RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 ASB16-AS1Q495Z4 193 aa5.31□□□□□ -1.56
LCA5-201ENST00000369846 IGLV7-43P04211 117 aa5.3□□□□□ -1.56
LCA5-201ENST00000369846 LINC00483Q53H64 154 aa5.29□□□□□ -1.56
LCA5-201ENST00000369846 UBR5O95071 2799 aaPredicted RBP5.29□□□□□ -1.56
LCA5-201ENST00000369846 LINC00472Q9H8W2 130 aa5.29□□□□□ -1.56
LCA5-201ENST00000369846 Q5W150 140 aa5.29□□□□□ -1.56
LCA5-201ENST00000369846 COX6B2Q6YFQ2 88 aa5.28□□□□□ -1.56
LCA5-201ENST00000369846 RPL37P61927 97 aaKnown RBP5.28□□□□□ -1.56
LCA5-201ENST00000369846 TENM4Q6N022 2769 aa5.28□□□□□ -1.56
LCA5-201ENST00000369846 PDZD2O15018 2839 aa5.28□□□□□ -1.56
LCA5-201ENST00000369846 ZCCHC13Q8WW36 166 aaKnown RBP5.27□□□□□ -1.57
LCA5-201ENST00000369846 PKD1L1Q8TDX9 2849 aa5.26□□□□□ -1.57
LCA5-201ENST00000369846 K7EIL1 84 aa5.26□□□□□ -1.57
LCA5-201ENST00000369846 KRTAP25-1Q3LHN0 102 aa5.25□□□□□ -1.57
LCA5-201ENST00000369846 SPATA8Q6RVD6 105 aa5.25□□□□□ -1.57
LCA5-201ENST00000369846 HIVEP1P15822 2718 aa5.23□□□□□ -1.57
LCA5-201ENST00000369846 A0A087WTM6 91 aa5.23□□□□□ -1.57
LCA5-201ENST00000369846 SPRR1AP35321 89 aa5.22□□□□□ -1.57
LCA5-201ENST00000369846 SMR3BP02814 79 aaPredicted RBP5.21□□□□□ -1.57
LCA5-201ENST00000369846 ITPR2Q14571 2701 aa5.21□□□□□ -1.58
LCA5-201ENST00000369846 H1FX-AS1Q4G0G2 97 aa5.19□□□□□ -1.58
LCA5-201ENST00000369846 TENM1Q9UKZ4 2725 aa5.19□□□□□ -1.58
LCA5-201ENST00000369846 KRTAP29-1A8MX34 341 aaPredicted RBP5.18□□□□□ -1.58
LCA5-201ENST00000369846 Q6ZR54 194 aa5.18□□□□□ -1.58
LCA5-201ENST00000369846 KMT2BQ9UMN6 2715 aaPredicted RBP5.18□□□□□ -1.58
LCA5-201ENST00000369846 TRRAPQ9Y4A5 3859 aa5.17□□□□□ -1.58
LCA5-201ENST00000369846 TNP2Q05952 138 aa5.16□□□□□ -1.58
LCA5-201ENST00000369846 KRTAP26-1Q6PEX3 210 aa5.16□□□□□ -1.58
LCA5-201ENST00000369846 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.15□□□□□ -1.58
LCA5-201ENST00000369846 KRTAP10-11P60412 298 aa5.15□□□□□ -1.59
LCA5-201ENST00000369846 R4GN34 69 aa5.14□□□□□ -1.59
LCA5-201ENST00000369846 SPRR1BP22528 89 aa5.13□□□□□ -1.59
LCA5-201ENST00000369846 KRTAP10-3P60369 221 aa5.1□□□□□ -1.59
LCA5-201ENST00000369846 S4R3F8 94 aa5.1□□□□□ -1.59
LCA5-201ENST00000369846 A8MUU9 505 aa5.09□□□□□ -1.6
LCA5-201ENST00000369846 SRRM2Q9UQ35 2752 aaKnown RBP5.09□□□□□ -1.6
LCA5-201ENST00000369846 LCE6AA0A183 80 aa5.08□□□□□ -1.6
LCA5-201ENST00000369846 Q6ZSA8 131 aa5.08□□□□□ -1.6
LCA5-201ENST00000369846 OTOGQ6ZRI0 2925 aa5.08□□□□□ -1.6
LCA5-201ENST00000369846 CSMD3Q7Z407 3707 aa5.07□□□□□ -1.6
LCA5-201ENST00000369846 TENM3Q9P273 2699 aa5.07□□□□□ -1.6
LCA5-201ENST00000369846 A0A087X002 238 aa5.07□□□□□ -1.6
LCA5-201ENST00000369846 NOTCH2NLQ7Z3S9 236 aa5.07□□□□□ -1.6
LCA5-201ENST00000369846 PANO1I0J062 215 aa5.06□□□□□ -1.6
LCA5-201ENST00000369846 C20orf166-AS1Q96NR2 134 aa5.06□□□□□ -1.6
LCA5-201ENST00000369846 FBN1P35555 2871 aaKnown RBP5.06□□□□□ -1.6
LCA5-201ENST00000369846 ANK3Q12955 4377 aaKnown RBP5.05□□□□□ -1.6
LCA5-201ENST00000369846 M0QZ58 72 aa5.04□□□□□ -1.6
LCA5-201ENST00000369846 PLAC4Q8WY50 150 aa5.04□□□□□ -1.6
LCA5-201ENST00000369846 KRTAP4-16G5E9R7 235 aaPredicted RBP5.02□□□□□ -1.61
LCA5-201ENST00000369846 KRTAP11-1Q8IUC1 163 aa5.02□□□□□ -1.61
LCA5-201ENST00000369846 COL7A1Q02388 2944 aa5.01□□□□□ -1.61
LCA5-201ENST00000369846 KRTAP1-3Q8IUG1 177 aa5□□□□□ -1.61
LCA5-201ENST00000369846 SEC61BP60468 96 aaKnown RBP4.97□□□□□ -1.61
LCA5-201ENST00000369846 PLAC8Q9NZF1 115 aa4.96□□□□□ -1.62
LCA5-201ENST00000369846 ANK2Q01484 3957 aa4.95□□□□□ -1.62
LCA5-201ENST00000369846 C10orf95Q9H7T3 257 aa4.93□□□□□ -1.62
LCA5-201ENST00000369846 KRTAP21-3Q3LHN1 58 aa4.93□□□□□ -1.62
LCA5-201ENST00000369846 KRTAP1-5Q9BYS1 174 aa4.93□□□□□ -1.62
LCA5-201ENST00000369846 TENM2Q9NT68 2774 aa4.91□□□□□ -1.62
LCA5-201ENST00000369846 KRTAP1-1Q07627 177 aa4.91□□□□□ -1.62
LCA5-201ENST00000369846 M0R2T5 61 aa4.89□□□□□ -1.63
LCA5-201ENST00000369846 LYSTQ99698 3801 aa4.88□□□□□ -1.63
LCA5-201ENST00000369846 DNAH10Q8IVF4 4471 aa4.85□□□□□ -1.63
LCA5-201ENST00000369846 KRTAP7-1Q8IUC3 87 aa4.85□□□□□ -1.63
LCA5-201ENST00000369846 P0C880 135 aa4.79□□□□□ -1.64
LCA5-201ENST00000369846 H0YAA0 97 aa4.78□□□□□ -1.64
LCA5-201ENST00000369846 KRTAP10-1P60331 282 aa4.73□□□□□ -1.65
LCA5-201ENST00000369846 KRTAP10-2P60368 255 aa4.73□□□□□ -1.65
LCA5-201ENST00000369846 KRTAP10-8P60410 259 aa4.73□□□□□ -1.65
LCA5-201ENST00000369846 DNAH9Q9NYC9 4486 aa4.71□□□□□ -1.66
LCA5-201ENST00000369846 Q5VSD8 79 aa4.7□□□□□ -1.66
LCA5-201ENST00000369846 TNP1P09430 55 aa4.7□□□□□ -1.66
LCA5-201ENST00000369846 TGP01266 2768 aa4.69□□□□□ -1.66
LCA5-201ENST00000369846 DNAH1Q9P2D7 4330 aa4.67□□□□□ -1.66
LCA5-201ENST00000369846 DNAH7Q8WXX0 4024 aa4.67□□□□□ -1.66
LCA5-201ENST00000369846 KRTAP13-2Q52LG2 175 aa4.66□□□□□ -1.66
LCA5-201ENST00000369846 KRTAP13-1Q8IUC0 172 aa4.65□□□□□ -1.66
LCA5-201ENST00000369846 FRAS1Q86XX4 4008 aa4.65□□□□□ -1.66
LCA5-201ENST00000369846 CMYA5Q8N3K9 4069 aa4.63□□□□□ -1.67
LCA5-201ENST00000369846 PP632Q6XCG6 107 aa4.63□□□□□ -1.67
LCA5-201ENST00000369846 HUWE1Q7Z6Z7 4374 aaKnown RBP4.6□□□□□ -1.67
LCA5-201ENST00000369846 FBN3Q75N90 2809 aa4.57□□□□□ -1.68
LCA5-201ENST00000369846 Q6ZRN7 208 aaPredicted RBP4.56□□□□□ -1.68
LCA5-201ENST00000369846 RPS29P62273 56 aaKnown RBP4.54□□□□□ -1.68
LCA5-201ENST00000369846 MEGF8Q7Z7M0 2845 aa4.53□□□□□ -1.68
LCA5-201ENST00000369846 PLECQ15149 4684 aaKnown RBP4.52□□□□□ -1.69
LCA5-201ENST00000369846 DNAH8Q96JB1 4490 aa4.51□□□□□ -1.69
LCA5-201ENST00000369846 DNAH3Q8TD57 4116 aa4.5□□□□□ -1.69
LCA5-201ENST00000369846 TPRXLQ17RH7 258 aa4.5□□□□□ -1.69
LCA5-201ENST00000369846 KMT2AQ03164 3969 aa4.47□□□□□ -1.69
LCA5-201ENST00000369846 DNAH17Q9UFH2 4485 aa4.46□□□□□ -1.7
LCA5-201ENST00000369846 STARD9Q9P2P6 4700 aa4.43□□□□□ -1.7
LCA5-201ENST00000369846 HECTD4Q9Y4D8 3996 aa4.43□□□□□ -1.7
LCA5-201ENST00000369846 DNAH6Q9C0G6 4158 aa4.41□□□□□ -1.7
LCA5-201ENST00000369846 ALMS1Q8TCU4 4167 aa4.41□□□□□ -1.7
LCA5-201ENST00000369846 KRTAP13-3Q3SY46 172 aa4.4□□□□□ -1.7
LCA5-201ENST00000369846 KRTAP12-2P59991 146 aa4.39□□□□□ -1.71
LCA5-201ENST00000369846 DNAH2Q9P225 4427 aa4.38□□□□□ -1.71
LCA5-201ENST00000369846 VPS13DQ5THJ4 4388 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms