRR26Q8N8Z3 221 aa8.9□□□□□ -0.98
TMEM50A-201ENST00000374358 C8orf87E5RJ46 101 aa8.89□□□□□ -0.99
TMEM50A-201ENST00000374358 A6NED7 52 aa8.86□□□□□ -0.99
TMEM50A-201ENST00000374358 Q75L30 129 aa8.85□□□□□ -0.99
TMEM50A-201ENST00000374358 LCA10Q71F78 164 aa8.84□□□□□ -0.99
TMEM50A-201ENST00000374358 KRTAP16-1A8MUX0 517 aa8.83□□□□□ -1
TMEM50A-201ENST00000374358 PLA2G1BP04054 148 aaKnown RBP8.83□□□□□ -1
TMEM50A-201ENST00000374358 SACSQ9NZJ4 4579 aa8.82□□□□□ -1
TMEM50A-201ENST00000374358 LINC01558Q9Y6Z2 57 aa8.82□□□□□ -1
TMEM50A-201ENST00000374358 FAM229AH3BQW9 127 aa8.81□□□□□ -1
TMEM50A-201ENST00000374358 SPTSSBQ8NFR3 76 aa8.8□□□□□ -1
TMEM50A-201ENST00000374358 TYMSOSQ8TAI1 123 aa8.78□□□□□ -1
TMEM50A-201ENST00000374358 SPINK7P58062 85 aa8.78□□□□□ -1
TMEM50A-201ENST00000374358 FAT1Q14517 4588 aa8.77□□□□□ -1.01
TMEM50A-201ENST00000374358 IGKV2D-30A0A075B6S6 120 aa8.77□□□□□ -1.01
TMEM50A-201ENST00000374358 IGKV2-30P06310 120 aa8.77□□□□□ -1.01
TMEM50A-201ENST00000374358 ACYP2P14621 99 aa8.76□□□□□ -1.01
TMEM50A-201ENST00000374358 DMAC1Q96GE9 116 aa8.75□□□□□ -1.01
TMEM50A-201ENST00000374358 DYNC1H1Q14204 4646 aaKnown RBP8.75□□□□□ -1.01
TMEM50A-201ENST00000374358 SMR3BP02814 79 aaPredicted RBP8.75□□□□□ -1.01
TMEM50A-201ENST00000374358 C4orf48Q5BLP8 95 aa8.74□□□□□ -1.01
TMEM50A-201ENST00000374358 CDC42SE1Q9NRR8 79 aa8.68□□□□□ -1.02
TMEM50A-201ENST00000374358 RBM12B-AS1Q9P1G2 102 aa8.68□□□□□ -1.02
TMEM50A-201ENST00000374358 SPINK1P00995 79 aa8.67□□□□□ -1.02
TMEM50A-201ENST00000374358 KTN1-AS1Q86SY8 53 aa8.66□□□□□ -1.02
TMEM50A-201ENST00000374358 LINC00304Q8N9R0 145 aa8.65□□□□□ -1.03
TMEM50A-201ENST00000374358 ATP11AUNQ6ZP68 121 aa8.63□□□□□ -1.03
TMEM50A-201ENST00000374358 APOBP04114 4563 aaKnown RBP8.63□□□□□ -1.03
TMEM50A-201ENST00000374358 C7orf65Q6ZTY9 151 aa8.62□□□□□ -1.03
TMEM50A-201ENST00000374358 C9orf92A6NGG3 77 aa8.59□□□□□ -1.03
TMEM50A-201ENST00000374358 Q8N1X5 172 aa8.59□□□□□ -1.03
TMEM50A-201ENST00000374358 A6NN06 94 aa8.57□□□□□ -1.04
TMEM50A-201ENST00000374358 A0A1B0GU69 56 aa8.57□□□□□ -1.04
TMEM50A-201ENST00000374358 KMT2CQ8NEZ4 4911 aaKnown RBP8.56□□□□□ -1.04
TMEM50A-201ENST00000374358 PKHD1L1Q86WI1 4243 aa8.55□□□□□ -1.04
TMEM50A-201ENST00000374358 KRTAP10-4P60372 401 aaPredicted RBP8.51□□□□□ -1.05
TMEM50A-201ENST00000374358 A0A1B0GVY2 172 aa8.5□□□□□ -1.05
TMEM50A-201ENST00000374358 RYR2Q92736 4967 aa8.49□□□□□ -1.05
TMEM50A-201ENST00000374358 LRP1Q07954 4544 aaKnown RBP8.47□□□□□ -1.05
TMEM50A-201ENST00000374358 RPS29P62273 56 aaKnown RBP8.47□□□□□ -1.05
TMEM50A-201ENST00000374358 FLG2Q5D862 2391 aaPredicted RBP8.43□□□□□ -1.06
TMEM50A-201ENST00000374358 C20orf166-AS1Q96NR2 134 aa8.39□□□□□ -1.07
TMEM50A-201ENST00000374358 A8MUU9 505 aa8.39□□□□□ -1.07
TMEM50A-201ENST00000374358 MIR22HGQ0VDD5 57 aa8.38□□□□□ -1.07
TMEM50A-201ENST00000374358 UQCR11O14957 56 aa8.37□□□□□ -1.07
TMEM50A-201ENST00000374358 SPATA8Q6RVD6 105 aa8.37□□□□□ -1.07
TMEM50A-201ENST00000374358 KRTAP3-1Q9BYR8 98 aa8.36□□□□□ -1.07
TMEM50A-201ENST00000374358 PRAC1Q96KF2 57 aa8.34□□□□□ -1.07
TMEM50A-201ENST00000374358 MYCBP2O75592 4640 aa8.33□□□□□ -1.08
TMEM50A-201ENST00000374358 TNXBP22105 4242 aa8.33□□□□□ -1.08
TMEM50A-201ENST00000374358 ADM2Q7Z4H4 148 aa8.32□□□□□ -1.08
TMEM50A-201ENST00000374358 FAT3Q8TDW7 4589 aa8.32□□□□□ -1.08
TMEM50A-201ENST00000374358 DMBT1Q9UGM3 2413 aaPredicted RBP8.31□□□□□ -1.08
TMEM50A-201ENST00000374358 HSPG2P98160 4391 aa8.3□□□□□ -1.08
TMEM50A-201ENST00000374358 RYR3Q15413 4870 aa8.24□□□□□ -1.09
TMEM50A-201ENST00000374358 H0YAA0 97 aa8.19□□□□□ -1.1
TMEM50A-201ENST00000374358 Q5VSD8 79 aa8.17□□□□□ -1.1
TMEM50A-201ENST00000374358 KRTAP17-1Q9BYP8 105 aa8.17□□□□□ -1.1
TMEM50A-201ENST00000374358 H3BS24 57 aa8.16□□□□□ -1.1
TMEM50A-201ENST00000374358 LINC01554Q52M75 96 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms