RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 CDK2AP2O75956 126 aa8.12□□□□□ -1.11
PRKN-205ENST00000366897 TP53AIP1Q9HCN2 124 aa8.11□□□□□ -1.11
PRKN-205ENST00000366897 NBDYA0A0U1RRE5 68 aa8.1□□□□□ -1.11
PRKN-205ENST00000366897 SPINK7P58062 85 aa8.1□□□□□ -1.11
PRKN-205ENST00000366897 Q6ZR54 194 aa8.1□□□□□ -1.11
PRKN-205ENST00000366897 PRR26Q8N8Z3 221 aa8.09□□□□□ -1.11
PRKN-205ENST00000366897 MRPL34Q9BQ48 92 aaKnown RBP8.09□□□□□ -1.11
PRKN-205ENST00000366897 DNAH8Q96JB1 4490 aa8.09□□□□□ -1.11
PRKN-205ENST00000366897 Q6ZRN7 208 aaPredicted RBP8.08□□□□□ -1.12
PRKN-205ENST00000366897 SPACA4Q8TDM5 124 aa8.08□□□□□ -1.12
PRKN-205ENST00000366897 PSORS1C2Q9UIG4 136 aa8.08□□□□□ -1.12
PRKN-205ENST00000366897 Q5W150 140 aa8.08□□□□□ -1.12
PRKN-205ENST00000366897 ATP11AUNQ6ZP68 121 aa8.06□□□□□ -1.12
PRKN-205ENST00000366897 LINC01558Q9Y6Z2 57 aa8.06□□□□□ -1.12
PRKN-205ENST00000366897 KTN1-AS1Q86SY8 53 aa8.06□□□□□ -1.12
PRKN-205ENST00000366897 SACSQ9NZJ4 4579 aa8.05□□□□□ -1.12
PRKN-205ENST00000366897 CDC42SE1Q9NRR8 79 aa8.05□□□□□ -1.12
PRKN-205ENST00000366897 NUPR2A6NF83 97 aa8.04□□□□□ -1.12
PRKN-205ENST00000366897 A6NN06 94 aa8.04□□□□□ -1.12
PRKN-205ENST00000366897 LINC00483Q53H64 154 aa8.04□□□□□ -1.12
PRKN-205ENST00000366897 RETNLBQ9BQ08 111 aa8.04□□□□□ -1.12
PRKN-205ENST00000366897 PLAC8Q9NZF1 115 aa8.02□□□□□ -1.13
PRKN-205ENST00000366897 HYDINQ4G0P3 5121 aa8.02□□□□□ -1.13
PRKN-205ENST00000366897 RYR2Q92736 4967 aa8.02□□□□□ -1.13
PRKN-205ENST00000366897 DYNC2H1Q8NCM8 4307 aaKnown RBP8.02□□□□□ -1.13
PRKN-205ENST00000366897 KMT2AQ03164 3969 aa8.01□□□□□ -1.13
PRKN-205ENST00000366897 CIRBP-AS1Q8TBR5 109 aa8.01□□□□□ -1.13
PRKN-205ENST00000366897 RBM12B-AS1Q9P1G2 102 aa8□□□□□ -1.13
PRKN-205ENST00000366897 IGLV5-52A0A0A0MRZ9 124 aa8□□□□□ -1.13
PRKN-205ENST00000366897 A0A087WTM6 91 aa7.99□□□□□ -1.13
PRKN-205ENST00000366897 RTL8CO15255 209 aa7.98□□□□□ -1.13
PRKN-205ENST00000366897 DNAH17Q9UFH2 4485 aa7.98□□□□□ -1.13
PRKN-205ENST00000366897 HECTD4Q9Y4D8 3996 aa7.98□□□□□ -1.13
PRKN-205ENST00000366897 LY6G6CO95867 125 aa7.97□□□□□ -1.13
PRKN-205ENST00000366897 ZNF706Q9Y5V0 76 aaPredicted RBP7.97□□□□□ -1.13
PRKN-205ENST00000366897 ZNF861PO60384 105 aa7.97□□□□□ -1.13
PRKN-205ENST00000366897 KRTAP13-3Q3SY46 172 aa7.93□□□□□ -1.14
PRKN-205ENST00000366897 DNAH2Q9P225 4427 aa7.92□□□□□ -1.14
PRKN-205ENST00000366897 ALMS1Q8TCU4 4167 aa7.91□□□□□ -1.14
PRKN-205ENST00000366897 VPS13DQ5THJ4 4388 aa7.91□□□□□ -1.14
PRKN-205ENST00000366897 H3BS24 57 aa7.89□□□□□ -1.15
PRKN-205ENST00000366897 C7orf65Q6ZTY9 151 aa7.89□□□□□ -1.15
PRKN-205ENST00000366897 ACYP2P14621 99 aa7.87□□□□□ -1.15
PRKN-205ENST00000366897 PRAC1Q96KF2 57 aa7.87□□□□□ -1.15
PRKN-205ENST00000366897 IGLV7-43P04211 117 aa7.86□□□□□ -1.15
PRKN-205ENST00000366897 EPPK1P58107 5090 aaKnown RBP7.85□□□□□ -1.15
PRKN-205ENST00000366897 DNAH6Q9C0G6 4158 aa7.85□□□□□ -1.15
PRKN-205ENST00000366897 ADM2Q7Z4H4 148 aa7.85□□□□□ -1.15
PRKN-205ENST00000366897 LINC00313P59037 77 aa7.82□□□□□ -1.16
PRKN-205ENST00000366897 DMAC1Q96GE9 116 aa7.81□□□□□ -1.16
PRKN-205ENST00000366897 DNAH11Q96DT5 4516 aa7.8□□□□□ -1.16
PRKN-205ENST00000366897 A0A1B0GU69 56 aa7.8□□□□□ -1.16
PRKN-205ENST00000366897 IGKV2D-30A0A075B6S6 120 aa7.79□□□□□ -1.16
PRKN-205ENST00000366897 IGKV2-30P06310 120 aa7.79□□□□□ -1.16
PRKN-205ENST00000366897 C8orf87E5RJ46 101 aa7.77□□□□□ -1.17
PRKN-205ENST00000366897 FAM229AH3BQW9 127 aa7.76□□□□□ -1.17
PRKN-205ENST00000366897 KRTAP13-2Q52LG2 175 aa7.75□□□□□ -1.17
PRKN-205ENST00000366897 LRP1BQ9NZR2 4599 aa7.73□□□□□ -1.17
PRKN-205ENST00000366897 C1orf134Q5TEV5 83 aa7.73□□□□□ -1.17
PRKN-205ENST00000366897 SSBP3-AS1Q7Z2R9 100 aa7.73□□□□□ -1.17
PRKN-205ENST00000366897 KRTAP10-2P60368 255 aa7.73□□□□□ -1.17
PRKN-205ENST00000366897 DNAH5Q8TE73 4624 aa7.71□□□□□ -1.17
PRKN-205ENST00000366897 SPINK1P00995 79 aa7.7□□□□□ -1.18
PRKN-205ENST00000366897 FAT2Q9NYQ8 4349 aa7.7□□□□□ -1.18
PRKN-205ENST00000366897 BIRC6Q9NR09 4857 aa7.69□□□□□ -1.18
PRKN-205ENST00000366897 KRTAP16-1A8MUX0 517 aa7.69□□□□□ -1.18
PRKN-205ENST00000366897 PKHD1P08F94 4074 aa7.68□□□□□ -1.18
PRKN-205ENST00000366897 MIR22HGQ0VDD5 57 aa7.68□□□□□ -1.18
PRKN-205ENST00000366897 SPATA8Q6RVD6 105 aa7.66□□□□□ -1.18
PRKN-205ENST00000366897 Q8N1X5 172 aa7.65□□□□□ -1.18
PRKN-205ENST00000366897 UQCR11O14957 56 aa7.64□□□□□ -1.19
PRKN-205ENST00000366897 A0A1B0GVY2 172 aa7.63□□□□□ -1.19
PRKN-205ENST00000366897 PKD1P98161 4303 aa7.63□□□□□ -1.19
PRKN-205ENST00000366897 PLA2G1BP04054 148 aaKnown RBP7.61□□□□□ -1.19
PRKN-205ENST00000366897 KRTAP10-1P60331 282 aa7.6□□□□□ -1.19
PRKN-205ENST00000366897 VPS13BQ7Z7G8 4022 aa7.59□□□□□ -1.19
PRKN-205ENST00000366897 KRTAP1-4P0C5Y4 121 aa7.58□□□□□ -1.2
PRKN-205ENST00000366897 KIAA1109Q2LD37 5005 aa7.54□□□□□ -1.2
PRKN-205ENST00000366897 CSAG1Q6PB30 78 aa7.54□□□□□ -1.2
PRKN-205ENST00000366897 LINC01554Q52M75 96 aa7.53□□□□□ -1.2
PRKN-205ENST00000366897 TYMSOSQ8TAI1 123 aa7.51□□□□□ -1.21
PRKN-205ENST00000366897 FLG2Q5D862 2391 aaPredicted RBP7.5□□□□□ -1.21
PRKN-205ENST00000366897 DYNC1H1Q14204 4646 aaKnown RBP7.48□□□□□ -1.21
PRKN-205ENST00000366897 Q6ZSA8 131 aa7.47□□□□□ -1.21
PRKN-205ENST00000366897 HERC2O95714 4834 aa7.46□□□□□ -1.22
PRKN-205ENST00000366897 C9orf92A6NGG3 77 aa7.45□□□□□ -1.22
PRKN-205ENST00000366897 H0YAA0 97 aa7.42□□□□□ -1.22
PRKN-205ENST00000366897 RYR1P21817 5038 aa7.41□□□□□ -1.22
PRKN-205ENST00000366897 HSPG2P98160 4391 aa7.4□□□□□ -1.22
PRKN-205ENST00000366897 APOBP04114 4563 aaKnown RBP7.38□□□□□ -1.23
PRKN-205ENST00000366897 LINC00304Q8N9R0 145 aa7.38□□□□□ -1.23
PRKN-205ENST00000366897 KRTAP17-1Q9BYP8 105 aa7.38□□□□□ -1.23
PRKN-205ENST00000366897 SMR3BP02814 79 aaPredicted RBP7.37□□□□□ -1.23
PRKN-205ENST00000366897 PCLOQ9Y6V0 5065 aa7.36□□□□□ -1.23
PRKN-205ENST00000366897 KRTAP3-1Q9BYR8 98 aa7.36□□□□□ -1.23
PRKN-205ENST00000366897 FAT1Q14517 4588 aa7.35□□□□□ -1.23
PRKN-205ENST00000366897 KRTAP4-5Q9BYR2 181 aa7.34□□□□□ -1.23
PRKN-205ENST00000366897 CRIPTQ9P021 101 aa7.33□□□□□ -1.24
PRKN-205ENST00000366897 A0A1B0GU33 70 aa7.31□□□□□ -1.24
PRKN-205ENST00000366897 A8MUU9 505 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms