RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 CAMK2N1Q7Z7J9 78 aa7.13□□□□□ -1.27
CDC42BPA-203ENST00000366766 EYSQ5T1H1 3165 aa7.12□□□□□ -1.27
CDC42BPA-203ENST00000366766 OXTP01178 125 aa7.1□□□□□ -1.27
CDC42BPA-203ENST00000366766 RPL37P61927 97 aaKnown RBP7.09□□□□□ -1.28
CDC42BPA-203ENST00000366766 R4GN34 69 aa7.05□□□□□ -1.28
CDC42BPA-203ENST00000366766 ROMO1P60602 79 aa7.03□□□□□ -1.28
CDC42BPA-203ENST00000366766 KRTAP10-1P60331 282 aa7.03□□□□□ -1.28
CDC42BPA-203ENST00000366766 H1FX-AS1Q4G0G2 97 aa7.03□□□□□ -1.28
CDC42BPA-203ENST00000366766 TGP01266 2768 aa7.02□□□□□ -1.29
CDC42BPA-203ENST00000366766 VWFP04275 2813 aa7.02□□□□□ -1.29
CDC42BPA-203ENST00000366766 SPATA8Q6RVD6 105 aa7.02□□□□□ -1.29
CDC42BPA-203ENST00000366766 Q6ZRN7 208 aaPredicted RBP7.01□□□□□ -1.29
CDC42BPA-203ENST00000366766 A0A087X002 238 aa7.01□□□□□ -1.29
CDC42BPA-203ENST00000366766 Q5VSD8 79 aa6.99□□□□□ -1.29
CDC42BPA-203ENST00000366766 PANO1I0J062 215 aa6.99□□□□□ -1.29
CDC42BPA-203ENST00000366766 KRTAP10-2P60368 255 aa6.99□□□□□ -1.29
CDC42BPA-203ENST00000366766 KRTAP13-1Q8IUC0 172 aa6.99□□□□□ -1.29
CDC42BPA-203ENST00000366766 LOC400499M0QZD8 3231 aa6.98□□□□□ -1.29
CDC42BPA-203ENST00000366766 CELSR1Q9NYQ6 3014 aa6.98□□□□□ -1.29
CDC42BPA-203ENST00000366766 A0A0A0MQY5 61 aa6.93□□□□□ -1.3
CDC42BPA-203ENST00000366766 PRAC1Q96KF2 57 aa6.93□□□□□ -1.3
CDC42BPA-203ENST00000366766 M0R2T5 61 aa6.91□□□□□ -1.3
CDC42BPA-203ENST00000366766 PKD1L1Q8TDX9 2849 aa6.89□□□□□ -1.31
CDC42BPA-203ENST00000366766 M0QZ58 72 aa6.89□□□□□ -1.31
CDC42BPA-203ENST00000366766 NOTCH2NLQ7Z3S9 236 aa6.89□□□□□ -1.31
CDC42BPA-203ENST00000366766 MYO15AQ9UKN7 3530 aa6.89□□□□□ -1.31
CDC42BPA-203ENST00000366766 KRTAP7-1Q8IUC3 87 aa6.87□□□□□ -1.31
CDC42BPA-203ENST00000366766 KRTAP21-3Q3LHN1 58 aa6.85□□□□□ -1.31
CDC42BPA-203ENST00000366766 A6NN06 94 aa6.85□□□□□ -1.31
CDC42BPA-203ENST00000366766 TENM2Q9NT68 2774 aa6.82□□□□□ -1.32
CDC42BPA-203ENST00000366766 KRTAP11-1Q8IUC1 163 aa6.82□□□□□ -1.32
CDC42BPA-203ENST00000366766 SPEGQ15772 3267 aa6.82□□□□□ -1.32
CDC42BPA-203ENST00000366766 ADM2Q7Z4H4 148 aa6.79□□□□□ -1.32
CDC42BPA-203ENST00000366766 H3BS24 57 aa6.79□□□□□ -1.32
CDC42BPA-203ENST00000366766 FBN1P35555 2871 aaKnown RBP6.78□□□□□ -1.32
CDC42BPA-203ENST00000366766 KRTAP13-2Q52LG2 175 aa6.78□□□□□ -1.32
CDC42BPA-203ENST00000366766 A8MUU9 505 aa6.77□□□□□ -1.33
CDC42BPA-203ENST00000366766 WDFY3Q8IZQ1 3526 aa6.76□□□□□ -1.33
CDC42BPA-203ENST00000366766 C20orf166-AS1Q96NR2 134 aa6.74□□□□□ -1.33
CDC42BPA-203ENST00000366766 KRTAP25-1Q3LHN0 102 aa6.73□□□□□ -1.33
CDC42BPA-203ENST00000366766 PLAC4Q8WY50 150 aa6.72□□□□□ -1.33
CDC42BPA-203ENST00000366766 SRRM2Q9UQ35 2752 aaKnown RBP6.64□□□□□ -1.35
CDC42BPA-203ENST00000366766 LAMA5O15230 3695 aa6.6□□□□□ -1.35
CDC42BPA-203ENST00000366766 PP632Q6XCG6 107 aa6.56□□□□□ -1.36
CDC42BPA-203ENST00000366766 COL7A1Q02388 2944 aa6.56□□□□□ -1.36
CDC42BPA-203ENST00000366766 DCHS1Q96JQ0 3298 aa6.54□□□□□ -1.36
CDC42BPA-203ENST00000366766 OTOGQ6ZRI0 2925 aa6.54□□□□□ -1.36
CDC42BPA-203ENST00000366766 KRTAP1-4P0C5Y4 121 aa6.52□□□□□ -1.36
CDC42BPA-203ENST00000366766 SPENQ96T58 3664 aaKnown RBP6.52□□□□□ -1.37
CDC42BPA-203ENST00000366766 KRTAP16-1A8MUX0 517 aa6.52□□□□□ -1.37
CDC42BPA-203ENST00000366766 A8MU10 97 aa6.51□□□□□ -1.37
CDC42BPA-203ENST00000366766 MEGF8Q7Z7M0 2845 aa6.49□□□□□ -1.37
CDC42BPA-203ENST00000366766 TNP1P09430 55 aa6.48□□□□□ -1.37
CDC42BPA-203ENST00000366766 FBN3Q75N90 2809 aa6.47□□□□□ -1.37
CDC42BPA-203ENST00000366766 RELNP78509 3460 aa6.47□□□□□ -1.37
CDC42BPA-203ENST00000366766 TPRXLQ17RH7 258 aa6.45□□□□□ -1.38
CDC42BPA-203ENST00000366766 DMDP11532 3685 aa6.44□□□□□ -1.38
CDC42BPA-203ENST00000366766 NBPF19A0A087WUL8 3843 aa6.43□□□□□ -1.38
CDC42BPA-203ENST00000366766 ZFHX3Q15911 3703 aa6.42□□□□□ -1.38
CDC42BPA-203ENST00000366766 ZFHX4Q86UP3 3567 aa6.42□□□□□ -1.38
CDC42BPA-203ENST00000366766 XP32Q5T750 250 aa6.41□□□□□ -1.38
CDC42BPA-203ENST00000366766 ASPMQ8IZT6 3477 aa6.38□□□□□ -1.39
CDC42BPA-203ENST00000366766 SMG1Q96Q15 3661 aaKnown RBP6.37□□□□□ -1.39
CDC42BPA-203ENST00000366766 H0YAA0 97 aa6.36□□□□□ -1.39
CDC42BPA-203ENST00000366766 NDUFAF8A1L188 74 aa6.33□□□□□ -1.4
CDC42BPA-203ENST00000366766 KRTAP13-3Q3SY46 172 aa6.32□□□□□ -1.4
CDC42BPA-203ENST00000366766 CSMD1Q96PZ7 3565 aa6.26□□□□□ -1.41
CDC42BPA-203ENST00000366766 TRRAPQ9Y4A5 3859 aa6.25□□□□□ -1.41
CDC42BPA-203ENST00000366766 P0C880 135 aa6.22□□□□□ -1.41
CDC42BPA-203ENST00000366766 MUC3AQ02505 3323 aa6.21□□□□□ -1.41
CDC42BPA-203ENST00000366766 C10orf95Q9H7T3 257 aa6.16□□□□□ -1.42
CDC42BPA-203ENST00000366766 VPS13CQ709C8 3753 aa6.16□□□□□ -1.42
CDC42BPA-203ENST00000366766 PRO2289Q9P1D8 64 aa6.14□□□□□ -1.43
CDC42BPA-203ENST00000366766 SVEP1Q4LDE5 3571 aa6.13□□□□□ -1.43
CDC42BPA-203ENST00000366766 KRTAP10-8P60410 259 aa6.12□□□□□ -1.43
CDC42BPA-203ENST00000366766 A0A1B0GVY2 172 aa6.09□□□□□ -1.43
CDC42BPA-203ENST00000366766 BSNQ9UPA5 3926 aa6.07□□□□□ -1.44
CDC42BPA-203ENST00000366766 AKAP9Q99996 3911 aa6.03□□□□□ -1.44
CDC42BPA-203ENST00000366766 CUBNO60494 3623 aa5.99□□□□□ -1.45
CDC42BPA-203ENST00000366766 KRTAP13-4Q3LI77 160 aa5.95□□□□□ -1.46
CDC42BPA-203ENST00000366766 KRTAP10-10P60014 251 aa5.94□□□□□ -1.46
CDC42BPA-203ENST00000366766 KRTAP12-2P59991 146 aa5.87□□□□□ -1.47
CDC42BPA-203ENST00000366766 KRTAP12-1P59990 96 aa5.87□□□□□ -1.47
CDC42BPA-203ENST00000366766 KRTAP3-1Q9BYR8 98 aa5.82□□□□□ -1.48
CDC42BPA-203ENST00000366766 CSMD2Q7Z408 3487 aa5.77□□□□□ -1.49
CDC42BPA-203ENST00000366766 KRTAP10-6P60371 365 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-203ENST00000366766 ZNF469Q96JG9 3925 aaPredicted RBP5.71□□□□□ -1.49
CDC42BPA-203ENST00000366766 CSMD3Q7Z407 3707 aa5.59□□□□□ -1.51
CDC42BPA-203ENST00000366766 KRTAP23-1A1A580 65 aa5.59□□□□□ -1.51
CDC42BPA-203ENST00000366766 ANK3Q12955 4377 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-203ENST00000366766 MT1HL1P0DM35 61 aa5.54□□□□□ -1.52
CDC42BPA-203ENST00000366766 KRTAP3-2Q9BYR7 98 aa5.53□□□□□ -1.52
CDC42BPA-203ENST00000366766 KRTAP3-3Q9BYR6 98 aa5.52□□□□□ -1.53
CDC42BPA-203ENST00000366766 KRTAP10-4P60372 401 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-203ENST00000366766 INE1O15225 51 aa5.48□□□□□ -1.53
CDC42BPA-203ENST00000366766 KRTAP15-1Q3LI76 137 aa5.46□□□□□ -1.54
CDC42BPA-203ENST00000366766 ALMS1Q8TCU4 4167 aa5.43□□□□□ -1.54
CDC42BPA-203ENST00000366766 HECTD4Q9Y4D8 3996 aa5.35□□□□□ -1.55
CDC42BPA-203ENST00000366766 KRTAP10-12P60413 245 aa5.35□□□□□ -1.55
CDC42BPA-203ENST00000366766 LYSTQ99698 3801 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 310 ms