RNA–Protein interactions for RNA: ENST00000360016.9

BRD4-202, Transcript of bromodomain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BRD4, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4-202ENST00000360016 FAT2Q9NYQ8 4349 aa12.08□□□□□ -0.48
BRD4-202ENST00000360016 A8MWP4 228 aa12.07□□□□□ -0.48
BRD4-202ENST00000360016 PRR15Q8IV56 129 aa12.07□□□□□ -0.48
BRD4-202ENST00000360016 RETNLBQ9BQ08 111 aa12.07□□□□□ -0.48
BRD4-202ENST00000360016 SPAG11AQ6PDA7 123 aa12.05□□□□□ -0.48
BRD4-202ENST00000360016 IGHV6-1A0A0B4J1U7 121 aa12.03□□□□□ -0.48
BRD4-202ENST00000360016 Q96NJ1 140 aa12.03□□□□□ -0.48
BRD4-202ENST00000360016 LCE6AA0A183 80 aa12.01□□□□□ -0.49
BRD4-202ENST00000360016 A6NED7 52 aa12.01□□□□□ -0.49
BRD4-202ENST00000360016 KRTAP29-1A8MX34 341 aaPredicted RBP12.01□□□□□ -0.49
BRD4-202ENST00000360016 NDUFB1O75438 58 aa11.97□□□□□ -0.49
BRD4-202ENST00000360016 ZCCHC13Q8WW36 166 aaKnown RBP11.96□□□□□ -0.49
BRD4-202ENST00000360016 LRP1BQ9NZR2 4599 aa11.92□□□□□ -0.5
BRD4-202ENST00000360016 MMP24-AS1A0A0U1RRL7 71 aa11.92□□□□□ -0.5
BRD4-202ENST00000360016 Q1T7F1 81 aa11.92□□□□□ -0.5
BRD4-202ENST00000360016 SSBP3-AS1Q7Z2R9 100 aa11.91□□□□□ -0.5
BRD4-202ENST00000360016 Q5VV11 94 aa11.9□□□□□ -0.5
BRD4-202ENST00000360016 SACSQ9NZJ4 4579 aa11.89□□□□□ -0.51
BRD4-202ENST00000360016 COA5Q86WW8 74 aa11.88□□□□□ -0.51
BRD4-202ENST00000360016 CD164Q04900 197 aa11.88□□□□□ -0.51
BRD4-202ENST00000360016 A0A087X002 238 aa11.86□□□□□ -0.51
BRD4-202ENST00000360016 NOTCH2NLQ7Z3S9 236 aa11.86□□□□□ -0.51
BRD4-202ENST00000360016 A0A1B0GVX0 72 aa11.84□□□□□ -0.51
BRD4-202ENST00000360016 CDK2AP2O75956 126 aa11.84□□□□□ -0.51
BRD4-202ENST00000360016 Q8N9P0 234 aaPredicted RBP11.84□□□□□ -0.51
BRD4-202ENST00000360016 C8orf17Q9NRJ1 99 aa11.84□□□□□ -0.51
BRD4-202ENST00000360016 ASB16-AS1Q495Z4 193 aa11.82□□□□□ -0.52
BRD4-202ENST00000360016 KRTAP13-2Q52LG2 175 aa11.82□□□□□ -0.52
BRD4-202ENST00000360016 PRR26Q8N8Z3 221 aa11.8□□□□□ -0.52
BRD4-202ENST00000360016 RBM12B-AS1Q9P1G2 102 aa11.8□□□□□ -0.52
BRD4-202ENST00000360016 VPS13BQ7Z7G8 4022 aa11.78□□□□□ -0.52
BRD4-202ENST00000360016 KRTAP1-4P0C5Y4 121 aa11.78□□□□□ -0.52
BRD4-202ENST00000360016 LCA10Q71F78 164 aa11.75□□□□□ -0.53
BRD4-202ENST00000360016 PKHD1P08F94 4074 aa11.75□□□□□ -0.53
BRD4-202ENST00000360016 CYP4F30PQ9H0H9 118 aa11.75□□□□□ -0.53
BRD4-202ENST00000360016 H3BPC8 53 aa11.73□□□□□ -0.53
BRD4-202ENST00000360016 TP53AIP1Q9HCN2 124 aa11.71□□□□□ -0.53
BRD4-202ENST00000360016 A0A1B0GVY2 172 aa11.7□□□□□ -0.54
BRD4-202ENST00000360016 MRPL34Q9BQ48 92 aaKnown RBP11.7□□□□□ -0.54
BRD4-202ENST00000360016 SPINK7P58062 85 aa11.7□□□□□ -0.54
BRD4-202ENST00000360016 KTN1-AS1Q86SY8 53 aa11.7□□□□□ -0.54
BRD4-202ENST00000360016 PLA2G1BP04054 148 aaKnown RBP11.68□□□□□ -0.54
BRD4-202ENST00000360016 DYNC1H1Q14204 4646 aaKnown RBP11.64□□□□□ -0.55
BRD4-202ENST00000360016 LIMD2Q9BT23 127 aa11.64□□□□□ -0.55
BRD4-202ENST00000360016 SMR3BP02814 79 aaPredicted RBP11.62□□□□□ -0.55
BRD4-202ENST00000360016 TYMSOSQ8TAI1 123 aa11.61□□□□□ -0.55
BRD4-202ENST00000360016 C8orf87E5RJ46 101 aa11.6□□□□□ -0.55
BRD4-202ENST00000360016 HRES1P13985 223 aa11.6□□□□□ -0.55
BRD4-202ENST00000360016 PRAC1Q96KF2 57 aa11.6□□□□□ -0.55
BRD4-202ENST00000360016 FLG2Q5D862 2391 aaPredicted RBP11.59□□□□□ -0.55
BRD4-202ENST00000360016 DMBT1Q9UGM3 2413 aaPredicted RBP11.59□□□□□ -0.55
BRD4-202ENST00000360016 Q5W150 140 aa11.59□□□□□ -0.55
BRD4-202ENST00000360016 RYR2Q92736 4967 aa11.58□□□□□ -0.56
BRD4-202ENST00000360016 C4orf48Q5BLP8 95 aa11.57□□□□□ -0.56
BRD4-202ENST00000360016 LOC101927531A0A1B0GV80 90 aa11.55□□□□□ -0.56
BRD4-202ENST00000360016 SPINK1P00995 79 aa11.55□□□□□ -0.56
BRD4-202ENST00000360016 SPANXA2-OT1Q8N9U9 137 aa11.54□□□□□ -0.56
BRD4-202ENST00000360016 IGLV7-46A0A075B6I9 117 aa11.54□□□□□ -0.56
BRD4-202ENST00000360016 LINC00313P59037 77 aa11.54□□□□□ -0.56
BRD4-202ENST00000360016 ATP11AUNQ6ZP68 121 aa11.51□□□□□ -0.57
BRD4-202ENST00000360016 ADM2Q7Z4H4 148 aa11.51□□□□□ -0.57
BRD4-202ENST00000360016 APOBP04114 4563 aaKnown RBP11.51□□□□□ -0.57
BRD4-202ENST00000360016 KRTAP10-4P60372 401 aaPredicted RBP11.48□□□□□ -0.57
BRD4-202ENST00000360016 KMT2CQ8NEZ4 4911 aaKnown RBP11.47□□□□□ -0.57
BRD4-202ENST00000360016 IGKV2D-30A0A075B6S6 120 aa11.47□□□□□ -0.57
BRD4-202ENST00000360016 IGKV2-30P06310 120 aa11.47□□□□□ -0.57
BRD4-202ENST00000360016 A6NN06 94 aa11.46□□□□□ -0.58
BRD4-202ENST00000360016 LINC00304Q8N9R0 145 aa11.46□□□□□ -0.58
BRD4-202ENST00000360016 KRTAP13-3Q3SY46 172 aa11.45□□□□□ -0.58
BRD4-202ENST00000360016 Q75L30 129 aa11.42□□□□□ -0.58
BRD4-202ENST00000360016 FAT1Q14517 4588 aa11.42□□□□□ -0.58
BRD4-202ENST00000360016 KRTAP16-1A8MUX0 517 aa11.41□□□□□ -0.58
BRD4-202ENST00000360016 RPS29P62273 56 aaKnown RBP11.41□□□□□ -0.58
BRD4-202ENST00000360016 C7orf65Q6ZTY9 151 aa11.4□□□□□ -0.58
BRD4-202ENST00000360016 CDC42SE1Q9NRR8 79 aa11.39□□□□□ -0.59
BRD4-202ENST00000360016 FAM229AH3BQW9 127 aa11.35□□□□□ -0.59
BRD4-202ENST00000360016 LINC01558Q9Y6Z2 57 aa11.31□□□□□ -0.6
BRD4-202ENST00000360016 PKHD1L1Q86WI1 4243 aa11.28□□□□□ -0.6
BRD4-202ENST00000360016 A0A1B0GU69 56 aa11.28□□□□□ -0.6
BRD4-202ENST00000360016 Q8N1X5 172 aa11.26□□□□□ -0.61
BRD4-202ENST00000360016 ACYP2P14621 99 aa11.22□□□□□ -0.61
BRD4-202ENST00000360016 H3BS24 57 aa11.21□□□□□ -0.62
BRD4-202ENST00000360016 RYR3Q15413 4870 aa11.16□□□□□ -0.62
BRD4-202ENST00000360016 Q5VSD8 79 aa11.13□□□□□ -0.63
BRD4-202ENST00000360016 HSPG2P98160 4391 aa11.11□□□□□ -0.63
BRD4-202ENST00000360016 C9orf92A6NGG3 77 aa11.1□□□□□ -0.63
BRD4-202ENST00000360016 CRIPTQ9P021 101 aa11.1□□□□□ -0.63
BRD4-202ENST00000360016 DMAC1Q96GE9 116 aa11.07□□□□□ -0.64
BRD4-202ENST00000360016 MIR22HGQ0VDD5 57 aa11.05□□□□□ -0.64
BRD4-202ENST00000360016 KRTAP10-8P60410 259 aa11.05□□□□□ -0.64
BRD4-202ENST00000360016 LINC01554Q52M75 96 aa11.04□□□□□ -0.64
BRD4-202ENST00000360016 C20orf166-AS1Q96NR2 134 aa11.03□□□□□ -0.64
BRD4-202ENST00000360016 A8MUU9 505 aa11.03□□□□□ -0.64
BRD4-202ENST00000360016 RYR1P21817 5038 aa11.01□□□□□ -0.65
BRD4-202ENST00000360016 TNXBP22105 4242 aa11□□□□□ -0.65
BRD4-202ENST00000360016 LRP1Q07954 4544 aaKnown RBP10.99□□□□□ -0.65
BRD4-202ENST00000360016 CSAG1Q6PB30 78 aa10.98□□□□□ -0.65
BRD4-202ENST00000360016 KRTAP17-1Q9BYP8 105 aa10.98□□□□□ -0.65
BRD4-202ENST00000360016 UQCR11O14957 56 aa10.94□□□□□ -0.66
BRD4-202ENST00000360016 FAT3Q8TDW7 4589 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms