RNA–Protein interactions for RNA: ENST00000370536.4

SOX3-201, Transcript of SRY-box 3, humanhuman

APPRIS P1 BASIC

Gene SOX3, Length 2,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3-201ENST00000370536 Q96NJ1 140 aa12.44□□□□□ -0.42
SOX3-201ENST00000370536 Q6ZSA8 131 aa12.43□□□□□ -0.42
SOX3-201ENST00000370536 LRP1BQ9NZR2 4599 aa12.42□□□□□ -0.42
SOX3-201ENST00000370536 A8MUN3 132 aa12.4□□□□□ -0.43
SOX3-201ENST00000370536 SACSQ9NZJ4 4579 aa12.39□□□□□ -0.43
SOX3-201ENST00000370536 MMP24-AS1A0A0U1RRL7 71 aa12.38□□□□□ -0.43
SOX3-201ENST00000370536 LIMD2Q9BT23 127 aa12.35□□□□□ -0.43
SOX3-201ENST00000370536 Q8N9P0 234 aaPredicted RBP12.34□□□□□ -0.43
SOX3-201ENST00000370536 Q5VV11 94 aa12.34□□□□□ -0.43
SOX3-201ENST00000370536 IGLV7-46A0A075B6I9 117 aa12.29□□□□□ -0.44
SOX3-201ENST00000370536 CDK2AP2O75956 126 aa12.29□□□□□ -0.44
SOX3-201ENST00000370536 PMAIP1Q13794 54 aa12.29□□□□□ -0.44
SOX3-201ENST00000370536 ASB16-AS1Q495Z4 193 aa12.28□□□□□ -0.44
SOX3-201ENST00000370536 C8orf17Q9NRJ1 99 aa12.28□□□□□ -0.44
SOX3-201ENST00000370536 TP53AIP1Q9HCN2 124 aa12.27□□□□□ -0.45
SOX3-201ENST00000370536 A0A1B0GVX0 72 aa12.26□□□□□ -0.45
SOX3-201ENST00000370536 VPS13BQ7Z7G8 4022 aa12.26□□□□□ -0.45
SOX3-201ENST00000370536 SSBP3-AS1Q7Z2R9 100 aa12.25□□□□□ -0.45
SOX3-201ENST00000370536 IGHV6-1A0A0B4J1U7 121 aa12.24□□□□□ -0.45
SOX3-201ENST00000370536 PKHD1P08F94 4074 aa12.24□□□□□ -0.45
SOX3-201ENST00000370536 A0A087X002 238 aa12.23□□□□□ -0.45
SOX3-201ENST00000370536 COA5Q86WW8 74 aa12.23□□□□□ -0.45
SOX3-201ENST00000370536 CHKB-CPT1BH3BT56 60 aa12.23□□□□□ -0.45
SOX3-201ENST00000370536 PRR15LQ9BU68 103 aa12.23□□□□□ -0.45
SOX3-201ENST00000370536 CD164Q04900 197 aa12.22□□□□□ -0.45
SOX3-201ENST00000370536 KRTAP13-2Q52LG2 175 aa12.2□□□□□ -0.46
SOX3-201ENST00000370536 SPINK6Q6UWN8 80 aa12.19□□□□□ -0.46
SOX3-201ENST00000370536 SEC61GP60059 68 aa12.19□□□□□ -0.46
SOX3-201ENST00000370536 LOC101927531A0A1B0GV80 90 aa12.17□□□□□ -0.46
SOX3-201ENST00000370536 Q75L30 129 aa12.17□□□□□ -0.46
SOX3-201ENST00000370536 NOTCH2NLQ7Z3S9 236 aa12.16□□□□□ -0.46
SOX3-201ENST00000370536 PCOTHQ58A44 107 aa12.15□□□□□ -0.46
SOX3-201ENST00000370536 MRPL34Q9BQ48 92 aaKnown RBP12.15□□□□□ -0.46
SOX3-201ENST00000370536 A8MU10 97 aa12.14□□□□□ -0.47
SOX3-201ENST00000370536 KRTAP1-4P0C5Y4 121 aa12.14□□□□□ -0.47
SOX3-201ENST00000370536 DYNC1H1Q14204 4646 aaKnown RBP12.13□□□□□ -0.47
SOX3-201ENST00000370536 NDUFS5O43920 106 aa12.11□□□□□ -0.47
SOX3-201ENST00000370536 A6NED7 52 aa12.06□□□□□ -0.48
SOX3-201ENST00000370536 LINC01558Q9Y6Z2 57 aa12.06□□□□□ -0.48
SOX3-201ENST00000370536 ATP11AUNQ6ZP68 121 aa12.05□□□□□ -0.48
SOX3-201ENST00000370536 LCA10Q71F78 164 aa12.05□□□□□ -0.48
SOX3-201ENST00000370536 PLA2G1BP04054 148 aaKnown RBP12.04□□□□□ -0.48
SOX3-201ENST00000370536 C8orf87E5RJ46 101 aa12.03□□□□□ -0.48
SOX3-201ENST00000370536 RYR2Q92736 4967 aa12.03□□□□□ -0.48
SOX3-201ENST00000370536 A0A1B0GVY2 172 aa12.02□□□□□ -0.48
SOX3-201ENST00000370536 SPAG11AQ6PDA7 123 aa12□□□□□ -0.49
SOX3-201ENST00000370536 CDC42SE1Q9NRR8 79 aa11.99□□□□□ -0.49
SOX3-201ENST00000370536 HRES1P13985 223 aa11.99□□□□□ -0.49
SOX3-201ENST00000370536 SPTSSBQ8NFR3 76 aa11.99□□□□□ -0.49
SOX3-201ENST00000370536 APOBP04114 4563 aaKnown RBP11.98□□□□□ -0.49
SOX3-201ENST00000370536 SMR3BP02814 79 aaPredicted RBP11.98□□□□□ -0.49
SOX3-201ENST00000370536 TYMSOSQ8TAI1 123 aa11.96□□□□□ -0.49
SOX3-201ENST00000370536 KTN1-AS1Q86SY8 53 aa11.93□□□□□ -0.5
SOX3-201ENST00000370536 FAT1Q14517 4588 aa11.92□□□□□ -0.5
SOX3-201ENST00000370536 C4orf48Q5BLP8 95 aa11.92□□□□□ -0.5
SOX3-201ENST00000370536 LINC00313P59037 77 aa11.91□□□□□ -0.5
SOX3-201ENST00000370536 KMT2CQ8NEZ4 4911 aaKnown RBP11.91□□□□□ -0.5
SOX3-201ENST00000370536 PRR26Q8N8Z3 221 aa11.89□□□□□ -0.51
SOX3-201ENST00000370536 A6NN06 94 aa11.88□□□□□ -0.51
SOX3-201ENST00000370536 Q5W150 140 aa11.88□□□□□ -0.51
SOX3-201ENST00000370536 KRTAP13-3Q3SY46 172 aa11.87□□□□□ -0.51
SOX3-201ENST00000370536 SPINK1P00995 79 aa11.86□□□□□ -0.51
SOX3-201ENST00000370536 KRTAP10-4P60372 401 aaPredicted RBP11.82□□□□□ -0.52
SOX3-201ENST00000370536 SPINK7P58062 85 aa11.81□□□□□ -0.52
SOX3-201ENST00000370536 LINC00304Q8N9R0 145 aa11.8□□□□□ -0.52
SOX3-201ENST00000370536 FAM229AH3BQW9 127 aa11.8□□□□□ -0.52
SOX3-201ENST00000370536 KRTAP16-1A8MUX0 517 aa11.79□□□□□ -0.52
SOX3-201ENST00000370536 ACYP2P14621 99 aa11.79□□□□□ -0.52
SOX3-201ENST00000370536 PKHD1L1Q86WI1 4243 aa11.77□□□□□ -0.53
SOX3-201ENST00000370536 RETNLBQ9BQ08 111 aa11.75□□□□□ -0.53
SOX3-201ENST00000370536 RPS29P62273 56 aaKnown RBP11.71□□□□□ -0.53
SOX3-201ENST00000370536 C7orf65Q6ZTY9 151 aa11.7□□□□□ -0.54
SOX3-201ENST00000370536 RBM12B-AS1Q9P1G2 102 aa11.7□□□□□ -0.54
SOX3-201ENST00000370536 DMAC1Q96GE9 116 aa11.69□□□□□ -0.54
SOX3-201ENST00000370536 IGKV2-30P06310 120 aa11.65□□□□□ -0.55
SOX3-201ENST00000370536 RYR3Q15413 4870 aa11.6□□□□□ -0.55
SOX3-201ENST00000370536 HSPG2P98160 4391 aa11.57□□□□□ -0.56
SOX3-201ENST00000370536 A0A1B0GU69 56 aa11.54□□□□□ -0.56
SOX3-201ENST00000370536 IGKV2D-30A0A075B6S6 120 aa11.5□□□□□ -0.57
SOX3-201ENST00000370536 C9orf92A6NGG3 77 aa11.48□□□□□ -0.57
SOX3-201ENST00000370536 SPATA8Q6RVD6 105 aa11.47□□□□□ -0.57
SOX3-201ENST00000370536 Q5VSD8 79 aa11.45□□□□□ -0.58
SOX3-201ENST00000370536 TNXBP22105 4242 aa11.45□□□□□ -0.58
SOX3-201ENST00000370536 RYR1P21817 5038 aa11.44□□□□□ -0.58
SOX3-201ENST00000370536 LRP1Q07954 4544 aaKnown RBP11.44□□□□□ -0.58
SOX3-201ENST00000370536 Q8N1X5 172 aa11.39□□□□□ -0.59
SOX3-201ENST00000370536 UQCR11O14957 56 aa11.39□□□□□ -0.59
SOX3-201ENST00000370536 FLG2Q5D862 2391 aaPredicted RBP11.37□□□□□ -0.59
SOX3-201ENST00000370536 MIR22HGQ0VDD5 57 aa11.37□□□□□ -0.59
SOX3-201ENST00000370536 C20orf166-AS1Q96NR2 134 aa11.37□□□□□ -0.59
SOX3-201ENST00000370536 A8MUU9 505 aa11.36□□□□□ -0.59
SOX3-201ENST00000370536 FAT3Q8TDW7 4589 aa11.36□□□□□ -0.59
SOX3-201ENST00000370536 KRTAP10-8P60410 259 aa11.35□□□□□ -0.59
SOX3-201ENST00000370536 KRTAP17-1Q9BYP8 105 aa11.34□□□□□ -0.59
SOX3-201ENST00000370536 PRAC1Q96KF2 57 aa11.29□□□□□ -0.6
SOX3-201ENST00000370536 KIAA1109Q2LD37 5005 aa11.26□□□□□ -0.61
SOX3-201ENST00000370536 ADM2Q7Z4H4 148 aa11.23□□□□□ -0.61
SOX3-201ENST00000370536 EPPK1P58107 5090 aaKnown RBP11.16□□□□□ -0.62
SOX3-201ENST00000370536 MYCBP2O75592 4640 aa11.13□□□□□ -0.63
SOX3-201ENST00000370536 DMBT1Q9UGM3 2413 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms