RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 CASC2Q6XLA1 102 aa9.03□□□□□ -0.96
HDAC8-209ENST00000373589 SPINK1P00995 79 aa9.01□□□□□ -0.97
HDAC8-209ENST00000373589 C4orf48Q5BLP8 95 aa9.01□□□□□ -0.97
HDAC8-209ENST00000373589 LIMD2Q9BT23 127 aa9.01□□□□□ -0.97
HDAC8-209ENST00000373589 KIAA1109Q2LD37 5005 aa9.01□□□□□ -0.97
HDAC8-209ENST00000373589 C1orf195Q5TG92 126 aa9□□□□□ -0.97
HDAC8-209ENST00000373589 C20orf197Q8N268 126 aa9□□□□□ -0.97
HDAC8-209ENST00000373589 CYSTM1Q9H1C7 97 aa9□□□□□ -0.97
HDAC8-209ENST00000373589 C8orf17Q9NRJ1 99 aa9□□□□□ -0.97
HDAC8-209ENST00000373589 IGHV6-1A0A0B4J1U7 121 aa9□□□□□ -0.97
HDAC8-209ENST00000373589 hDV103S1A0JD37 113 aa8.99□□□□□ -0.97
HDAC8-209ENST00000373589 LINC00304Q8N9R0 145 aa8.98□□□□□ -0.97
HDAC8-209ENST00000373589 Q5VSD8 79 aa8.97□□□□□ -0.97
HDAC8-209ENST00000373589 RPS29P62273 56 aaKnown RBP8.97□□□□□ -0.97
HDAC8-209ENST00000373589 KLKP1Q107X0 134 aa8.97□□□□□ -0.97
HDAC8-209ENST00000373589 SPAG11AQ6PDA7 123 aa8.97□□□□□ -0.97
HDAC8-209ENST00000373589 NOTCH2NLQ7Z3S9 236 aa8.96□□□□□ -0.98
HDAC8-209ENST00000373589 TMEM254Q8TBM7 123 aa8.94□□□□□ -0.98
HDAC8-209ENST00000373589 KRTAP17-1Q9BYP8 105 aa8.93□□□□□ -0.98
HDAC8-209ENST00000373589 SNURFQ9Y675 71 aa8.92□□□□□ -0.98
HDAC8-209ENST00000373589 TNXBP22105 4242 aa8.92□□□□□ -0.98
HDAC8-209ENST00000373589 A0A0U1RQV1 116 aa8.91□□□□□ -0.98
HDAC8-209ENST00000373589 LRP1Q07954 4544 aaKnown RBP8.91□□□□□ -0.98
HDAC8-209ENST00000373589 C5orf47Q569G3 176 aa8.91□□□□□ -0.98
HDAC8-209ENST00000373589 C8orf87E5RJ46 101 aa8.9□□□□□ -0.98
HDAC8-209ENST00000373589 FAT3Q8TDW7 4589 aa8.89□□□□□ -0.99
HDAC8-209ENST00000373589 MRPL34Q9BQ48 92 aaKnown RBP8.89□□□□□ -0.99
HDAC8-209ENST00000373589 H7BZZ5 65 aa8.86□□□□□ -0.99
HDAC8-209ENST00000373589 TP53AIP1Q9HCN2 124 aa8.85□□□□□ -0.99
HDAC8-209ENST00000373589 LINC00313P59037 77 aa8.85□□□□□ -0.99
HDAC8-209ENST00000373589 Q8N1X5 172 aa8.85□□□□□ -0.99
HDAC8-209ENST00000373589 ZCCHC13Q8WW36 166 aaKnown RBP8.85□□□□□ -0.99
HDAC8-209ENST00000373589 NDUFC1O43677 76 aa8.84□□□□□ -0.99
HDAC8-209ENST00000373589 TMEM258P61165 79 aa8.84□□□□□ -0.99
HDAC8-209ENST00000373589 KRTAP10-8P60410 259 aa8.83□□□□□ -1
HDAC8-209ENST00000373589 SVIPQ8NHG7 77 aa8.83□□□□□ -1
HDAC8-209ENST00000373589 MP68P56378 58 aa8.82□□□□□ -1
HDAC8-209ENST00000373589 H0Y9P7 68 aa8.81□□□□□ -1
HDAC8-209ENST00000373589 NDUFS5O43920 106 aa8.8□□□□□ -1
HDAC8-209ENST00000373589 TRAV22A0A0B4J277 110 aa8.8□□□□□ -1
HDAC8-209ENST00000373589 KRTAP16-1A8MUX0 517 aa8.8□□□□□ -1
HDAC8-209ENST00000373589 H3BPC8 53 aa8.79□□□□□ -1
HDAC8-209ENST00000373589 LCE2AQ5TA79 106 aaPredicted RBP8.78□□□□□ -1
HDAC8-209ENST00000373589 Q8N9P0 234 aaPredicted RBP8.78□□□□□ -1
HDAC8-209ENST00000373589 MYCBP2O75592 4640 aa8.77□□□□□ -1.01
HDAC8-209ENST00000373589 LINC00208Q96KT6 92 aa8.77□□□□□ -1.01
HDAC8-209ENST00000373589 FLG2Q5D862 2391 aaPredicted RBP8.76□□□□□ -1.01
HDAC8-209ENST00000373589 C1orf64Q8NEQ6 169 aa8.73□□□□□ -1.01
HDAC8-209ENST00000373589 FAM236DA0A1B0GTK5 79 aa8.72□□□□□ -1.01
HDAC8-209ENST00000373589 FAM236CP0DP71 79 aa8.72□□□□□ -1.01
HDAC8-209ENST00000373589 KRTAP13-3Q3SY46 172 aa8.72□□□□□ -1.01
HDAC8-209ENST00000373589 Q5W150 140 aa8.71□□□□□ -1.02
HDAC8-209ENST00000373589 RETNLBQ9BQ08 111 aa8.69□□□□□ -1.02
HDAC8-209ENST00000373589 MT1HL1P0DM35 61 aa8.68□□□□□ -1.02
HDAC8-209ENST00000373589 ATP5EP56381 51 aaPredicted RBP8.66□□□□□ -1.02
HDAC8-209ENST00000373589 BIRC6Q9NR09 4857 aa8.65□□□□□ -1.02
HDAC8-209ENST00000373589 KRTAP4-5Q9BYR2 181 aa8.63□□□□□ -1.03
HDAC8-209ENST00000373589 LOC101927531A0A1B0GV80 90 aa8.62□□□□□ -1.03
HDAC8-209ENST00000373589 RPS28P62857 69 aaKnown RBP8.62□□□□□ -1.03
HDAC8-209ENST00000373589 DMBT1Q9UGM3 2413 aaPredicted RBP8.61□□□□□ -1.03
HDAC8-209ENST00000373589 C9orf92A6NGG3 77 aa8.6□□□□□ -1.03
HDAC8-209ENST00000373589 HERC2O95714 4834 aa8.6□□□□□ -1.03
HDAC8-209ENST00000373589 OXTP01178 125 aa8.6□□□□□ -1.03
HDAC8-209ENST00000373589 ABCA13Q86UQ4 5058 aa8.59□□□□□ -1.03
HDAC8-209ENST00000373589 SPANXA2-OT1Q8N9U9 137 aa8.59□□□□□ -1.03
HDAC8-209ENST00000373589 FP248Q71RG6 208 aaPredicted RBP8.58□□□□□ -1.04
HDAC8-209ENST00000373589 C20orf166-AS1Q96NR2 134 aa8.58□□□□□ -1.04
HDAC8-209ENST00000373589 A8MUU9 505 aa8.57□□□□□ -1.04
HDAC8-209ENST00000373589 PCOTHQ58A44 107 aa8.57□□□□□ -1.04
HDAC8-209ENST00000373589 CYP4F30PQ9H0H9 118 aa8.57□□□□□ -1.04
HDAC8-209ENST00000373589 SERP1Q9Y6X1 66 aa8.57□□□□□ -1.04
HDAC8-209ENST00000373589 IGKV2-30P06310 120 aa8.54□□□□□ -1.04
HDAC8-209ENST00000373589 IGLV7-46A0A075B6I9 117 aa8.53□□□□□ -1.04
HDAC8-209ENST00000373589 PRR4Q16378 134 aa8.52□□□□□ -1.05
HDAC8-209ENST00000373589 KRTAP4-8Q9BYQ9 185 aa8.5□□□□□ -1.05
HDAC8-209ENST00000373589 Q75L30 129 aa8.48□□□□□ -1.05
HDAC8-209ENST00000373589 IGKV2D-30A0A075B6S6 120 aa8.44□□□□□ -1.06
HDAC8-209ENST00000373589 HRES1P13985 223 aa8.43□□□□□ -1.06
HDAC8-209ENST00000373589 C7orf65Q6ZTY9 151 aa8.4□□□□□ -1.06
HDAC8-209ENST00000373589 XP32Q5T750 250 aa8.39□□□□□ -1.07
HDAC8-209ENST00000373589 RPL37P61927 97 aaKnown RBP8.36□□□□□ -1.07
HDAC8-209ENST00000373589 SMIM26A0A096LP01 95 aa8.35□□□□□ -1.07
HDAC8-209ENST00000373589 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.34□□□□□ -1.07
HDAC8-209ENST00000373589 TPRXLQ17RH7 258 aa8.33□□□□□ -1.08
HDAC8-209ENST00000373589 COA5Q86WW8 74 aa8.33□□□□□ -1.08
HDAC8-209ENST00000373589 DMAC1Q96GE9 116 aa8.33□□□□□ -1.08
HDAC8-209ENST00000373589 ATP11AUNQ6ZP68 121 aa8.32□□□□□ -1.08
HDAC8-209ENST00000373589 KRTAP9-2Q9BYQ4 174 aa8.32□□□□□ -1.08
HDAC8-209ENST00000373589 J3QL48 77 aa8.3□□□□□ -1.08
HDAC8-209ENST00000373589 SPINK7P58062 85 aa8.3□□□□□ -1.08
HDAC8-209ENST00000373589 KRTAP9-6A0A140TA67 174 aa8.28□□□□□ -1.08
HDAC8-209ENST00000373589 ACYP2P14621 99 aa8.28□□□□□ -1.08
HDAC8-209ENST00000373589 LRP2P98164 4655 aa8.27□□□□□ -1.09
HDAC8-209ENST00000373589 LPAP08519 4548 aa8.26□□□□□ -1.09
HDAC8-209ENST00000373589 PCLOQ9Y6V0 5065 aa8.24□□□□□ -1.09
HDAC8-209ENST00000373589 C4orf26Q17RF5 130 aa8.23□□□□□ -1.09
HDAC8-209ENST00000373589 A8MUN3 132 aa8.19□□□□□ -1.1
HDAC8-209ENST00000373589 MPLKIPQ8TAP9 179 aa8.19□□□□□ -1.1
HDAC8-209ENST00000373589 Q1T7F1 81 aa8.18□□□□□ -1.1
HDAC8-209ENST00000373589 KRTAP3-1Q9BYR8 98 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms