RNA–Protein interactions for RNA: ENST00000373645.3

SP140-202, Transcript of SP140 nuclear body protein, humanhuman

TSL 1 (best) BASIC

Gene SP140, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-202ENST00000373645 CD164Q04900 197 aa4.44□□□□□ -1.7
SP140-202ENST00000373645 Q6Q795 121 aa4.44□□□□□ -1.7
SP140-202ENST00000373645 Q6ZQT0 140 aa4.44□□□□□ -1.7
SP140-202ENST00000373645 LINC00304Q8N9R0 145 aa4.44□□□□□ -1.7
SP140-202ENST00000373645 HRCT1Q6UXD1 115 aa4.43□□□□□ -1.7
SP140-202ENST00000373645 A0A1B0GW54 56 aa4.42□□□□□ -1.7
SP140-202ENST00000373645 SPINK1P00995 79 aa4.42□□□□□ -1.7
SP140-202ENST00000373645 RETNLBQ9BQ08 111 aa4.42□□□□□ -1.7
SP140-202ENST00000373645 VPS25Q9BRG1 176 aa4.42□□□□□ -1.7
SP140-202ENST00000373645 TRBV7-7A0A0K0K1E9 115 aa4.41□□□□□ -1.7
SP140-202ENST00000373645 RPS29P62273 56 aaKnown RBP4.4□□□□□ -1.71
SP140-202ENST00000373645 A0A087WSZ3 146 aa4.39□□□□□ -1.71
SP140-202ENST00000373645 Q5XG85 94 aa4.39□□□□□ -1.71
SP140-202ENST00000373645 LIMD2Q9BT23 127 aa4.39□□□□□ -1.71
SP140-202ENST00000373645 J3QR89 54 aa4.37□□□□□ -1.71
SP140-202ENST00000373645 ACYP1P07311 99 aa4.37□□□□□ -1.71
SP140-202ENST00000373645 ASB16-AS1Q495Z4 193 aa4.37□□□□□ -1.71
SP140-202ENST00000373645 CRCT1Q9UGL9 99 aa4.37□□□□□ -1.71
SP140-202ENST00000373645 SS18L2Q9UHA2 77 aa4.37□□□□□ -1.71
SP140-202ENST00000373645 NREPQ16612 68 aa4.36□□□□□ -1.71
SP140-202ENST00000373645 FAM240AA0A1B0GVK7 77 aa4.35□□□□□ -1.71
SP140-202ENST00000373645 LINC00846Q9NV44 126 aa4.35□□□□□ -1.71
SP140-202ENST00000373645 KRTAP4-1Q9BYQ7 146 aa4.34□□□□□ -1.71
SP140-202ENST00000373645 UBL5Q9BZL1 73 aa4.34□□□□□ -1.71
SP140-202ENST00000373645 CDIP1Q9H305 208 aa4.34□□□□□ -1.71
SP140-202ENST00000373645 FSIP2Q5CZC0 6907 aa4.33□□□□□ -1.72
SP140-202ENST00000373645 K7ERU9 68 aa4.33□□□□□ -1.72
SP140-202ENST00000373645 TPRXLQ17RH7 258 aa4.33□□□□□ -1.72
SP140-202ENST00000373645 C1orf195Q5TG92 126 aa4.33□□□□□ -1.72
SP140-202ENST00000373645 Q6ZVQ6 151 aa4.33□□□□□ -1.72
SP140-202ENST00000373645 MUC17Q685J3 4493 aa4.33□□□□□ -1.72
SP140-202ENST00000373645 IGLV7-46A0A075B6I9 117 aa4.32□□□□□ -1.72
SP140-202ENST00000373645 Q96NJ1 140 aa4.32□□□□□ -1.72
SP140-202ENST00000373645 LINC00472Q9H8W2 130 aa4.32□□□□□ -1.72
SP140-202ENST00000373645 J3KT08 172 aa4.31□□□□□ -1.72
SP140-202ENST00000373645 IGKV4-1P06312 121 aa4.3□□□□□ -1.72
SP140-202ENST00000373645 DEFB116Q30KQ4 102 aa4.3□□□□□ -1.72
SP140-202ENST00000373645 BPY2O14599 106 aa4.29□□□□□ -1.72
SP140-202ENST00000373645 FP248Q71RG6 208 aaPredicted RBP4.29□□□□□ -1.72
SP140-202ENST00000373645 SIGMAR1Q99720 223 aa4.29□□□□□ -1.72
SP140-202ENST00000373645 NDUFB1O75438 58 aa4.27□□□□□ -1.73
SP140-202ENST00000373645 LINC00643Q86TS7 51 aa4.27□□□□□ -1.73
SP140-202ENST00000373645 CXCL6P80162 114 aa4.26□□□□□ -1.73
SP140-202ENST00000373645 A8MWP4 228 aa4.25□□□□□ -1.73
SP140-202ENST00000373645 DSCR10P59022 87 aa4.25□□□□□ -1.73
SP140-202ENST00000373645 ATP5EP2Q5VTU8 51 aa4.25□□□□□ -1.73
SP140-202ENST00000373645 IGKV3D-7A0A0C4DH55 119 aa4.24□□□□□ -1.73
SP140-202ENST00000373645 A0A1B0GVX0 72 aa4.24□□□□□ -1.73
SP140-202ENST00000373645 KRTAP13-3Q3SY46 172 aa4.24□□□□□ -1.73
SP140-202ENST00000373645 PRR15Q8IV56 129 aa4.24□□□□□ -1.73
SP140-202ENST00000373645 IGHV6-1A0A0B4J1U7 121 aa4.23□□□□□ -1.73
SP140-202ENST00000373645 C8orf87E5RJ46 101 aa4.22□□□□□ -1.73
SP140-202ENST00000373645 K7EQZ3 153 aa4.22□□□□□ -1.73
SP140-202ENST00000373645 LINC00313P59037 77 aa4.22□□□□□ -1.73
SP140-202ENST00000373645 KRTAP19-2Q3LHN2 52 aa4.22□□□□□ -1.73
SP140-202ENST00000373645 Q8N9L7 120 aa4.21□□□□□ -1.74
SP140-202ENST00000373645 C9orf92A6NGG3 77 aa4.2□□□□□ -1.74
SP140-202ENST00000373645 MT1HP80294 61 aa4.2□□□□□ -1.74
SP140-202ENST00000373645 NOTCH2NLQ7Z3S9 236 aa4.2□□□□□ -1.74
SP140-202ENST00000373645 C8orf17Q9NRJ1 99 aa4.2□□□□□ -1.74
SP140-202ENST00000373645 HIST1H4AP62805 103 aaKnown RBP4.19□□□□□ -1.74
SP140-202ENST00000373645 MMP24-AS1A0A0U1RRL7 71 aa4.18□□□□□ -1.74
SP140-202ENST00000373645 MT-ATP8P03928 68 aa4.18□□□□□ -1.74
SP140-202ENST00000373645 IMUPQ9GZP8 106 aa4.18□□□□□ -1.74
SP140-202ENST00000373645 hDV103S1A0JD37 113 aa4.17□□□□□ -1.74
SP140-202ENST00000373645 KRTAP16-1A8MUX0 517 aa4.16□□□□□ -1.74
SP140-202ENST00000373645 HCG22E2RYF7 251 aa4.16□□□□□ -1.74
SP140-202ENST00000373645 SEC61BP60468 96 aaKnown RBP4.16□□□□□ -1.74
SP140-202ENST00000373645 CASC2Q6XLA1 102 aa4.16□□□□□ -1.74
SP140-202ENST00000373645 A0A087WVE0 104 aa4.15□□□□□ -1.75
SP140-202ENST00000373645 WFDC13Q8IUB5 93 aa4.15□□□□□ -1.75
SP140-202ENST00000373645 TMEM254Q8TBM7 123 aa4.15□□□□□ -1.75
SP140-202ENST00000373645 MRPL34Q9BQ48 92 aaKnown RBP4.15□□□□□ -1.75
SP140-202ENST00000373645 KRTAP10-6P60371 365 aaPredicted RBP4.14□□□□□ -1.75
SP140-202ENST00000373645 Q8N9P0 234 aaPredicted RBP4.14□□□□□ -1.75
SP140-202ENST00000373645 C20orf166-AS1Q96NR2 134 aa4.14□□□□□ -1.75
SP140-202ENST00000373645 A8MUU9 505 aa4.13□□□□□ -1.75
SP140-202ENST00000373645 Q75L30 129 aa4.13□□□□□ -1.75
SP140-202ENST00000373645 KRTAP3-1Q9BYR8 98 aa4.13□□□□□ -1.75
SP140-202ENST00000373645 NDUFS5O43920 106 aa4.11□□□□□ -1.75
SP140-202ENST00000373645 RPL37P61927 97 aaKnown RBP4.11□□□□□ -1.75
SP140-202ENST00000373645 PCOTHQ58A44 107 aa4.1□□□□□ -1.75
SP140-202ENST00000373645 ATP11AUNQ6ZP68 121 aa4.09□□□□□ -1.75
SP140-202ENST00000373645 SCGB1A1P11684 91 aa4.08□□□□□ -1.76
SP140-202ENST00000373645 TP53AIP1Q9HCN2 124 aa4.08□□□□□ -1.76
SP140-202ENST00000373645 FAM236AA0A1B0GUQ0 79 aa4.07□□□□□ -1.76
SP140-202ENST00000373645 FAM236BA0A1B0GV22 79 aa4.07□□□□□ -1.76
SP140-202ENST00000373645 ZCCHC13Q8WW36 166 aaKnown RBP4.07□□□□□ -1.76
SP140-202ENST00000373645 UQCRQO14949 82 aa4.05□□□□□ -1.76
SP140-202ENST00000373645 M0R2T5 61 aa4.04□□□□□ -1.76
SP140-202ENST00000373645 ATOX1O00244 68 aa4.04□□□□□ -1.76
SP140-202ENST00000373645 Q5W150 140 aa4.04□□□□□ -1.76
SP140-202ENST00000373645 SMIM20Q8N5G0 67 aa4.04□□□□□ -1.76
SP140-202ENST00000373645 OCR1Q9BZK8 76 aa4.04□□□□□ -1.76
SP140-202ENST00000373645 FLGP20930 4061 aaPredicted RBP4.04□□□□□ -1.76
SP140-202ENST00000373645 TRAV22A0A0B4J277 110 aa4.02□□□□□ -1.77
SP140-202ENST00000373645 TRAV7A0A075B6U4 112 aa4.01□□□□□ -1.77
SP140-202ENST00000373645 C5orf47Q569G3 176 aa4.01□□□□□ -1.77
SP140-202ENST00000373645 H0Y9P7 68 aa3.99□□□□□ -1.77
SP140-202ENST00000373645 COX6B2Q6YFQ2 88 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms