RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 VWFP04275 2813 aa6.36□□□□□ -1.39
TRERF1-203ENST00000372917 Q5W150 140 aa6.35□□□□□ -1.39
TRERF1-203ENST00000372917 TENM4Q6N022 2769 aa6.35□□□□□ -1.39
TRERF1-203ENST00000372917 KRTAP7-1Q8IUC3 87 aa6.34□□□□□ -1.39
TRERF1-203ENST00000372917 SPINK1P00995 79 aa6.34□□□□□ -1.39
TRERF1-203ENST00000372917 A0A1B0GVX0 72 aa6.33□□□□□ -1.4
TRERF1-203ENST00000372917 PDZD2O15018 2839 aa6.33□□□□□ -1.4
TRERF1-203ENST00000372917 NOTCH2NLQ7Z3S9 236 aa6.32□□□□□ -1.4
TRERF1-203ENST00000372917 KRTAP24-1Q3LI83 254 aa6.31□□□□□ -1.4
TRERF1-203ENST00000372917 TENM2Q9NT68 2774 aa6.3□□□□□ -1.4
TRERF1-203ENST00000372917 SRRM2Q9UQ35 2752 aaKnown RBP6.29□□□□□ -1.4
TRERF1-203ENST00000372917 CIRBP-AS1Q8TBR5 109 aa6.29□□□□□ -1.4
TRERF1-203ENST00000372917 TENM1Q9UKZ4 2725 aa6.28□□□□□ -1.4
TRERF1-203ENST00000372917 STAB2Q8WWQ8 2551 aa6.27□□□□□ -1.4
TRERF1-203ENST00000372917 Q96NJ1 140 aa6.26□□□□□ -1.41
TRERF1-203ENST00000372917 LUZP6Q538Z0 58 aa6.26□□□□□ -1.41
TRERF1-203ENST00000372917 PKD1L1Q8TDX9 2849 aa6.25□□□□□ -1.41
TRERF1-203ENST00000372917 NUPR2A6NF83 97 aa6.25□□□□□ -1.41
TRERF1-203ENST00000372917 TENM3Q9P273 2699 aa6.25□□□□□ -1.41
TRERF1-203ENST00000372917 ANAPC11Q9NYG5 84 aa6.24□□□□□ -1.41
TRERF1-203ENST00000372917 ALMS1Q8TCU4 4167 aa6.23□□□□□ -1.41
TRERF1-203ENST00000372917 FBN1P35555 2871 aaKnown RBP6.22□□□□□ -1.41
TRERF1-203ENST00000372917 K7ERS5 55 aa6.21□□□□□ -1.41
TRERF1-203ENST00000372917 H0YAA0 97 aa6.2□□□□□ -1.42
TRERF1-203ENST00000372917 KRTAP11-1Q8IUC1 163 aa6.2□□□□□ -1.42
TRERF1-203ENST00000372917 A0A087WTM6 91 aa6.2□□□□□ -1.42
TRERF1-203ENST00000372917 PSORS1C2Q9UIG4 136 aa6.2□□□□□ -1.42
TRERF1-203ENST00000372917 CSMD3Q7Z407 3707 aa6.18□□□□□ -1.42
TRERF1-203ENST00000372917 IGKV2D-30A0A075B6S6 120 aa6.17□□□□□ -1.42
TRERF1-203ENST00000372917 IGKV2-30P06310 120 aa6.17□□□□□ -1.42
TRERF1-203ENST00000372917 SPRR1BP22528 89 aa6.17□□□□□ -1.42
TRERF1-203ENST00000372917 LY6G6CO95867 125 aa6.17□□□□□ -1.42
TRERF1-203ENST00000372917 Q6ZSA8 131 aa6.17□□□□□ -1.42
TRERF1-203ENST00000372917 KRTAP13-3Q3SY46 172 aa6.16□□□□□ -1.42
TRERF1-203ENST00000372917 PANO1I0J062 215 aa6.14□□□□□ -1.43
TRERF1-203ENST00000372917 NBDYA0A0U1RRE5 68 aa6.14□□□□□ -1.43
TRERF1-203ENST00000372917 A0A1B0GU33 70 aa6.12□□□□□ -1.43
TRERF1-203ENST00000372917 KRTAP1-5Q9BYS1 174 aa6.12□□□□□ -1.43
TRERF1-203ENST00000372917 FAM229AH3BQW9 127 aa6.11□□□□□ -1.43
TRERF1-203ENST00000372917 KRTAP15-1Q3LI76 137 aa6.1□□□□□ -1.43
TRERF1-203ENST00000372917 DMBT1Q9UGM3 2413 aaPredicted RBP6.09□□□□□ -1.43
TRERF1-203ENST00000372917 SPACA4Q8TDM5 124 aa6.08□□□□□ -1.44
TRERF1-203ENST00000372917 Q8N1X5 172 aa6.07□□□□□ -1.44
TRERF1-203ENST00000372917 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.06□□□□□ -1.44
TRERF1-203ENST00000372917 C10orf95Q9H7T3 257 aa6.06□□□□□ -1.44
TRERF1-203ENST00000372917 TPRXLQ17RH7 258 aa6.04□□□□□ -1.44
TRERF1-203ENST00000372917 TYMSOSQ8TAI1 123 aa6.04□□□□□ -1.44
TRERF1-203ENST00000372917 TRRAPQ9Y4A5 3859 aa6.04□□□□□ -1.44
TRERF1-203ENST00000372917 APLNQ9ULZ1 77 aa6.03□□□□□ -1.44
TRERF1-203ENST00000372917 ZNF469Q96JG9 3925 aaPredicted RBP6.02□□□□□ -1.45
TRERF1-203ENST00000372917 H1FX-AS1Q4G0G2 97 aa6.02□□□□□ -1.45
TRERF1-203ENST00000372917 COL7A1Q02388 2944 aa6□□□□□ -1.45
TRERF1-203ENST00000372917 ANK3Q12955 4377 aaKnown RBP5.99□□□□□ -1.45
TRERF1-203ENST00000372917 SEC61BP60468 96 aaKnown RBP5.96□□□□□ -1.45
TRERF1-203ENST00000372917 KRTAP13-1Q8IUC0 172 aa5.95□□□□□ -1.46
TRERF1-203ENST00000372917 WWC2-AS2Q96NR7 200 aa5.93□□□□□ -1.46
TRERF1-203ENST00000372917 A0A0D9SG42 100 aa5.91□□□□□ -1.46
TRERF1-203ENST00000372917 TGP01266 2768 aa5.88□□□□□ -1.47
TRERF1-203ENST00000372917 KRTAP21-3Q3LHN1 58 aa5.87□□□□□ -1.47
TRERF1-203ENST00000372917 RPL37P61927 97 aaKnown RBP5.86□□□□□ -1.47
TRERF1-203ENST00000372917 COX6B2Q6YFQ2 88 aa5.85□□□□□ -1.47
TRERF1-203ENST00000372917 MEGF8Q7Z7M0 2845 aa5.85□□□□□ -1.47
TRERF1-203ENST00000372917 C9orf92A6NGG3 77 aa5.82□□□□□ -1.48
TRERF1-203ENST00000372917 SMR3BP02814 79 aaPredicted RBP5.79□□□□□ -1.48
TRERF1-203ENST00000372917 Q6ZRN7 208 aaPredicted RBP5.78□□□□□ -1.48
TRERF1-203ENST00000372917 FBN3Q75N90 2809 aa5.73□□□□□ -1.49
TRERF1-203ENST00000372917 KRTAP10-2P60368 255 aa5.72□□□□□ -1.49
TRERF1-203ENST00000372917 KRTAP10-1P60331 282 aa5.65□□□□□ -1.51
TRERF1-203ENST00000372917 DNAH10Q8IVF4 4471 aa5.64□□□□□ -1.51
TRERF1-203ENST00000372917 KRTAP13-4Q3LI77 160 aa5.63□□□□□ -1.51
TRERF1-203ENST00000372917 S4R3F8 94 aa5.62□□□□□ -1.51
TRERF1-203ENST00000372917 KRTAP13-2Q52LG2 175 aa5.62□□□□□ -1.51
TRERF1-203ENST00000372917 PLAC4Q8WY50 150 aa5.6□□□□□ -1.51
TRERF1-203ENST00000372917 KRTAP3-1Q9BYR8 98 aa5.6□□□□□ -1.51
TRERF1-203ENST00000372917 J3QL48 77 aa5.6□□□□□ -1.51
TRERF1-203ENST00000372917 DNAH1Q9P2D7 4330 aa5.57□□□□□ -1.52
TRERF1-203ENST00000372917 LYSTQ99698 3801 aa5.55□□□□□ -1.52
TRERF1-203ENST00000372917 HUWE1Q7Z6Z7 4374 aaKnown RBP5.54□□□□□ -1.52
TRERF1-203ENST00000372917 KRTAP12-2P59991 146 aa5.54□□□□□ -1.52
TRERF1-203ENST00000372917 CAMK2N1Q7Z7J9 78 aa5.51□□□□□ -1.53
TRERF1-203ENST00000372917 KRTAP10-6P60371 365 aaPredicted RBP5.5□□□□□ -1.53
TRERF1-203ENST00000372917 FRAS1Q86XX4 4008 aa5.5□□□□□ -1.53
TRERF1-203ENST00000372917 XP32Q5T750 250 aa5.48□□□□□ -1.53
TRERF1-203ENST00000372917 ANK2Q01484 3957 aa5.45□□□□□ -1.54
TRERF1-203ENST00000372917 DNAH8Q96JB1 4490 aa5.45□□□□□ -1.54
TRERF1-203ENST00000372917 KRTAP3-2Q9BYR7 98 aa5.45□□□□□ -1.54
TRERF1-203ENST00000372917 KRTAP1-4P0C5Y4 121 aa5.44□□□□□ -1.54
TRERF1-203ENST00000372917 DNAH9Q9NYC9 4486 aa5.43□□□□□ -1.54
TRERF1-203ENST00000372917 DNAH17Q9UFH2 4485 aa5.42□□□□□ -1.54
TRERF1-203ENST00000372917 DNAH3Q8TD57 4116 aa5.4□□□□□ -1.55
TRERF1-203ENST00000372917 KRTAP12-1P59990 96 aa5.4□□□□□ -1.55
TRERF1-203ENST00000372917 RPS29P62273 56 aaKnown RBP5.4□□□□□ -1.55
TRERF1-203ENST00000372917 KRTAP10-8P60410 259 aa5.38□□□□□ -1.55
TRERF1-203ENST00000372917 CMYA5Q8N3K9 4069 aa5.35□□□□□ -1.55
TRERF1-203ENST00000372917 PLECQ15149 4684 aaKnown RBP5.31□□□□□ -1.56
TRERF1-203ENST00000372917 DNHD1Q96M86 4753 aa5.28□□□□□ -1.56
TRERF1-203ENST00000372917 KRTAP3-3Q9BYR6 98 aa5.28□□□□□ -1.56
TRERF1-203ENST00000372917 PRO2289Q9P1D8 64 aa5.26□□□□□ -1.57
TRERF1-203ENST00000372917 VPS13DQ5THJ4 4388 aa5.24□□□□□ -1.57
TRERF1-203ENST00000372917 DYNC2H1Q8NCM8 4307 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms