RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 TGP01266 2768 aa4.39□□□□□ -1.71
CLCN3-202ENST00000360642 A8MWP4 228 aa4.39□□□□□ -1.71
CLCN3-202ENST00000360642 LINC00483Q53H64 154 aa4.39□□□□□ -1.71
CLCN3-202ENST00000360642 KRTAP16-1A8MUX0 517 aa4.38□□□□□ -1.71
CLCN3-202ENST00000360642 Q6ZR54 194 aa4.38□□□□□ -1.71
CLCN3-202ENST00000360642 WFDC13Q8IUB5 93 aa4.38□□□□□ -1.71
CLCN3-202ENST00000360642 MEGF8Q7Z7M0 2845 aa4.38□□□□□ -1.71
CLCN3-202ENST00000360642 HRCT1Q6UXD1 115 aa4.38□□□□□ -1.71
CLCN3-202ENST00000360642 DNAH17Q9UFH2 4485 aa4.38□□□□□ -1.71
CLCN3-202ENST00000360642 RTL8CO15255 209 aa4.37□□□□□ -1.71
CLCN3-202ENST00000360642 DNAH8Q96JB1 4490 aa4.37□□□□□ -1.71
CLCN3-202ENST00000360642 FAM229BQ4G0N7 80 aa4.36□□□□□ -1.71
CLCN3-202ENST00000360642 Q96NJ1 140 aa4.36□□□□□ -1.71
CLCN3-202ENST00000360642 PLAC8Q9NZF1 115 aa4.36□□□□□ -1.71
CLCN3-202ENST00000360642 CASC2Q6XLA1 102 aa4.36□□□□□ -1.71
CLCN3-202ENST00000360642 PSORS1C2Q9UIG4 136 aa4.36□□□□□ -1.71
CLCN3-202ENST00000360642 ANAPC11Q9NYG5 84 aa4.35□□□□□ -1.71
CLCN3-202ENST00000360642 PRR4Q16378 134 aa4.34□□□□□ -1.71
CLCN3-202ENST00000360642 hDV103S1A0JD37 113 aa4.34□□□□□ -1.71
CLCN3-202ENST00000360642 MMP24-AS1A0A0U1RRL7 71 aa4.34□□□□□ -1.72
CLCN3-202ENST00000360642 MP68P56378 58 aa4.34□□□□□ -1.72
CLCN3-202ENST00000360642 ASB16-AS1Q495Z4 193 aa4.34□□□□□ -1.72
CLCN3-202ENST00000360642 ZNF706Q9Y5V0 76 aaPredicted RBP4.34□□□□□ -1.72
CLCN3-202ENST00000360642 TRAV22A0A0B4J277 110 aa4.33□□□□□ -1.72
CLCN3-202ENST00000360642 ZNF861PO60384 105 aa4.33□□□□□ -1.72
CLCN3-202ENST00000360642 NDUFB1O75438 58 aa4.33□□□□□ -1.72
CLCN3-202ENST00000360642 CYP4F30PQ9H0H9 118 aa4.33□□□□□ -1.72
CLCN3-202ENST00000360642 DNAH6Q9C0G6 4158 aa4.33□□□□□ -1.72
CLCN3-202ENST00000360642 H3BPC8 53 aa4.33□□□□□ -1.72
CLCN3-202ENST00000360642 MOBPQ13875 183 aa4.33□□□□□ -1.72
CLCN3-202ENST00000360642 FBN3Q75N90 2809 aa4.33□□□□□ -1.72
CLCN3-202ENST00000360642 C1orf64Q8NEQ6 169 aa4.33□□□□□ -1.72
CLCN3-202ENST00000360642 LINC00208Q96KT6 92 aa4.32□□□□□ -1.72
CLCN3-202ENST00000360642 ALMS1Q8TCU4 4167 aa4.32□□□□□ -1.72
CLCN3-202ENST00000360642 H0Y9P7 68 aa4.31□□□□□ -1.72
CLCN3-202ENST00000360642 C1orf134Q5TEV5 83 aa4.31□□□□□ -1.72
CLCN3-202ENST00000360642 HYDINQ4G0P3 5121 aa4.31□□□□□ -1.72
CLCN3-202ENST00000360642 DNAH11Q96DT5 4516 aa4.3□□□□□ -1.72
CLCN3-202ENST00000360642 SPANXA2-OT1Q8N9U9 137 aa4.29□□□□□ -1.72
CLCN3-202ENST00000360642 DNAH5Q8TE73 4624 aa4.29□□□□□ -1.72
CLCN3-202ENST00000360642 IGLV7-43P04211 117 aa4.29□□□□□ -1.72
CLCN3-202ENST00000360642 C8orf17Q9NRJ1 99 aa4.29□□□□□ -1.72
CLCN3-202ENST00000360642 LCE1DQ5T752 114 aa4.28□□□□□ -1.72
CLCN3-202ENST00000360642 A0A1B0GVX0 72 aa4.28□□□□□ -1.72
CLCN3-202ENST00000360642 TP53AIP1Q9HCN2 124 aa4.27□□□□□ -1.73
CLCN3-202ENST00000360642 Q1T7F1 81 aa4.27□□□□□ -1.73
CLCN3-202ENST00000360642 LY6G6CO95867 125 aa4.26□□□□□ -1.73
CLCN3-202ENST00000360642 IGHV6-1A0A0B4J1U7 121 aa4.25□□□□□ -1.73
CLCN3-202ENST00000360642 LRP1BQ9NZR2 4599 aa4.25□□□□□ -1.73
CLCN3-202ENST00000360642 CIRBP-AS1Q8TBR5 109 aa4.25□□□□□ -1.73
CLCN3-202ENST00000360642 PRO0628Q9UI54 55 aa4.25□□□□□ -1.73
CLCN3-202ENST00000360642 CD164Q04900 197 aa4.24□□□□□ -1.73
CLCN3-202ENST00000360642 PKD1P98161 4303 aa4.24□□□□□ -1.73
CLCN3-202ENST00000360642 MRPL34Q9BQ48 92 aaKnown RBP4.24□□□□□ -1.73
CLCN3-202ENST00000360642 FAT2Q9NYQ8 4349 aa4.23□□□□□ -1.73
CLCN3-202ENST00000360642 KRTAP4-8A0A0G2JLE6 195 aa4.23□□□□□ -1.73
CLCN3-202ENST00000360642 SSBP3-AS1Q7Z2R9 100 aa4.23□□□□□ -1.73
CLCN3-202ENST00000360642 Q6ZSA8 131 aa4.22□□□□□ -1.73
CLCN3-202ENST00000360642 SPINK6Q6UWN8 80 aa4.21□□□□□ -1.73
CLCN3-202ENST00000360642 NDUFS5O43920 106 aa4.2□□□□□ -1.74
CLCN3-202ENST00000360642 KRTAP10-1P60331 282 aa4.19□□□□□ -1.74
CLCN3-202ENST00000360642 KRTAP13-3Q3SY46 172 aa4.19□□□□□ -1.74
CLCN3-202ENST00000360642 BRK1Q8WUW1 75 aa4.19□□□□□ -1.74
CLCN3-202ENST00000360642 PCOTHQ58A44 107 aa4.19□□□□□ -1.74
CLCN3-202ENST00000360642 KRTAP13-2Q52LG2 175 aa4.18□□□□□ -1.74
CLCN3-202ENST00000360642 VPS13BQ7Z7G8 4022 aa4.18□□□□□ -1.74
CLCN3-202ENST00000360642 Q5W150 140 aa4.17□□□□□ -1.74
CLCN3-202ENST00000360642 COA5Q86WW8 74 aa4.17□□□□□ -1.74
CLCN3-202ENST00000360642 C8orf87E5RJ46 101 aa4.17□□□□□ -1.74
CLCN3-202ENST00000360642 PSPHP1O15172 72 aa4.17□□□□□ -1.74
CLCN3-202ENST00000360642 LCE1AQ5T7P2 110 aa4.17□□□□□ -1.74
CLCN3-202ENST00000360642 C1orf195Q5TG92 126 aa4.17□□□□□ -1.74
CLCN3-202ENST00000360642 LOC101927531A0A1B0GV80 90 aa4.16□□□□□ -1.74
CLCN3-202ENST00000360642 A8MUN3 132 aa4.16□□□□□ -1.74
CLCN3-202ENST00000360642 KRTAP1-4P0C5Y4 121 aa4.16□□□□□ -1.74
CLCN3-202ENST00000360642 PKHD1P08F94 4074 aa4.16□□□□□ -1.74
CLCN3-202ENST00000360642 LIMD2Q9BT23 127 aa4.15□□□□□ -1.74
CLCN3-202ENST00000360642 Q5VV11 94 aa4.15□□□□□ -1.75
CLCN3-202ENST00000360642 RETNLBQ9BQ08 111 aa4.15□□□□□ -1.75
CLCN3-202ENST00000360642 LINC00313P59037 77 aa4.14□□□□□ -1.75
CLCN3-202ENST00000360642 HRES1P13985 223 aa4.13□□□□□ -1.75
CLCN3-202ENST00000360642 A8MU10 97 aa4.12□□□□□ -1.75
CLCN3-202ENST00000360642 RBM12B-AS1Q9P1G2 102 aa4.12□□□□□ -1.75
CLCN3-202ENST00000360642 SACSQ9NZJ4 4579 aa4.11□□□□□ -1.75
CLCN3-202ENST00000360642 FAT1Q14517 4588 aa4.11□□□□□ -1.75
CLCN3-202ENST00000360642 KRTAP21-3Q3LHN1 58 aa4.1□□□□□ -1.75
CLCN3-202ENST00000360642 PRR15LQ9BU68 103 aa4.1□□□□□ -1.75
CLCN3-202ENST00000360642 LINC01558Q9Y6Z2 57 aa4.1□□□□□ -1.75
CLCN3-202ENST00000360642 CHKB-CPT1BH3BT56 60 aa4.08□□□□□ -1.76
CLCN3-202ENST00000360642 SPAG11AQ6PDA7 123 aa4.08□□□□□ -1.76
CLCN3-202ENST00000360642 SPINK1P00995 79 aa4.07□□□□□ -1.76
CLCN3-202ENST00000360642 DMAC1Q96GE9 116 aa4.07□□□□□ -1.76
CLCN3-202ENST00000360642 DYNC1H1Q14204 4646 aaKnown RBP4.07□□□□□ -1.76
CLCN3-202ENST00000360642 ACYP2P14621 99 aa4.06□□□□□ -1.76
CLCN3-202ENST00000360642 KRTAP4-11Q9BYQ6 195 aa4.06□□□□□ -1.76
CLCN3-202ENST00000360642 SMR3BP02814 79 aaPredicted RBP4.05□□□□□ -1.76
CLCN3-202ENST00000360642 LCE1FQ5T754 118 aa4.04□□□□□ -1.76
CLCN3-202ENST00000360642 RPS29P62273 56 aaKnown RBP4.04□□□□□ -1.76
CLCN3-202ENST00000360642 LCA10Q71F78 164 aa4.04□□□□□ -1.76
CLCN3-202ENST00000360642 KRTAP4-9Q9BYQ8 210 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms