RNA–Protein interactions for RNA: ENST00000371037.8

SGIP1-203, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SGIP1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-203ENST00000371037 CMYA5Q8N3K9 4069 aa3.39□□□□□ -1.87
SGIP1-203ENST00000371037 Q8N9P0 234 aaPredicted RBP3.39□□□□□ -1.87
SGIP1-203ENST00000371037 UNC79Q9P2D8 2635 aa3.38□□□□□ -1.87
SGIP1-203ENST00000371037 FBN1P35555 2871 aaKnown RBP3.38□□□□□ -1.87
SGIP1-203ENST00000371037 NBEAL1Q6ZS30 2694 aa3.37□□□□□ -1.87
SGIP1-203ENST00000371037 KRTAP10-8P60410 259 aa3.37□□□□□ -1.87
SGIP1-203ENST00000371037 FRAS1Q86XX4 4008 aa3.37□□□□□ -1.87
SGIP1-203ENST00000371037 CYP4F30PQ9H0H9 118 aa3.37□□□□□ -1.87
SGIP1-203ENST00000371037 NOTCH1P46531 2555 aa3.36□□□□□ -1.87
SGIP1-203ENST00000371037 STAB1Q9NY15 2570 aa3.36□□□□□ -1.87
SGIP1-203ENST00000371037 ATRQ13535 2644 aa3.36□□□□□ -1.87
SGIP1-203ENST00000371037 HELZ2Q9BYK8 2649 aaKnown RBP3.36□□□□□ -1.87
SGIP1-203ENST00000371037 MXRA5Q9NR99 2828 aa3.35□□□□□ -1.87
SGIP1-203ENST00000371037 KRTAP16-1A8MUX0 517 aa3.35□□□□□ -1.87
SGIP1-203ENST00000371037 SPATA8Q6RVD6 105 aa3.35□□□□□ -1.87
SGIP1-203ENST00000371037 SRRM2Q9UQ35 2752 aaKnown RBP3.35□□□□□ -1.87
SGIP1-203ENST00000371037 A8MUU9 505 aa3.35□□□□□ -1.87
SGIP1-203ENST00000371037 Q5W150 140 aa3.35□□□□□ -1.87
SGIP1-203ENST00000371037 KRTAP10-10P60014 251 aa3.34□□□□□ -1.87
SGIP1-203ENST00000371037 ZNF292O60281 2723 aa3.34□□□□□ -1.88
SGIP1-203ENST00000371037 MGAM2Q2M2H8 2515 aa3.34□□□□□ -1.88
SGIP1-203ENST00000371037 TEP1Q99973 2627 aaKnown RBP3.33□□□□□ -1.88
SGIP1-203ENST00000371037 KRTAP1-5Q9BYS1 174 aa3.33□□□□□ -1.88
SGIP1-203ENST00000371037 ROMO1P60602 79 aa3.33□□□□□ -1.88
SGIP1-203ENST00000371037 ZANQ9Y493 2812 aa3.32□□□□□ -1.88
SGIP1-203ENST00000371037 Q8NDZ9 215 aa3.31□□□□□ -1.88
SGIP1-203ENST00000371037 LINC00310P59036 64 aa3.31□□□□□ -1.88
SGIP1-203ENST00000371037 PDZD2O15018 2839 aa3.3□□□□□ -1.88
SGIP1-203ENST00000371037 RPL37P61927 97 aaKnown RBP3.3□□□□□ -1.88
SGIP1-203ENST00000371037 HIVEP1P15822 2718 aa3.29□□□□□ -1.88
SGIP1-203ENST00000371037 Q75L30 129 aa3.29□□□□□ -1.88
SGIP1-203ENST00000371037 DMBT1Q9UGM3 2413 aaPredicted RBP3.28□□□□□ -1.88
SGIP1-203ENST00000371037 C10orf95Q9H7T3 257 aa3.28□□□□□ -1.88
SGIP1-203ENST00000371037 A0A087X002 238 aa3.27□□□□□ -1.89
SGIP1-203ENST00000371037 SMCPP49901 116 aaPredicted RBP3.27□□□□□ -1.89
SGIP1-203ENST00000371037 Q6ZR54 194 aa3.27□□□□□ -1.89
SGIP1-203ENST00000371037 MMP24-AS1A0A0U1RRL7 71 aa3.26□□□□□ -1.89
SGIP1-203ENST00000371037 PANO1I0J062 215 aa3.25□□□□□ -1.89
SGIP1-203ENST00000371037 OCR1Q9BZK8 76 aa3.25□□□□□ -1.89
SGIP1-203ENST00000371037 TNP1P09430 55 aa3.25□□□□□ -1.89
SGIP1-203ENST00000371037 Q5XG85 94 aa3.25□□□□□ -1.89
SGIP1-203ENST00000371037 COL7A1Q02388 2944 aa3.25□□□□□ -1.89
SGIP1-203ENST00000371037 STAB2Q8WWQ8 2551 aa3.24□□□□□ -1.89
SGIP1-203ENST00000371037 KRTAP17-1Q9BYP8 105 aa3.24□□□□□ -1.89
SGIP1-203ENST00000371037 MAST4O15021 2626 aa3.23□□□□□ -1.89
SGIP1-203ENST00000371037 DNAH7Q8WXX0 4024 aa3.23□□□□□ -1.89
SGIP1-203ENST00000371037 PRO2289Q9P1D8 64 aa3.22□□□□□ -1.89
SGIP1-203ENST00000371037 SPANXA2-OT1Q8N9U9 137 aa3.22□□□□□ -1.89
SGIP1-203ENST00000371037 NDUFAF8A1L188 74 aa3.21□□□□□ -1.89
SGIP1-203ENST00000371037 TGP01266 2768 aa3.21□□□□□ -1.9
SGIP1-203ENST00000371037 OTOGQ6ZRI0 2925 aa3.21□□□□□ -1.9
SGIP1-203ENST00000371037 IGSF10Q6WRI0 2623 aa3.19□□□□□ -1.9
SGIP1-203ENST00000371037 PKD1L1Q8TDX9 2849 aa3.19□□□□□ -1.9
SGIP1-203ENST00000371037 KRTAP21-3Q3LHN1 58 aa3.18□□□□□ -1.9
SGIP1-203ENST00000371037 CYSTM1Q9H1C7 97 aa3.18□□□□□ -1.9
SGIP1-203ENST00000371037 TENM2Q9NT68 2774 aa3.17□□□□□ -1.9
SGIP1-203ENST00000371037 FLNCQ14315 2725 aa3.17□□□□□ -1.9
SGIP1-203ENST00000371037 A8MU10 97 aa3.17□□□□□ -1.9
SGIP1-203ENST00000371037 KRTAP26-1Q6PEX3 210 aa3.17□□□□□ -1.9
SGIP1-203ENST00000371037 TENM1Q9UKZ4 2725 aa3.16□□□□□ -1.9
SGIP1-203ENST00000371037 KRTAP4-16G5E9R7 235 aaPredicted RBP3.14□□□□□ -1.91
SGIP1-203ENST00000371037 HECTD4Q9Y4D8 3996 aa3.13□□□□□ -1.91
SGIP1-203ENST00000371037 FLNBO75369 2602 aaKnown RBP3.13□□□□□ -1.91
SGIP1-203ENST00000371037 PRO0461Q9UI25 63 aa3.13□□□□□ -1.91
SGIP1-203ENST00000371037 CRCT1Q9UGL9 99 aa3.13□□□□□ -1.91
SGIP1-203ENST00000371037 LINC00472Q9H8W2 130 aa3.11□□□□□ -1.91
SGIP1-203ENST00000371037 KMT2AQ03164 3969 aa3.11□□□□□ -1.91
SGIP1-203ENST00000371037 TENM4Q6N022 2769 aa3.1□□□□□ -1.91
SGIP1-203ENST00000371037 LINC01558Q9Y6Z2 57 aa3.1□□□□□ -1.91
SGIP1-203ENST00000371037 NOTCH2NLQ7Z3S9 236 aa3.09□□□□□ -1.92
SGIP1-203ENST00000371037 KRTAP23-1A1A580 65 aa3.08□□□□□ -1.92
SGIP1-203ENST00000371037 MEGF8Q7Z7M0 2845 aa3.08□□□□□ -1.92
SGIP1-203ENST00000371037 KRTAP13-2Q52LG2 175 aa3.08□□□□□ -1.92
SGIP1-203ENST00000371037 ASB16-AS1Q495Z4 193 aa3.07□□□□□ -1.92
SGIP1-203ENST00000371037 SPRR1AP35321 89 aa3.07□□□□□ -1.92
SGIP1-203ENST00000371037 Q6ZRN7 208 aaPredicted RBP3.06□□□□□ -1.92
SGIP1-203ENST00000371037 XP32Q5T750 250 aa3.06□□□□□ -1.92
SGIP1-203ENST00000371037 RPS29P62273 56 aaKnown RBP3.05□□□□□ -1.92
SGIP1-203ENST00000371037 KRTAP11-1Q8IUC1 163 aa3.05□□□□□ -1.92
SGIP1-203ENST00000371037 VWFP04275 2813 aa3.04□□□□□ -1.92
SGIP1-203ENST00000371037 Q5VV11 94 aa3.04□□□□□ -1.92
SGIP1-203ENST00000371037 PRKDCP78527 4128 aaKnown RBP3.03□□□□□ -1.92
SGIP1-203ENST00000371037 KRTAP25-1Q3LHN0 102 aa3.01□□□□□ -1.93
SGIP1-203ENST00000371037 KRTAP29-1A8MX34 341 aaPredicted RBP3□□□□□ -1.93
SGIP1-203ENST00000371037 A6NN06 94 aa3□□□□□ -1.93
SGIP1-203ENST00000371037 TENM3Q9P273 2699 aa2.99□□□□□ -1.93
SGIP1-203ENST00000371037 ALMS1Q8TCU4 4167 aa2.98□□□□□ -1.93
SGIP1-203ENST00000371037 TPRXLQ17RH7 258 aa2.98□□□□□ -1.93
SGIP1-203ENST00000371037 VPS13BQ7Z7G8 4022 aa2.96□□□□□ -1.94
SGIP1-203ENST00000371037 KRTAP3-3Q9BYR6 98 aa2.93□□□□□ -1.94
SGIP1-203ENST00000371037 KRTAP3-2Q9BYR7 98 aa2.93□□□□□ -1.94
SGIP1-203ENST00000371037 DNAH3Q8TD57 4116 aa2.93□□□□□ -1.94
SGIP1-203ENST00000371037 H0YAA0 97 aa2.93□□□□□ -1.94
SGIP1-203ENST00000371037 LORP23490 312 aaPredicted RBP2.93□□□□□ -1.94
SGIP1-203ENST00000371037 HUWE1Q7Z6Z7 4374 aaKnown RBP2.91□□□□□ -1.94
SGIP1-203ENST00000371037 DNAH6Q9C0G6 4158 aa2.87□□□□□ -1.95
SGIP1-203ENST00000371037 PP632Q6XCG6 107 aa2.87□□□□□ -1.95
SGIP1-203ENST00000371037 KRTAP12-2P59991 146 aa2.86□□□□□ -1.95
SGIP1-203ENST00000371037 KRTAP13-3Q3SY46 172 aa2.86□□□□□ -1.95
SGIP1-203ENST00000371037 KRTAP15-1Q3LI76 137 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms