RNA–Protein interactions for RNA: ENST00000369214.2

PRDM13-201, Transcript of PR/SET domain 13, humanhuman

TSL 5

Gene PRDM13, Length 3,232 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM13-201ENST00000369214 NOTCH2NLQ7Z3S9 236 aa11.06□□□□□ -0.64
PRDM13-201ENST00000369214 RTL8CO15255 209 aa11.05□□□□□ -0.64
PRDM13-201ENST00000369214 PLAC8Q9NZF1 115 aa11.03□□□□□ -0.64
PRDM13-201ENST00000369214 VPS13DQ5THJ4 4388 aa11.02□□□□□ -0.64
PRDM13-201ENST00000369214 DNAH8Q96JB1 4490 aa11.02□□□□□ -0.65
PRDM13-201ENST00000369214 LINC01558Q9Y6Z2 57 aa11.01□□□□□ -0.65
PRDM13-201ENST00000369214 SPTSSBQ8NFR3 76 aa11.01□□□□□ -0.65
PRDM13-201ENST00000369214 A6NED7 52 aa11□□□□□ -0.65
PRDM13-201ENST00000369214 HRES1P13985 223 aa11□□□□□ -0.65
PRDM13-201ENST00000369214 SPAG11AQ6PDA7 123 aa10.99□□□□□ -0.65
PRDM13-201ENST00000369214 LCA10Q71F78 164 aa10.99□□□□□ -0.65
PRDM13-201ENST00000369214 HECTD4Q9Y4D8 3996 aa10.99□□□□□ -0.65
PRDM13-201ENST00000369214 FBN3Q75N90 2809 aa10.96□□□□□ -0.66
PRDM13-201ENST00000369214 SPINK6Q6UWN8 80 aa10.96□□□□□ -0.66
PRDM13-201ENST00000369214 STARD9Q9P2P6 4700 aa10.95□□□□□ -0.66
PRDM13-201ENST00000369214 KRTAP21-3Q3LHN1 58 aa10.94□□□□□ -0.66
PRDM13-201ENST00000369214 FRAS1Q86XX4 4008 aa10.93□□□□□ -0.66
PRDM13-201ENST00000369214 DNAH17Q9UFH2 4485 aa10.93□□□□□ -0.66
PRDM13-201ENST00000369214 Q5W150 140 aa10.93□□□□□ -0.66
PRDM13-201ENST00000369214 ATP11AUNQ6ZP68 121 aa10.93□□□□□ -0.66
PRDM13-201ENST00000369214 KRTAP13-3Q3SY46 172 aa10.92□□□□□ -0.66
PRDM13-201ENST00000369214 MEGF8Q7Z7M0 2845 aa10.92□□□□□ -0.66
PRDM13-201ENST00000369214 CDC42SE1Q9NRR8 79 aa10.92□□□□□ -0.66
PRDM13-201ENST00000369214 IGLV7-43P04211 117 aa10.9□□□□□ -0.66
PRDM13-201ENST00000369214 CIRBP-AS1Q8TBR5 109 aa10.9□□□□□ -0.67
PRDM13-201ENST00000369214 C4orf48Q5BLP8 95 aa10.87□□□□□ -0.67
PRDM13-201ENST00000369214 RBM12B-AS1Q9P1G2 102 aa10.87□□□□□ -0.67
PRDM13-201ENST00000369214 PRKDCP78527 4128 aaKnown RBP10.85□□□□□ -0.67
PRDM13-201ENST00000369214 DNAH2Q9P225 4427 aa10.85□□□□□ -0.67
PRDM13-201ENST00000369214 C8orf87E5RJ46 101 aa10.84□□□□□ -0.67
PRDM13-201ENST00000369214 SSBP3-AS1Q7Z2R9 100 aa10.83□□□□□ -0.68
PRDM13-201ENST00000369214 PRR26Q8N8Z3 221 aa10.82□□□□□ -0.68
PRDM13-201ENST00000369214 SPINK7P58062 85 aa10.82□□□□□ -0.68
PRDM13-201ENST00000369214 KTN1-AS1Q86SY8 53 aa10.81□□□□□ -0.68
PRDM13-201ENST00000369214 A6NN06 94 aa10.8□□□□□ -0.68
PRDM13-201ENST00000369214 ACYP2P14621 99 aa10.79□□□□□ -0.68
PRDM13-201ENST00000369214 KMT2AQ03164 3969 aa10.79□□□□□ -0.68
PRDM13-201ENST00000369214 C1orf134Q5TEV5 83 aa10.79□□□□□ -0.68
PRDM13-201ENST00000369214 LINC00313P59037 77 aa10.75□□□□□ -0.69
PRDM13-201ENST00000369214 ALMS1Q8TCU4 4167 aa10.75□□□□□ -0.69
PRDM13-201ENST00000369214 DMAC1Q96GE9 116 aa10.73□□□□□ -0.69
PRDM13-201ENST00000369214 FAM229AH3BQW9 127 aa10.73□□□□□ -0.69
PRDM13-201ENST00000369214 H3BS24 57 aa10.68□□□□□ -0.7
PRDM13-201ENST00000369214 RETNLBQ9BQ08 111 aa10.67□□□□□ -0.7
PRDM13-201ENST00000369214 IGKV2-30P06310 120 aa10.67□□□□□ -0.7
PRDM13-201ENST00000369214 KRTAP13-2Q52LG2 175 aa10.66□□□□□ -0.7
PRDM13-201ENST00000369214 DNAH11Q96DT5 4516 aa10.65□□□□□ -0.7
PRDM13-201ENST00000369214 LY6G6CO95867 125 aa10.62□□□□□ -0.71
PRDM13-201ENST00000369214 KRTAP10-2P60368 255 aa10.62□□□□□ -0.71
PRDM13-201ENST00000369214 C7orf65Q6ZTY9 151 aa10.62□□□□□ -0.71
PRDM13-201ENST00000369214 KRTAP16-1A8MUX0 517 aa10.61□□□□□ -0.71
PRDM13-201ENST00000369214 DNAH6Q9C0G6 4158 aa10.6□□□□□ -0.71
PRDM13-201ENST00000369214 DNAH5Q8TE73 4624 aa10.6□□□□□ -0.71
PRDM13-201ENST00000369214 A0A1B0GU69 56 aa10.56□□□□□ -0.72
PRDM13-201ENST00000369214 Q6ZSA8 131 aa10.52□□□□□ -0.73
PRDM13-201ENST00000369214 PRAC1Q96KF2 57 aa10.5□□□□□ -0.73
PRDM13-201ENST00000369214 KRTAP1-4P0C5Y4 121 aa10.5□□□□□ -0.73
PRDM13-201ENST00000369214 IGKV2D-30A0A075B6S6 120 aa10.5□□□□□ -0.73
PRDM13-201ENST00000369214 KRTAP10-1P60331 282 aa10.49□□□□□ -0.73
PRDM13-201ENST00000369214 LRP1BQ9NZR2 4599 aa10.47□□□□□ -0.73
PRDM13-201ENST00000369214 SPATA8Q6RVD6 105 aa10.46□□□□□ -0.74
PRDM13-201ENST00000369214 PKD1P98161 4303 aa10.41□□□□□ -0.74
PRDM13-201ENST00000369214 UQCR11O14957 56 aa10.4□□□□□ -0.74
PRDM13-201ENST00000369214 MIR22HGQ0VDD5 57 aa10.39□□□□□ -0.75
PRDM13-201ENST00000369214 PLA2G1BP04054 148 aaKnown RBP10.38□□□□□ -0.75
PRDM13-201ENST00000369214 TYMSOSQ8TAI1 123 aa10.37□□□□□ -0.75
PRDM13-201ENST00000369214 ADM2Q7Z4H4 148 aa10.37□□□□□ -0.75
PRDM13-201ENST00000369214 SPINK1P00995 79 aa10.36□□□□□ -0.75
PRDM13-201ENST00000369214 VPS13BQ7Z7G8 4022 aa10.32□□□□□ -0.76
PRDM13-201ENST00000369214 FAT2Q9NYQ8 4349 aa10.31□□□□□ -0.76
PRDM13-201ENST00000369214 HYDINQ4G0P3 5121 aa10.26□□□□□ -0.77
PRDM13-201ENST00000369214 Q8N1X5 172 aa10.26□□□□□ -0.77
PRDM13-201ENST00000369214 LINC00304Q8N9R0 145 aa10.22□□□□□ -0.77
PRDM13-201ENST00000369214 RPS29P62273 56 aaKnown RBP10.22□□□□□ -0.77
PRDM13-201ENST00000369214 SACSQ9NZJ4 4579 aa10.13□□□□□ -0.79
PRDM13-201ENST00000369214 LINC01554Q52M75 96 aa10.11□□□□□ -0.79
PRDM13-201ENST00000369214 A8MUU9 505 aa10.08□□□□□ -0.8
PRDM13-201ENST00000369214 KMT2CQ8NEZ4 4911 aaKnown RBP10.08□□□□□ -0.8
PRDM13-201ENST00000369214 C20orf166-AS1Q96NR2 134 aa10.08□□□□□ -0.8
PRDM13-201ENST00000369214 C9orf92A6NGG3 77 aa10.07□□□□□ -0.8
PRDM13-201ENST00000369214 KRTAP3-1Q9BYR8 98 aa10.02□□□□□ -0.81
PRDM13-201ENST00000369214 H0YAA0 97 aa10□□□□□ -0.81
PRDM13-201ENST00000369214 SMR3BP02814 79 aaPredicted RBP10□□□□□ -0.81
PRDM13-201ENST00000369214 PKHD1P08F94 4074 aa9.99□□□□□ -0.81
PRDM13-201ENST00000369214 CSAG1Q6PB30 78 aa9.99□□□□□ -0.81
PRDM13-201ENST00000369214 FLG2Q5D862 2391 aaPredicted RBP9.97□□□□□ -0.81
PRDM13-201ENST00000369214 PKHD1L1Q86WI1 4243 aa9.94□□□□□ -0.82
PRDM13-201ENST00000369214 A0A1B0GU33 70 aa9.94□□□□□ -0.82
PRDM13-201ENST00000369214 DYNC1H1Q14204 4646 aaKnown RBP9.92□□□□□ -0.82
PRDM13-201ENST00000369214 H1FX-AS1Q4G0G2 97 aa9.9□□□□□ -0.82
PRDM13-201ENST00000369214 KRTAP10-4P60372 401 aaPredicted RBP9.89□□□□□ -0.83
PRDM13-201ENST00000369214 APOBP04114 4563 aaKnown RBP9.88□□□□□ -0.83
PRDM13-201ENST00000369214 RYR3Q15413 4870 aa9.85□□□□□ -0.83
PRDM13-201ENST00000369214 COX6B2Q6YFQ2 88 aa9.83□□□□□ -0.84
PRDM13-201ENST00000369214 FAT1Q14517 4588 aa9.83□□□□□ -0.84
PRDM13-201ENST00000369214 A0A1B0GVY2 172 aa9.79□□□□□ -0.84
PRDM13-201ENST00000369214 KRTAP25-1Q3LHN0 102 aa9.71□□□□□ -0.85
PRDM13-201ENST00000369214 RYR2Q92736 4967 aa9.69□□□□□ -0.86
PRDM13-201ENST00000369214 K7ERS5 55 aa9.67□□□□□ -0.86
PRDM13-201ENST00000369214 CRIPTQ9P021 101 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms