RNA–Protein interactions for RNA: ENST00000374257.5

PTBP3-205, Transcript of polypyrimidine tract binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PTBP3, Length 7,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-205ENST00000374257 S4R3F8 94 aa4.73□□□□□ -1.65
PTBP3-205ENST00000374257 PSPHP1O15172 72 aa4.73□□□□□ -1.65
PTBP3-205ENST00000374257 HRES1P13985 223 aa4.72□□□□□ -1.65
PTBP3-205ENST00000374257 Q5W150 140 aa4.72□□□□□ -1.65
PTBP3-205ENST00000374257 RPL37P61927 97 aaKnown RBP4.7□□□□□ -1.66
PTBP3-205ENST00000374257 Q8N9P0 234 aaPredicted RBP4.7□□□□□ -1.66
PTBP3-205ENST00000374257 SRRM2Q9UQ35 2752 aaKnown RBP4.7□□□□□ -1.66
PTBP3-205ENST00000374257 KRTAP1-4P0C5Y4 121 aa4.69□□□□□ -1.66
PTBP3-205ENST00000374257 SVIPQ8NHG7 77 aa4.69□□□□□ -1.66
PTBP3-205ENST00000374257 LAMA5O15230 3695 aa4.69□□□□□ -1.66
PTBP3-205ENST00000374257 Q75L30 129 aa4.69□□□□□ -1.66
PTBP3-205ENST00000374257 CYP4F30PQ9H0H9 118 aa4.68□□□□□ -1.66
PTBP3-205ENST00000374257 NBPF19A0A087WUL8 3843 aa4.67□□□□□ -1.66
PTBP3-205ENST00000374257 KLKP1Q107X0 134 aa4.67□□□□□ -1.66
PTBP3-205ENST00000374257 SPANXA2-OT1Q8N9U9 137 aa4.67□□□□□ -1.66
PTBP3-205ENST00000374257 CAMK2N1Q7Z7J9 78 aa4.67□□□□□ -1.66
PTBP3-205ENST00000374257 OCR1Q9BZK8 76 aa4.66□□□□□ -1.66
PTBP3-205ENST00000374257 UQCR11O14957 56 aa4.65□□□□□ -1.66
PTBP3-205ENST00000374257 SPINT4Q6UDR6 99 aa4.64□□□□□ -1.67
PTBP3-205ENST00000374257 R4GN34 69 aa4.64□□□□□ -1.67
PTBP3-205ENST00000374257 TPRXLQ17RH7 258 aa4.64□□□□□ -1.67
PTBP3-205ENST00000374257 A0A0D9SG42 100 aa4.62□□□□□ -1.67
PTBP3-205ENST00000374257 SMG1Q96Q15 3661 aaKnown RBP4.62□□□□□ -1.67
PTBP3-205ENST00000374257 H1FX-AS1Q4G0G2 97 aa4.6□□□□□ -1.67
PTBP3-205ENST00000374257 C20orf166-AS1Q96NR2 134 aa4.6□□□□□ -1.67
PTBP3-205ENST00000374257 KRTAP10-8P60410 259 aa4.6□□□□□ -1.67
PTBP3-205ENST00000374257 NOTCH2NLQ7Z3S9 236 aa4.58□□□□□ -1.68
PTBP3-205ENST00000374257 ANK3Q12955 4377 aaKnown RBP4.58□□□□□ -1.68
PTBP3-205ENST00000374257 XP32Q5T750 250 aa4.58□□□□□ -1.68
PTBP3-205ENST00000374257 DMDP11532 3685 aa4.58□□□□□ -1.68
PTBP3-205ENST00000374257 ASPMQ8IZT6 3477 aa4.56□□□□□ -1.68
PTBP3-205ENST00000374257 LCA10Q71F78 164 aa4.56□□□□□ -1.68
PTBP3-205ENST00000374257 WDFY3Q8IZQ1 3526 aa4.56□□□□□ -1.68
PTBP3-205ENST00000374257 A8MUU9 505 aa4.55□□□□□ -1.68
PTBP3-205ENST00000374257 MIR22HGQ0VDD5 57 aa4.55□□□□□ -1.68
PTBP3-205ENST00000374257 H7BZZ5 65 aa4.55□□□□□ -1.68
PTBP3-205ENST00000374257 A0A1B0GU33 70 aa4.55□□□□□ -1.68
PTBP3-205ENST00000374257 PMAIP1Q13794 54 aa4.55□□□□□ -1.68
PTBP3-205ENST00000374257 PLAC4Q8WY50 150 aa4.54□□□□□ -1.68
PTBP3-205ENST00000374257 M0QZ58 72 aa4.53□□□□□ -1.68
PTBP3-205ENST00000374257 KRTAP13-3Q3SY46 172 aa4.51□□□□□ -1.69
PTBP3-205ENST00000374257 CRIPTQ9P021 101 aa4.51□□□□□ -1.69
PTBP3-205ENST00000374257 RPS28P62857 69 aaKnown RBP4.51□□□□□ -1.69
PTBP3-205ENST00000374257 CSMD1Q96PZ7 3565 aa4.5□□□□□ -1.69
PTBP3-205ENST00000374257 DMAC1Q96GE9 116 aa4.48□□□□□ -1.69
PTBP3-205ENST00000374257 DNHD1Q96M86 4753 aa4.48□□□□□ -1.69
PTBP3-205ENST00000374257 ADM2Q7Z4H4 148 aa4.48□□□□□ -1.69
PTBP3-205ENST00000374257 MEGF8Q7Z7M0 2845 aa4.46□□□□□ -1.7
PTBP3-205ENST00000374257 CDC42SE1Q9NRR8 79 aa4.45□□□□□ -1.7
PTBP3-205ENST00000374257 ZFHX4Q86UP3 3567 aa4.44□□□□□ -1.7
PTBP3-205ENST00000374257 CSMD2Q7Z408 3487 aa4.43□□□□□ -1.7
PTBP3-205ENST00000374257 COL7A1Q02388 2944 aa4.39□□□□□ -1.71
PTBP3-205ENST00000374257 KRTAP10-10P60014 251 aa4.37□□□□□ -1.71
PTBP3-205ENST00000374257 LINC01558Q9Y6Z2 57 aa4.36□□□□□ -1.71
PTBP3-205ENST00000374257 TRRAPQ9Y4A5 3859 aa4.36□□□□□ -1.71
PTBP3-205ENST00000374257 KRTAP4-5Q9BYR2 181 aa4.35□□□□□ -1.71
PTBP3-205ENST00000374257 MT1HL1P0DM35 61 aa4.34□□□□□ -1.72
PTBP3-205ENST00000374257 Q1T7F1 81 aa4.3□□□□□ -1.72
PTBP3-205ENST00000374257 PRO0628Q9UI54 55 aa4.3□□□□□ -1.72
PTBP3-205ENST00000374257 KRTAP16-1A8MUX0 517 aa4.3□□□□□ -1.72
PTBP3-205ENST00000374257 SPENQ96T58 3664 aaKnown RBP4.29□□□□□ -1.72
PTBP3-205ENST00000374257 KRTAP10-4P60372 401 aaPredicted RBP4.25□□□□□ -1.73
PTBP3-205ENST00000374257 SPATA8Q6RVD6 105 aa4.24□□□□□ -1.73
PTBP3-205ENST00000374257 PRO2289Q9P1D8 64 aa4.2□□□□□ -1.74
PTBP3-205ENST00000374257 CYSTM1Q9H1C7 97 aa4.2□□□□□ -1.74
PTBP3-205ENST00000374257 BSNQ9UPA5 3926 aa4.19□□□□□ -1.74
PTBP3-205ENST00000374257 HUWE1Q7Z6Z7 4374 aaKnown RBP4.18□□□□□ -1.74
PTBP3-205ENST00000374257 ALMS1Q8TCU4 4167 aa4.18□□□□□ -1.74
PTBP3-205ENST00000374257 DNAH11Q96DT5 4516 aa4.15□□□□□ -1.74
PTBP3-205ENST00000374257 DNAH9Q9NYC9 4486 aa4.15□□□□□ -1.75
PTBP3-205ENST00000374257 ROMO1P60602 79 aa4.14□□□□□ -1.75
PTBP3-205ENST00000374257 Q5VV11 94 aa4.14□□□□□ -1.75
PTBP3-205ENST00000374257 DNAH5Q8TE73 4624 aa4.14□□□□□ -1.75
PTBP3-205ENST00000374257 TNP1P09430 55 aa4.13□□□□□ -1.75
PTBP3-205ENST00000374257 PLECQ15149 4684 aaKnown RBP4.11□□□□□ -1.75
PTBP3-205ENST00000374257 CUBNO60494 3623 aa4.11□□□□□ -1.75
PTBP3-205ENST00000374257 LUZP6Q538Z0 58 aa4.1□□□□□ -1.75
PTBP3-205ENST00000374257 A8MU10 97 aa4.09□□□□□ -1.75
PTBP3-205ENST00000374257 AKAP9Q99996 3911 aa4.09□□□□□ -1.75
PTBP3-205ENST00000374257 SVEP1Q4LDE5 3571 aa4.09□□□□□ -1.75
PTBP3-205ENST00000374257 BIRC6Q9NR09 4857 aa4.06□□□□□ -1.76
PTBP3-205ENST00000374257 KIAA1109Q2LD37 5005 aa4.06□□□□□ -1.76
PTBP3-205ENST00000374257 RYR1P21817 5038 aa4.06□□□□□ -1.76
PTBP3-205ENST00000374257 KTN1-AS1Q86SY8 53 aa4.03□□□□□ -1.76
PTBP3-205ENST00000374257 DNAH10Q8IVF4 4471 aa4.03□□□□□ -1.76
PTBP3-205ENST00000374257 DYNC1H1Q14204 4646 aaKnown RBP4.02□□□□□ -1.77
PTBP3-205ENST00000374257 P0C880 135 aa4.01□□□□□ -1.77
PTBP3-205ENST00000374257 H0YAA0 97 aa3.98□□□□□ -1.77
PTBP3-205ENST00000374257 DNAH1Q9P2D7 4330 aa3.98□□□□□ -1.77
PTBP3-205ENST00000374257 ZNF469Q96JG9 3925 aaPredicted RBP3.98□□□□□ -1.77
PTBP3-205ENST00000374257 A6NN06 94 aa3.97□□□□□ -1.77
PTBP3-205ENST00000374257 RYR3Q15413 4870 aa3.96□□□□□ -1.78
PTBP3-205ENST00000374257 RYR2Q92736 4967 aa3.92□□□□□ -1.78
PTBP3-205ENST00000374257 KRTAP25-1Q3LHN0 102 aa3.91□□□□□ -1.78
PTBP3-205ENST00000374257 PRAC1Q96KF2 57 aa3.9□□□□□ -1.78
PTBP3-205ENST00000374257 PP632Q6XCG6 107 aa3.9□□□□□ -1.79
PTBP3-205ENST00000374257 KRTAP3-1Q9BYR8 98 aa3.9□□□□□ -1.79
PTBP3-205ENST00000374257 VPS13DQ5THJ4 4388 aa3.9□□□□□ -1.79
PTBP3-205ENST00000374257 ANK2Q01484 3957 aa3.89□□□□□ -1.79
PTBP3-205ENST00000374257 PRKDCP78527 4128 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms