RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 Q8NBF4 154 aa8.6□□□□□ -1.03
RPF1-202ENST00000370656 FP248Q71RG6 208 aaPredicted RBP8.59□□□□□ -1.03
RPF1-202ENST00000370656 KRTAP4-11Q9BYQ6 195 aa8.59□□□□□ -1.03
RPF1-202ENST00000370656 LINC00846Q9NV44 126 aa8.58□□□□□ -1.04
RPF1-202ENST00000370656 FSIP2Q5CZC0 6907 aa8.57□□□□□ -1.04
RPF1-202ENST00000370656 SSBP3-AS1Q7Z2R9 100 aa8.56□□□□□ -1.04
RPF1-202ENST00000370656 ASB16-AS1Q495Z4 193 aa8.55□□□□□ -1.04
RPF1-202ENST00000370656 LINC00643Q86TS7 51 aa8.54□□□□□ -1.04
RPF1-202ENST00000370656 VPS25Q9BRG1 176 aa8.54□□□□□ -1.04
RPF1-202ENST00000370656 TRBV7-7A0A0K0K1E9 115 aa8.53□□□□□ -1.04
RPF1-202ENST00000370656 SEC61BP60468 96 aaKnown RBP8.53□□□□□ -1.04
RPF1-202ENST00000370656 IGLV9-49A0A0B4J1Y8 123 aa8.52□□□□□ -1.05
RPF1-202ENST00000370656 KRTAP13-3Q3SY46 172 aa8.51□□□□□ -1.05
RPF1-202ENST00000370656 A0A0G2JQZ4 141 aa8.5□□□□□ -1.05
RPF1-202ENST00000370656 CD164Q04900 197 aa8.5□□□□□ -1.05
RPF1-202ENST00000370656 MOBPQ13875 183 aa8.5□□□□□ -1.05
RPF1-202ENST00000370656 C9orf153Q5TBE3 101 aa8.5□□□□□ -1.05
RPF1-202ENST00000370656 UBL5Q9BZL1 73 aa8.5□□□□□ -1.05
RPF1-202ENST00000370656 Q6ZVQ6 151 aa8.48□□□□□ -1.05
RPF1-202ENST00000370656 SIGMAR1Q99720 223 aa8.48□□□□□ -1.05
RPF1-202ENST00000370656 SPINK1P00995 79 aa8.46□□□□□ -1.06
RPF1-202ENST00000370656 MT-ATP8P03928 68 aa8.45□□□□□ -1.06
RPF1-202ENST00000370656 ATP5EP2Q5VTU8 51 aa8.45□□□□□ -1.06
RPF1-202ENST00000370656 NREPQ16612 68 aa8.44□□□□□ -1.06
RPF1-202ENST00000370656 KRTAP4-1Q9BYQ7 146 aa8.44□□□□□ -1.06
RPF1-202ENST00000370656 IMUPQ9GZP8 106 aa8.44□□□□□ -1.06
RPF1-202ENST00000370656 A0A087WSZ3 146 aa8.43□□□□□ -1.06
RPF1-202ENST00000370656 KRTAP9-7A8MTY7 169 aa8.43□□□□□ -1.06
RPF1-202ENST00000370656 CXCL6P80162 114 aa8.43□□□□□ -1.06
RPF1-202ENST00000370656 Q5XG85 94 aa8.42□□□□□ -1.06
RPF1-202ENST00000370656 LINC00472Q9H8W2 130 aa8.4□□□□□ -1.06
RPF1-202ENST00000370656 SS18L2Q9UHA2 77 aa8.39□□□□□ -1.07
RPF1-202ENST00000370656 IGKV3D-7A0A0C4DH55 119 aa8.36□□□□□ -1.07
RPF1-202ENST00000370656 RPS29P62273 56 aaKnown RBP8.36□□□□□ -1.07
RPF1-202ENST00000370656 BPY2O14599 106 aa8.35□□□□□ -1.07
RPF1-202ENST00000370656 Q96NJ1 140 aa8.35□□□□□ -1.07
RPF1-202ENST00000370656 HRCT1Q6UXD1 115 aa8.34□□□□□ -1.07
RPF1-202ENST00000370656 DSCR10P59022 87 aa8.33□□□□□ -1.08
RPF1-202ENST00000370656 J3KT08 172 aa8.32□□□□□ -1.08
RPF1-202ENST00000370656 SCGB1A1P11684 91 aa8.32□□□□□ -1.08
RPF1-202ENST00000370656 LCE5AQ5TCM9 118 aa8.3□□□□□ -1.08
RPF1-202ENST00000370656 IGKV4-1P06312 121 aa8.28□□□□□ -1.08
RPF1-202ENST00000370656 LIMD2Q9BT23 127 aa8.28□□□□□ -1.08
RPF1-202ENST00000370656 HIST1H4AP62805 103 aaKnown RBP8.27□□□□□ -1.09
RPF1-202ENST00000370656 MT1HP80294 61 aa8.26□□□□□ -1.09
RPF1-202ENST00000370656 A8MWP4 228 aa8.25□□□□□ -1.09
RPF1-202ENST00000370656 C1orf195Q5TG92 126 aa8.25□□□□□ -1.09
RPF1-202ENST00000370656 DEFB116Q30KQ4 102 aa8.24□□□□□ -1.09
RPF1-202ENST00000370656 PRR15Q8IV56 129 aa8.24□□□□□ -1.09
RPF1-202ENST00000370656 KRTAP19-2Q3LHN2 52 aa8.23□□□□□ -1.09
RPF1-202ENST00000370656 A0A087WVE0 104 aa8.22□□□□□ -1.09
RPF1-202ENST00000370656 K7EQZ3 153 aa8.22□□□□□ -1.09
RPF1-202ENST00000370656 Q8N9L7 120 aa8.22□□□□□ -1.09
RPF1-202ENST00000370656 KRTAP19-4Q3LI73 84 aa8.21□□□□□ -1.1
RPF1-202ENST00000370656 PCOTHQ58A44 107 aa8.21□□□□□ -1.1
RPF1-202ENST00000370656 NDUFB1O75438 58 aa8.19□□□□□ -1.1
RPF1-202ENST00000370656 FAM236AA0A1B0GUQ0 79 aa8.18□□□□□ -1.1
RPF1-202ENST00000370656 FAM236BA0A1B0GV22 79 aa8.18□□□□□ -1.1
RPF1-202ENST00000370656 KRTAP10-6P60371 365 aaPredicted RBP8.18□□□□□ -1.1
RPF1-202ENST00000370656 A0A1B0GVX0 72 aa8.17□□□□□ -1.1
RPF1-202ENST00000370656 M0R2T5 61 aa8.17□□□□□ -1.1
RPF1-202ENST00000370656 C9orf92A6NGG3 77 aa8.14□□□□□ -1.11
RPF1-202ENST00000370656 HCG22E2RYF7 251 aa8.13□□□□□ -1.11
RPF1-202ENST00000370656 MMP24-AS1A0A0U1RRL7 71 aa8.12□□□□□ -1.11
RPF1-202ENST00000370656 ATOX1O00244 68 aa8.12□□□□□ -1.11
RPF1-202ENST00000370656 KRTAP9-3Q9BYQ3 159 aa8.12□□□□□ -1.11
RPF1-202ENST00000370656 C8orf87E5RJ46 101 aa8.11□□□□□ -1.11
RPF1-202ENST00000370656 C8orf17Q9NRJ1 99 aa8.11□□□□□ -1.11
RPF1-202ENST00000370656 COX6B2Q6YFQ2 88 aa8.1□□□□□ -1.11
RPF1-202ENST00000370656 IGHV6-1A0A0B4J1U7 121 aa8.08□□□□□ -1.12
RPF1-202ENST00000370656 SMIM20Q8N5G0 67 aa8.08□□□□□ -1.12
RPF1-202ENST00000370656 CASC2Q6XLA1 102 aa8.07□□□□□ -1.12
RPF1-202ENST00000370656 NOTCH2NLQ7Z3S9 236 aa8.07□□□□□ -1.12
RPF1-202ENST00000370656 hDV103S1A0JD37 113 aa8.06□□□□□ -1.12
RPF1-202ENST00000370656 TMEM254Q8TBM7 123 aa8.05□□□□□ -1.12
RPF1-202ENST00000370656 OCR1Q9BZK8 76 aa8.05□□□□□ -1.12
RPF1-202ENST00000370656 LINC00313P59037 77 aa8.04□□□□□ -1.12
RPF1-202ENST00000370656 FLGP20930 4061 aaPredicted RBP8.04□□□□□ -1.12
RPF1-202ENST00000370656 TRAV7A0A075B6U4 112 aa8.03□□□□□ -1.12
RPF1-202ENST00000370656 WFDC13Q8IUB5 93 aa8.03□□□□□ -1.12
RPF1-202ENST00000370656 ANAPC13Q9BS18 74 aa8.03□□□□□ -1.12
RPF1-202ENST00000370656 KRTAP16-1A8MUX0 517 aa8.02□□□□□ -1.13
RPF1-202ENST00000370656 SERP2Q8N6R1 65 aa8.02□□□□□ -1.13
RPF1-202ENST00000370656 MRPL34Q9BQ48 92 aaKnown RBP8.01□□□□□ -1.13
RPF1-202ENST00000370656 PCP4P48539 62 aa8□□□□□ -1.13
RPF1-202ENST00000370656 KRTAP5-3Q6L8H2 238 aa8□□□□□ -1.13
RPF1-202ENST00000370656 RPL37P61927 97 aaKnown RBP7.99□□□□□ -1.13
RPF1-202ENST00000370656 Q8N9P0 234 aaPredicted RBP7.99□□□□□ -1.13
RPF1-202ENST00000370656 COX7CP15954 63 aa7.98□□□□□ -1.13
RPF1-202ENST00000370656 TP53AIP1Q9HCN2 124 aa7.96□□□□□ -1.14
RPF1-202ENST00000370656 UQCRQO14949 82 aa7.95□□□□□ -1.14
RPF1-202ENST00000370656 C5orf47Q569G3 176 aa7.91□□□□□ -1.14
RPF1-202ENST00000370656 C20orf166-AS1Q96NR2 134 aa7.9□□□□□ -1.14
RPF1-202ENST00000370656 A8MUU9 505 aa7.89□□□□□ -1.15
RPF1-202ENST00000370656 USH2AO75445 5202 aa7.88□□□□□ -1.15
RPF1-202ENST00000370656 SSPOA2VEC9 5147 aa7.88□□□□□ -1.15
RPF1-202ENST00000370656 CCDC179H3BU77 68 aa7.87□□□□□ -1.15
RPF1-202ENST00000370656 H3BPC8 53 aa7.86□□□□□ -1.15
RPF1-202ENST00000370656 KLKP1Q107X0 134 aa7.85□□□□□ -1.15
RPF1-202ENST00000370656 NDUFS5O43920 106 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 1093 ms