RNA–Protein interactions for RNA: ENST00000360779.3

SDCBP2-202, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-202ENST00000360779 DEFB116Q30KQ4 102 aa9.58□□□□□ -0.88
SDCBP2-202ENST00000360779 BPY2O14599 106 aa9.57□□□□□ -0.88
SDCBP2-202ENST00000360779 KLKP1Q107X0 134 aa9.57□□□□□ -0.88
SDCBP2-202ENST00000360779 HERC2O95714 4834 aa9.56□□□□□ -0.88
SDCBP2-202ENST00000360779 SMIM26A0A096LP01 95 aa9.56□□□□□ -0.88
SDCBP2-202ENST00000360779 RPS29P62273 56 aaKnown RBP9.54□□□□□ -0.88
SDCBP2-202ENST00000360779 IGKV4-1P06312 121 aa9.53□□□□□ -0.88
SDCBP2-202ENST00000360779 C20orf197Q8N268 126 aa9.53□□□□□ -0.88
SDCBP2-202ENST00000360779 H7BZZ5 65 aa9.51□□□□□ -0.89
SDCBP2-202ENST00000360779 LINC00472Q9H8W2 130 aa9.51□□□□□ -0.89
SDCBP2-202ENST00000360779 J3QL48 77 aa9.51□□□□□ -0.89
SDCBP2-202ENST00000360779 ASB16-AS1Q495Z4 193 aa9.51□□□□□ -0.89
SDCBP2-202ENST00000360779 KRTAP29-1A8MX34 341 aaPredicted RBP9.5□□□□□ -0.89
SDCBP2-202ENST00000360779 MT1HL1P0DM35 61 aa9.5□□□□□ -0.89
SDCBP2-202ENST00000360779 CXCL6P80162 114 aa9.5□□□□□ -0.89
SDCBP2-202ENST00000360779 FLG2Q5D862 2391 aaPredicted RBP9.49□□□□□ -0.89
SDCBP2-202ENST00000360779 Q96NJ1 140 aa9.48□□□□□ -0.89
SDCBP2-202ENST00000360779 FAT3Q8TDW7 4589 aa9.48□□□□□ -0.89
SDCBP2-202ENST00000360779 C1orf195Q5TG92 126 aa9.47□□□□□ -0.89
SDCBP2-202ENST00000360779 NDUFB1O75438 58 aa9.46□□□□□ -0.89
SDCBP2-202ENST00000360779 LRP1Q07954 4544 aaKnown RBP9.46□□□□□ -0.89
SDCBP2-202ENST00000360779 Q8N9L7 120 aa9.45□□□□□ -0.9
SDCBP2-202ENST00000360779 RETNLBQ9BQ08 111 aa9.44□□□□□ -0.9
SDCBP2-202ENST00000360779 DSCR10P59022 87 aa9.43□□□□□ -0.9
SDCBP2-202ENST00000360779 A8MWP4 228 aa9.42□□□□□ -0.9
SDCBP2-202ENST00000360779 ABCA13Q86UQ4 5058 aa9.42□□□□□ -0.9
SDCBP2-202ENST00000360779 K7EQZ3 153 aa9.41□□□□□ -0.9
SDCBP2-202ENST00000360779 MYCBP2O75592 4640 aa9.41□□□□□ -0.9
SDCBP2-202ENST00000360779 IGHV6-1A0A0B4J1U7 121 aa9.41□□□□□ -0.9
SDCBP2-202ENST00000360779 A0A1B0GVX0 72 aa9.37□□□□□ -0.91
SDCBP2-202ENST00000360779 TNXBP22105 4242 aa9.37□□□□□ -0.91
SDCBP2-202ENST00000360779 FP248Q71RG6 208 aaPredicted RBP9.36□□□□□ -0.91
SDCBP2-202ENST00000360779 PRR15Q8IV56 129 aa9.36□□□□□ -0.91
SDCBP2-202ENST00000360779 PRR4Q16378 134 aa9.31□□□□□ -0.92
SDCBP2-202ENST00000360779 WFDC13Q8IUB5 93 aa9.31□□□□□ -0.92
SDCBP2-202ENST00000360779 HCG22E2RYF7 251 aa9.3□□□□□ -0.92
SDCBP2-202ENST00000360779 C8orf87E5RJ46 101 aa9.3□□□□□ -0.92
SDCBP2-202ENST00000360779 C8orf17Q9NRJ1 99 aa9.3□□□□□ -0.92
SDCBP2-202ENST00000360779 SNURFQ9Y675 71 aa9.3□□□□□ -0.92
SDCBP2-202ENST00000360779 LINC00313P59037 77 aa9.29□□□□□ -0.92
SDCBP2-202ENST00000360779 TMEM254Q8TBM7 123 aa9.29□□□□□ -0.92
SDCBP2-202ENST00000360779 CASC2Q6XLA1 102 aa9.27□□□□□ -0.93
SDCBP2-202ENST00000360779 IGLV7-46A0A075B6I9 117 aa9.26□□□□□ -0.93
SDCBP2-202ENST00000360779 MMP24-AS1A0A0U1RRL7 71 aa9.26□□□□□ -0.93
SDCBP2-202ENST00000360779 hDV103S1A0JD37 113 aa9.26□□□□□ -0.93
SDCBP2-202ENST00000360779 C9orf92A6NGG3 77 aa9.26□□□□□ -0.93
SDCBP2-202ENST00000360779 V9GYY9 64 aa9.26□□□□□ -0.93
SDCBP2-202ENST00000360779 NOTCH2NLQ7Z3S9 236 aa9.25□□□□□ -0.93
SDCBP2-202ENST00000360779 A0A0U1RQV1 116 aa9.24□□□□□ -0.93
SDCBP2-202ENST00000360779 DMBT1Q9UGM3 2413 aaPredicted RBP9.23□□□□□ -0.93
SDCBP2-202ENST00000360779 BRK1Q8WUW1 75 aa9.22□□□□□ -0.93
SDCBP2-202ENST00000360779 PCLOQ9Y6V0 5065 aa9.21□□□□□ -0.93
SDCBP2-202ENST00000360779 NDUFS5O43920 106 aa9.2□□□□□ -0.94
SDCBP2-202ENST00000360779 OCR1Q9BZK8 76 aa9.2□□□□□ -0.94
SDCBP2-202ENST00000360779 MRPL34Q9BQ48 92 aaKnown RBP9.19□□□□□ -0.94
SDCBP2-202ENST00000360779 SEC61GP60059 68 aa9.15□□□□□ -0.95
SDCBP2-202ENST00000360779 Q1T7F1 81 aa9.13□□□□□ -0.95
SDCBP2-202ENST00000360779 KRTAP16-1A8MUX0 517 aa9.11□□□□□ -0.95
SDCBP2-202ENST00000360779 KRTAP13-3Q3SY46 172 aa9.1□□□□□ -0.95
SDCBP2-202ENST00000360779 MPLKIPQ8TAP9 179 aa9.08□□□□□ -0.96
SDCBP2-202ENST00000360779 TPRXLQ17RH7 258 aa9.07□□□□□ -0.96
SDCBP2-202ENST00000360779 Q8N9P0 234 aaPredicted RBP9.05□□□□□ -0.96
SDCBP2-202ENST00000360779 TP53AIP1Q9HCN2 124 aa9.05□□□□□ -0.96
SDCBP2-202ENST00000360779 CYP4F30PQ9H0H9 118 aa9.05□□□□□ -0.96
SDCBP2-202ENST00000360779 PMAIP1Q13794 54 aa9.03□□□□□ -0.96
SDCBP2-202ENST00000360779 XP32Q5T750 250 aa9.03□□□□□ -0.96
SDCBP2-202ENST00000360779 ZCCHC13Q8WW36 166 aaKnown RBP9.02□□□□□ -0.97
SDCBP2-202ENST00000360779 C20orf166-AS1Q96NR2 134 aa9.02□□□□□ -0.97
SDCBP2-202ENST00000360779 A8MUU9 505 aa9□□□□□ -0.97
SDCBP2-202ENST00000360779 Q75L30 129 aa8.99□□□□□ -0.97
SDCBP2-202ENST00000360779 H0Y9P7 68 aa8.96□□□□□ -0.97
SDCBP2-202ENST00000360779 C1orf64Q8NEQ6 169 aa8.96□□□□□ -0.97
SDCBP2-202ENST00000360779 TRAV22A0A0B4J277 110 aa8.95□□□□□ -0.98
SDCBP2-202ENST00000360779 MP68P56378 58 aa8.95□□□□□ -0.98
SDCBP2-202ENST00000360779 RPL37P61927 97 aaKnown RBP8.95□□□□□ -0.98
SDCBP2-202ENST00000360779 ATP11AUNQ6ZP68 121 aa8.95□□□□□ -0.98
SDCBP2-202ENST00000360779 Q5W150 140 aa8.92□□□□□ -0.98
SDCBP2-202ENST00000360779 H3BPC8 53 aa8.9□□□□□ -0.98
SDCBP2-202ENST00000360779 SPANXA2-OT1Q8N9U9 137 aa8.89□□□□□ -0.99
SDCBP2-202ENST00000360779 LINC00208Q96KT6 92 aa8.89□□□□□ -0.99
SDCBP2-202ENST00000360779 HERC1Q15751 4861 aa8.86□□□□□ -0.99
SDCBP2-202ENST00000360779 PCOTHQ58A44 107 aa8.85□□□□□ -0.99
SDCBP2-202ENST00000360779 IGKV2D-30A0A075B6S6 120 aa8.84□□□□□ -0.99
SDCBP2-202ENST00000360779 IGKV2-30P06310 120 aa8.84□□□□□ -0.99
SDCBP2-202ENST00000360779 SEC61BP60468 96 aaKnown RBP8.84□□□□□ -0.99
SDCBP2-202ENST00000360779 LPAP08519 4548 aa8.81□□□□□ -1
SDCBP2-202ENST00000360779 LOC101927531A0A1B0GV80 90 aa8.81□□□□□ -1
SDCBP2-202ENST00000360779 PSPHP1O15172 72 aa8.8□□□□□ -1
SDCBP2-202ENST00000360779 Q5VV11 94 aa8.78□□□□□ -1
SDCBP2-202ENST00000360779 C7orf65Q6ZTY9 151 aa8.78□□□□□ -1
SDCBP2-202ENST00000360779 A8MUN3 132 aa8.76□□□□□ -1.01
SDCBP2-202ENST00000360779 KTN1-AS1Q86SY8 53 aa8.76□□□□□ -1.01
SDCBP2-202ENST00000360779 HMCN2Q8NDA2 5059 aa8.75□□□□□ -1.01
SDCBP2-202ENST00000360779 SPINK7P58062 85 aa8.74□□□□□ -1.01
SDCBP2-202ENST00000360779 CHKB-CPT1BH3BT56 60 aa8.7□□□□□ -1.02
SDCBP2-202ENST00000360779 LRP2P98164 4655 aa8.69□□□□□ -1.02
SDCBP2-202ENST00000360779 PRR15LQ9BU68 103 aa8.64□□□□□ -1.03
SDCBP2-202ENST00000360779 CDC42SE1Q9NRR8 79 aa8.64□□□□□ -1.03
SDCBP2-202ENST00000360779 HRES1P13985 223 aa8.61□□□□□ -1.03
SDCBP2-202ENST00000360779 A6NN06 94 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms