RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 DNAH8Q96JB1 4490 aa7.02□□□□□ -1.29
PDE6C-201ENST00000371447 H0Y9P7 68 aa7.02□□□□□ -1.29
PDE6C-201ENST00000371447 A0A087X002 238 aa7.01□□□□□ -1.29
PDE6C-201ENST00000371447 PCOTHQ58A44 107 aa7.01□□□□□ -1.29
PDE6C-201ENST00000371447 NOTCH2NLQ7Z3S9 236 aa7.01□□□□□ -1.29
PDE6C-201ENST00000371447 hDV103S1A0JD37 113 aa7.01□□□□□ -1.29
PDE6C-201ENST00000371447 A6NED7 52 aa7□□□□□ -1.29
PDE6C-201ENST00000371447 RETNLBQ9BQ08 111 aa6.99□□□□□ -1.29
PDE6C-201ENST00000371447 KRTAP29-1A8MX34 341 aaPredicted RBP6.98□□□□□ -1.29
PDE6C-201ENST00000371447 LCA10Q71F78 164 aa6.98□□□□□ -1.29
PDE6C-201ENST00000371447 MMP24-AS1A0A0U1RRL7 71 aa6.97□□□□□ -1.29
PDE6C-201ENST00000371447 C1orf64Q8NEQ6 169 aa6.97□□□□□ -1.29
PDE6C-201ENST00000371447 SMR3BP02814 79 aaPredicted RBP6.97□□□□□ -1.29
PDE6C-201ENST00000371447 Q96NJ1 140 aa6.96□□□□□ -1.29
PDE6C-201ENST00000371447 LRP1BQ9NZR2 4599 aa6.96□□□□□ -1.3
PDE6C-201ENST00000371447 LINC00483Q53H64 154 aa6.96□□□□□ -1.3
PDE6C-201ENST00000371447 PRAC1Q96KF2 57 aa6.96□□□□□ -1.3
PDE6C-201ENST00000371447 PRR15LQ9BU68 103 aa6.96□□□□□ -1.3
PDE6C-201ENST00000371447 C7orf65Q6ZTY9 151 aa6.95□□□□□ -1.3
PDE6C-201ENST00000371447 Q1T7F1 81 aa6.94□□□□□ -1.3
PDE6C-201ENST00000371447 C8orf17Q9NRJ1 99 aa6.94□□□□□ -1.3
PDE6C-201ENST00000371447 DNAH5Q8TE73 4624 aa6.93□□□□□ -1.3
PDE6C-201ENST00000371447 A0A1B0GVX0 72 aa6.92□□□□□ -1.3
PDE6C-201ENST00000371447 ZCCHC13Q8WW36 166 aaKnown RBP6.91□□□□□ -1.3
PDE6C-201ENST00000371447 ATP11AUNQ6ZP68 121 aa6.9□□□□□ -1.31
PDE6C-201ENST00000371447 PKHD1P08F94 4074 aa6.89□□□□□ -1.31
PDE6C-201ENST00000371447 LCE6AA0A183 80 aa6.88□□□□□ -1.31
PDE6C-201ENST00000371447 Q5VV11 94 aa6.88□□□□□ -1.31
PDE6C-201ENST00000371447 PLA2G1BP04054 148 aaKnown RBP6.87□□□□□ -1.31
PDE6C-201ENST00000371447 LINC01554Q52M75 96 aa6.87□□□□□ -1.31
PDE6C-201ENST00000371447 KRTAP13-2Q52LG2 175 aa6.86□□□□□ -1.31
PDE6C-201ENST00000371447 MRPL34Q9BQ48 92 aaKnown RBP6.86□□□□□ -1.31
PDE6C-201ENST00000371447 LINC00313P59037 77 aa6.85□□□□□ -1.31
PDE6C-201ENST00000371447 A6NN06 94 aa6.84□□□□□ -1.31
PDE6C-201ENST00000371447 VPS13BQ7Z7G8 4022 aa6.83□□□□□ -1.32
PDE6C-201ENST00000371447 ALMS1Q8TCU4 4167 aa6.83□□□□□ -1.32
PDE6C-201ENST00000371447 Q5W150 140 aa6.82□□□□□ -1.32
PDE6C-201ENST00000371447 SSBP3-AS1Q7Z2R9 100 aa6.81□□□□□ -1.32
PDE6C-201ENST00000371447 TYMSOSQ8TAI1 123 aa6.8□□□□□ -1.32
PDE6C-201ENST00000371447 FAT2Q9NYQ8 4349 aa6.8□□□□□ -1.32
PDE6C-201ENST00000371447 ADM2Q7Z4H4 148 aa6.8□□□□□ -1.32
PDE6C-201ENST00000371447 A0A0A0MQY5 61 aa6.79□□□□□ -1.32
PDE6C-201ENST00000371447 Q6ZSA8 131 aa6.79□□□□□ -1.32
PDE6C-201ENST00000371447 FAT1Q14517 4588 aa6.79□□□□□ -1.32
PDE6C-201ENST00000371447 PKD1P98161 4303 aa6.77□□□□□ -1.33
PDE6C-201ENST00000371447 TP53AIP1Q9HCN2 124 aa6.77□□□□□ -1.33
PDE6C-201ENST00000371447 FLG2Q5D862 2391 aaPredicted RBP6.77□□□□□ -1.33
PDE6C-201ENST00000371447 KRTAP1-4P0C5Y4 121 aa6.76□□□□□ -1.33
PDE6C-201ENST00000371447 Q8N9P0 234 aaPredicted RBP6.76□□□□□ -1.33
PDE6C-201ENST00000371447 LIMD2Q9BT23 127 aa6.75□□□□□ -1.33
PDE6C-201ENST00000371447 SACSQ9NZJ4 4579 aa6.74□□□□□ -1.33
PDE6C-201ENST00000371447 COA5Q86WW8 74 aa6.73□□□□□ -1.33
PDE6C-201ENST00000371447 DMBT1Q9UGM3 2413 aaPredicted RBP6.73□□□□□ -1.33
PDE6C-201ENST00000371447 H3BPC8 53 aa6.73□□□□□ -1.33
PDE6C-201ENST00000371447 KMT2CQ8NEZ4 4911 aaKnown RBP6.73□□□□□ -1.33
PDE6C-201ENST00000371447 IGKV2D-30A0A075B6S6 120 aa6.73□□□□□ -1.33
PDE6C-201ENST00000371447 IGKV2-30P06310 120 aa6.73□□□□□ -1.33
PDE6C-201ENST00000371447 CYP4F30PQ9H0H9 118 aa6.73□□□□□ -1.33
PDE6C-201ENST00000371447 SPAG11AQ6PDA7 123 aa6.72□□□□□ -1.33
PDE6C-201ENST00000371447 ASB16-AS1Q495Z4 193 aa6.72□□□□□ -1.33
PDE6C-201ENST00000371447 CDC42SE1Q9NRR8 79 aa6.7□□□□□ -1.34
PDE6C-201ENST00000371447 DYNC1H1Q14204 4646 aaKnown RBP6.7□□□□□ -1.34
PDE6C-201ENST00000371447 C9orf92A6NGG3 77 aa6.7□□□□□ -1.34
PDE6C-201ENST00000371447 IGLV7-46A0A075B6I9 117 aa6.68□□□□□ -1.34
PDE6C-201ENST00000371447 SPANXA2-OT1Q8N9U9 137 aa6.67□□□□□ -1.34
PDE6C-201ENST00000371447 LINC00304Q8N9R0 145 aa6.66□□□□□ -1.34
PDE6C-201ENST00000371447 KRTAP21-3Q3LHN1 58 aa6.65□□□□□ -1.35
PDE6C-201ENST00000371447 HRES1P13985 223 aa6.64□□□□□ -1.35
PDE6C-201ENST00000371447 LOC101927531A0A1B0GV80 90 aa6.64□□□□□ -1.35
PDE6C-201ENST00000371447 Q75L30 129 aa6.62□□□□□ -1.35
PDE6C-201ENST00000371447 SPINK7P58062 85 aa6.61□□□□□ -1.35
PDE6C-201ENST00000371447 FAM229AH3BQW9 127 aa6.61□□□□□ -1.35
PDE6C-201ENST00000371447 SPINK1P00995 79 aa6.61□□□□□ -1.35
PDE6C-201ENST00000371447 CSAG1Q6PB30 78 aa6.58□□□□□ -1.36
PDE6C-201ENST00000371447 KRTAP13-3Q3SY46 172 aa6.57□□□□□ -1.36
PDE6C-201ENST00000371447 Q8N1X5 172 aa6.56□□□□□ -1.36
PDE6C-201ENST00000371447 KRTAP16-1A8MUX0 517 aa6.56□□□□□ -1.36
PDE6C-201ENST00000371447 RYR2Q92736 4967 aa6.56□□□□□ -1.36
PDE6C-201ENST00000371447 APOBP04114 4563 aaKnown RBP6.54□□□□□ -1.36
PDE6C-201ENST00000371447 A0A1B0GVY2 172 aa6.54□□□□□ -1.36
PDE6C-201ENST00000371447 LRP1Q07954 4544 aaKnown RBP6.54□□□□□ -1.36
PDE6C-201ENST00000371447 ACYP2P14621 99 aa6.52□□□□□ -1.37
PDE6C-201ENST00000371447 MYCBP2O75592 4640 aa6.47□□□□□ -1.37
PDE6C-201ENST00000371447 RYR3Q15413 4870 aa6.47□□□□□ -1.37
PDE6C-201ENST00000371447 KIAA1109Q2LD37 5005 aa6.46□□□□□ -1.38
PDE6C-201ENST00000371447 KRTAP10-4P60372 401 aaPredicted RBP6.45□□□□□ -1.38
PDE6C-201ENST00000371447 Q5VSD8 79 aa6.44□□□□□ -1.38
PDE6C-201ENST00000371447 DMAC1Q96GE9 116 aa6.44□□□□□ -1.38
PDE6C-201ENST00000371447 LINC01558Q9Y6Z2 57 aa6.42□□□□□ -1.38
PDE6C-201ENST00000371447 MIR22HGQ0VDD5 57 aa6.4□□□□□ -1.39
PDE6C-201ENST00000371447 A0A1B0GU69 56 aa6.39□□□□□ -1.39
PDE6C-201ENST00000371447 ROMO1P60602 79 aa6.37□□□□□ -1.39
PDE6C-201ENST00000371447 KRTAP17-1Q9BYP8 105 aa6.35□□□□□ -1.39
PDE6C-201ENST00000371447 FAT3Q8TDW7 4589 aa6.35□□□□□ -1.39
PDE6C-201ENST00000371447 PKHD1L1Q86WI1 4243 aa6.33□□□□□ -1.4
PDE6C-201ENST00000371447 RPS29P62273 56 aaKnown RBP6.31□□□□□ -1.4
PDE6C-201ENST00000371447 HSPG2P98160 4391 aa6.31□□□□□ -1.4
PDE6C-201ENST00000371447 A8MUU9 505 aa6.28□□□□□ -1.4
PDE6C-201ENST00000371447 EPPK1P58107 5090 aaKnown RBP6.28□□□□□ -1.4
PDE6C-201ENST00000371447 C20orf166-AS1Q96NR2 134 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms