RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 CDC42SE1Q9NRR8 79 aa8.87□□□□□ -0.99
COL9A2-202ENST00000372748 LINC01558Q9Y6Z2 57 aa8.87□□□□□ -0.99
COL9A2-202ENST00000372748 STARD9Q9P2P6 4700 aa8.87□□□□□ -0.99
COL9A2-202ENST00000372748 SPINK7P58062 85 aa8.87□□□□□ -0.99
COL9A2-202ENST00000372748 CDK2AP2O75956 126 aa8.86□□□□□ -0.99
COL9A2-202ENST00000372748 A6NN06 94 aa8.85□□□□□ -0.99
COL9A2-202ENST00000372748 MRPL34Q9BQ48 92 aaKnown RBP8.85□□□□□ -0.99
COL9A2-202ENST00000372748 NUPR2A6NF83 97 aa8.84□□□□□ -0.99
COL9A2-202ENST00000372748 PLAC8Q9NZF1 115 aa8.83□□□□□ -1
COL9A2-202ENST00000372748 SPACA4Q8TDM5 124 aa8.83□□□□□ -1
COL9A2-202ENST00000372748 RBM12B-AS1Q9P1G2 102 aa8.83□□□□□ -1
COL9A2-202ENST00000372748 SPINK6Q6UWN8 80 aa8.82□□□□□ -1
COL9A2-202ENST00000372748 PRR26Q8N8Z3 221 aa8.82□□□□□ -1
COL9A2-202ENST00000372748 WWC2-AS2Q96NR7 200 aa8.81□□□□□ -1
COL9A2-202ENST00000372748 FRAS1Q86XX4 4008 aa8.81□□□□□ -1
COL9A2-202ENST00000372748 KMT2AQ03164 3969 aa8.81□□□□□ -1
COL9A2-202ENST00000372748 A0A087WTM6 91 aa8.8□□□□□ -1
COL9A2-202ENST00000372748 HECTD4Q9Y4D8 3996 aa8.79□□□□□ -1
COL9A2-202ENST00000372748 LINC00483Q53H64 154 aa8.79□□□□□ -1
COL9A2-202ENST00000372748 Q5W150 140 aa8.79□□□□□ -1
COL9A2-202ENST00000372748 VPS13DQ5THJ4 4388 aa8.77□□□□□ -1
COL9A2-202ENST00000372748 PSORS1C2Q9UIG4 136 aa8.77□□□□□ -1.01
COL9A2-202ENST00000372748 RTL8CO15255 209 aa8.76□□□□□ -1.01
COL9A2-202ENST00000372748 DNAH2Q9P225 4427 aa8.74□□□□□ -1.01
COL9A2-202ENST00000372748 ZNF706Q9Y5V0 76 aaPredicted RBP8.73□□□□□ -1.01
COL9A2-202ENST00000372748 DNAH8Q96JB1 4490 aa8.72□□□□□ -1.01
COL9A2-202ENST00000372748 IGLV5-52A0A0A0MRZ9 124 aa8.71□□□□□ -1.02
COL9A2-202ENST00000372748 C7orf65Q6ZTY9 151 aa8.71□□□□□ -1.02
COL9A2-202ENST00000372748 CIRBP-AS1Q8TBR5 109 aa8.69□□□□□ -1.02
COL9A2-202ENST00000372748 ZNF861PO60384 105 aa8.68□□□□□ -1.02
COL9A2-202ENST00000372748 RETNLBQ9BQ08 111 aa8.68□□□□□ -1.02
COL9A2-202ENST00000372748 KRTAP13-3Q3SY46 172 aa8.67□□□□□ -1.02
COL9A2-202ENST00000372748 DNAH17Q9UFH2 4485 aa8.67□□□□□ -1.02
COL9A2-202ENST00000372748 ACYP2P14621 99 aa8.65□□□□□ -1.03
COL9A2-202ENST00000372748 KRTAP21-3Q3LHN1 58 aa8.64□□□□□ -1.03
COL9A2-202ENST00000372748 C1orf134Q5TEV5 83 aa8.6□□□□□ -1.03
COL9A2-202ENST00000372748 PRAC1Q96KF2 57 aa8.6□□□□□ -1.03
COL9A2-202ENST00000372748 LY6G6CO95867 125 aa8.59□□□□□ -1.03
COL9A2-202ENST00000372748 DNAH6Q9C0G6 4158 aa8.59□□□□□ -1.03
COL9A2-202ENST00000372748 LINC00313P59037 77 aa8.58□□□□□ -1.04
COL9A2-202ENST00000372748 IGLV7-43P04211 117 aa8.57□□□□□ -1.04
COL9A2-202ENST00000372748 DMAC1Q96GE9 116 aa8.57□□□□□ -1.04
COL9A2-202ENST00000372748 ADM2Q7Z4H4 148 aa8.57□□□□□ -1.04
COL9A2-202ENST00000372748 A0A1B0GU69 56 aa8.55□□□□□ -1.04
COL9A2-202ENST00000372748 H3BS24 57 aa8.55□□□□□ -1.04
COL9A2-202ENST00000372748 ALMS1Q8TCU4 4167 aa8.54□□□□□ -1.04
COL9A2-202ENST00000372748 C8orf87E5RJ46 101 aa8.54□□□□□ -1.04
COL9A2-202ENST00000372748 DNAH11Q96DT5 4516 aa8.52□□□□□ -1.05
COL9A2-202ENST00000372748 KRTAP10-2P60368 255 aa8.52□□□□□ -1.05
COL9A2-202ENST00000372748 HYDINQ4G0P3 5121 aa8.51□□□□□ -1.05
COL9A2-202ENST00000372748 FAM229AH3BQW9 127 aa8.5□□□□□ -1.05
COL9A2-202ENST00000372748 DNAH5Q8TE73 4624 aa8.5□□□□□ -1.05
COL9A2-202ENST00000372748 IGKV2-30P06310 120 aa8.47□□□□□ -1.05
COL9A2-202ENST00000372748 IGKV2D-30A0A075B6S6 120 aa8.46□□□□□ -1.06
COL9A2-202ENST00000372748 SSBP3-AS1Q7Z2R9 100 aa8.46□□□□□ -1.06
COL9A2-202ENST00000372748 SPATA8Q6RVD6 105 aa8.44□□□□□ -1.06
COL9A2-202ENST00000372748 MIR22HGQ0VDD5 57 aa8.43□□□□□ -1.06
COL9A2-202ENST00000372748 PLA2G1BP04054 148 aaKnown RBP8.41□□□□□ -1.06
COL9A2-202ENST00000372748 LRP1BQ9NZR2 4599 aa8.41□□□□□ -1.06
COL9A2-202ENST00000372748 UQCR11O14957 56 aa8.41□□□□□ -1.06
COL9A2-202ENST00000372748 KRTAP13-2Q52LG2 175 aa8.4□□□□□ -1.06
COL9A2-202ENST00000372748 KRTAP10-1P60331 282 aa8.39□□□□□ -1.07
COL9A2-202ENST00000372748 KRTAP16-1A8MUX0 517 aa8.39□□□□□ -1.07
COL9A2-202ENST00000372748 SPINK1P00995 79 aa8.36□□□□□ -1.07
COL9A2-202ENST00000372748 KMT2CQ8NEZ4 4911 aaKnown RBP8.35□□□□□ -1.07
COL9A2-202ENST00000372748 PKD1P98161 4303 aa8.34□□□□□ -1.07
COL9A2-202ENST00000372748 SACSQ9NZJ4 4579 aa8.33□□□□□ -1.08
COL9A2-202ENST00000372748 LINC01554Q52M75 96 aa8.32□□□□□ -1.08
COL9A2-202ENST00000372748 VPS13BQ7Z7G8 4022 aa8.31□□□□□ -1.08
COL9A2-202ENST00000372748 FAT2Q9NYQ8 4349 aa8.3□□□□□ -1.08
COL9A2-202ENST00000372748 Q6ZSA8 131 aa8.3□□□□□ -1.08
COL9A2-202ENST00000372748 Q8N1X5 172 aa8.29□□□□□ -1.08
COL9A2-202ENST00000372748 KRTAP1-4P0C5Y4 121 aa8.27□□□□□ -1.09
COL9A2-202ENST00000372748 CSAG1Q6PB30 78 aa8.27□□□□□ -1.09
COL9A2-202ENST00000372748 PKHD1P08F94 4074 aa8.25□□□□□ -1.09
COL9A2-202ENST00000372748 TYMSOSQ8TAI1 123 aa8.2□□□□□ -1.1
COL9A2-202ENST00000372748 RYR2Q92736 4967 aa8.12□□□□□ -1.11
COL9A2-202ENST00000372748 SMR3BP02814 79 aaPredicted RBP8.12□□□□□ -1.11
COL9A2-202ENST00000372748 H0YAA0 97 aa8.11□□□□□ -1.11
COL9A2-202ENST00000372748 RYR3Q15413 4870 aa8.11□□□□□ -1.11
COL9A2-202ENST00000372748 LINC00304Q8N9R0 145 aa8.06□□□□□ -1.12
COL9A2-202ENST00000372748 C9orf92A6NGG3 77 aa8.05□□□□□ -1.12
COL9A2-202ENST00000372748 FLG2Q5D862 2391 aaPredicted RBP8.05□□□□□ -1.12
COL9A2-202ENST00000372748 A8MUU9 505 aa8.04□□□□□ -1.12
COL9A2-202ENST00000372748 DYNC1H1Q14204 4646 aaKnown RBP8.02□□□□□ -1.13
COL9A2-202ENST00000372748 A0A1B0GU33 70 aa8.01□□□□□ -1.13
COL9A2-202ENST00000372748 FAT1Q14517 4588 aa8.01□□□□□ -1.13
COL9A2-202ENST00000372748 KRTAP3-1Q9BYR8 98 aa8□□□□□ -1.13
COL9A2-202ENST00000372748 H1FX-AS1Q4G0G2 97 aa7.95□□□□□ -1.14
COL9A2-202ENST00000372748 CRIPTQ9P021 101 aa7.95□□□□□ -1.14
COL9A2-202ENST00000372748 KRTAP25-1Q3LHN0 102 aa7.94□□□□□ -1.14
COL9A2-202ENST00000372748 RPS29P62273 56 aaKnown RBP7.9□□□□□ -1.14
COL9A2-202ENST00000372748 C20orf166-AS1Q96NR2 134 aa7.89□□□□□ -1.15
COL9A2-202ENST00000372748 APOBP04114 4563 aaKnown RBP7.88□□□□□ -1.15
COL9A2-202ENST00000372748 A0A1B0GVY2 172 aa7.87□□□□□ -1.15
COL9A2-202ENST00000372748 J3QL48 77 aa7.86□□□□□ -1.15
COL9A2-202ENST00000372748 KRTAP10-4P60372 401 aaPredicted RBP7.85□□□□□ -1.15
COL9A2-202ENST00000372748 EPPK1P58107 5090 aaKnown RBP7.84□□□□□ -1.15
COL9A2-202ENST00000372748 PKHD1L1Q86WI1 4243 aa7.84□□□□□ -1.15
COL9A2-202ENST00000372748 COX6B2Q6YFQ2 88 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms