RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 ASB16-AS1Q495Z4 193 aa12.37□□□□□ -0.43
TRIM3-202ENST00000359518 MEGF8Q7Z7M0 2845 aa12.37□□□□□ -0.43
TRIM3-202ENST00000359518 IGLV5-52A0A0A0MRZ9 124 aa12.37□□□□□ -0.43
TRIM3-202ENST00000359518 SPAG11AQ6PDA7 123 aa12.36□□□□□ -0.43
TRIM3-202ENST00000359518 MRPL34Q9BQ48 92 aaKnown RBP12.35□□□□□ -0.43
TRIM3-202ENST00000359518 ZNF706Q9Y5V0 76 aaPredicted RBP12.34□□□□□ -0.43
TRIM3-202ENST00000359518 VPS13DQ5THJ4 4388 aa12.33□□□□□ -0.44
TRIM3-202ENST00000359518 ZNF861PO60384 105 aa12.32□□□□□ -0.44
TRIM3-202ENST00000359518 RBM12B-AS1Q9P1G2 102 aa12.32□□□□□ -0.44
TRIM3-202ENST00000359518 Q6ZR54 194 aa12.32□□□□□ -0.44
TRIM3-202ENST00000359518 FBN3Q75N90 2809 aa12.3□□□□□ -0.44
TRIM3-202ENST00000359518 PRKDCP78527 4128 aaKnown RBP12.3□□□□□ -0.44
TRIM3-202ENST00000359518 A6NED7 52 aa12.3□□□□□ -0.44
TRIM3-202ENST00000359518 CIRBP-AS1Q8TBR5 109 aa12.3□□□□□ -0.44
TRIM3-202ENST00000359518 DNAH2Q9P225 4427 aa12.3□□□□□ -0.44
TRIM3-202ENST00000359518 DNAH17Q9UFH2 4485 aa12.29□□□□□ -0.44
TRIM3-202ENST00000359518 Q5W150 140 aa12.26□□□□□ -0.45
TRIM3-202ENST00000359518 HRES1P13985 223 aa12.26□□□□□ -0.45
TRIM3-202ENST00000359518 LCA10Q71F78 164 aa12.25□□□□□ -0.45
TRIM3-202ENST00000359518 PLAC8Q9NZF1 115 aa12.24□□□□□ -0.45
TRIM3-202ENST00000359518 Q75L30 129 aa12.21□□□□□ -0.46
TRIM3-202ENST00000359518 LOC101927531A0A1B0GV80 90 aa12.19□□□□□ -0.46
TRIM3-202ENST00000359518 RETNLBQ9BQ08 111 aa12.19□□□□□ -0.46
TRIM3-202ENST00000359518 PRR26Q8N8Z3 221 aa12.18□□□□□ -0.46
TRIM3-202ENST00000359518 IGLV7-43P04211 117 aa12.16□□□□□ -0.46
TRIM3-202ENST00000359518 KTN1-AS1Q86SY8 53 aa12.16□□□□□ -0.46
TRIM3-202ENST00000359518 DNAH6Q9C0G6 4158 aa12.16□□□□□ -0.46
TRIM3-202ENST00000359518 LINC01558Q9Y6Z2 57 aa12.13□□□□□ -0.47
TRIM3-202ENST00000359518 SPINK7P58062 85 aa12.11□□□□□ -0.47
TRIM3-202ENST00000359518 C1orf134Q5TEV5 83 aa12.11□□□□□ -0.47
TRIM3-202ENST00000359518 LY6G6CO95867 125 aa12.07□□□□□ -0.48
TRIM3-202ENST00000359518 DNAH11Q96DT5 4516 aa12.07□□□□□ -0.48
TRIM3-202ENST00000359518 KRTAP13-3Q3SY46 172 aa12.05□□□□□ -0.48
TRIM3-202ENST00000359518 ALMS1Q8TCU4 4167 aa12.05□□□□□ -0.48
TRIM3-202ENST00000359518 C4orf48Q5BLP8 95 aa12.05□□□□□ -0.48
TRIM3-202ENST00000359518 ATP11AUNQ6ZP68 121 aa12.04□□□□□ -0.48
TRIM3-202ENST00000359518 CDC42SE1Q9NRR8 79 aa12.03□□□□□ -0.48
TRIM3-202ENST00000359518 KRTAP10-2P60368 255 aa12.01□□□□□ -0.49
TRIM3-202ENST00000359518 LINC00313P59037 77 aa12□□□□□ -0.49
TRIM3-202ENST00000359518 SSBP3-AS1Q7Z2R9 100 aa11.97□□□□□ -0.49
TRIM3-202ENST00000359518 DNAH5Q8TE73 4624 aa11.96□□□□□ -0.49
TRIM3-202ENST00000359518 ACYP2P14621 99 aa11.95□□□□□ -0.5
TRIM3-202ENST00000359518 LRP1BQ9NZR2 4599 aa11.94□□□□□ -0.5
TRIM3-202ENST00000359518 KRTAP13-2Q52LG2 175 aa11.93□□□□□ -0.5
TRIM3-202ENST00000359518 PRAC1Q96KF2 57 aa11.93□□□□□ -0.5
TRIM3-202ENST00000359518 C8orf87E5RJ46 101 aa11.93□□□□□ -0.5
TRIM3-202ENST00000359518 A6NN06 94 aa11.92□□□□□ -0.5
TRIM3-202ENST00000359518 FAM229AH3BQW9 127 aa11.87□□□□□ -0.51
TRIM3-202ENST00000359518 IGKV2D-30A0A075B6S6 120 aa11.85□□□□□ -0.51
TRIM3-202ENST00000359518 IGKV2-30P06310 120 aa11.85□□□□□ -0.51
TRIM3-202ENST00000359518 DMAC1Q96GE9 116 aa11.85□□□□□ -0.51
TRIM3-202ENST00000359518 H3BS24 57 aa11.84□□□□□ -0.51
TRIM3-202ENST00000359518 KRTAP10-1P60331 282 aa11.83□□□□□ -0.52
TRIM3-202ENST00000359518 C7orf65Q6ZTY9 151 aa11.82□□□□□ -0.52
TRIM3-202ENST00000359518 ADM2Q7Z4H4 148 aa11.82□□□□□ -0.52
TRIM3-202ENST00000359518 A0A1B0GU69 56 aa11.77□□□□□ -0.53
TRIM3-202ENST00000359518 VPS13BQ7Z7G8 4022 aa11.77□□□□□ -0.53
TRIM3-202ENST00000359518 KRTAP16-1A8MUX0 517 aa11.76□□□□□ -0.53
TRIM3-202ENST00000359518 HYDINQ4G0P3 5121 aa11.74□□□□□ -0.53
TRIM3-202ENST00000359518 KRTAP1-4P0C5Y4 121 aa11.72□□□□□ -0.53
TRIM3-202ENST00000359518 KRTAP21-3Q3LHN1 58 aa11.72□□□□□ -0.53
TRIM3-202ENST00000359518 PLA2G1BP04054 148 aaKnown RBP11.69□□□□□ -0.54
TRIM3-202ENST00000359518 PKD1P98161 4303 aa11.68□□□□□ -0.54
TRIM3-202ENST00000359518 SPINK1P00995 79 aa11.66□□□□□ -0.54
TRIM3-202ENST00000359518 Q6ZSA8 131 aa11.65□□□□□ -0.54
TRIM3-202ENST00000359518 FAT2Q9NYQ8 4349 aa11.64□□□□□ -0.55
TRIM3-202ENST00000359518 TYMSOSQ8TAI1 123 aa11.64□□□□□ -0.55
TRIM3-202ENST00000359518 Q8N1X5 172 aa11.61□□□□□ -0.55
TRIM3-202ENST00000359518 MIR22HGQ0VDD5 57 aa11.55□□□□□ -0.56
TRIM3-202ENST00000359518 PKHD1P08F94 4074 aa11.54□□□□□ -0.56
TRIM3-202ENST00000359518 UQCR11O14957 56 aa11.52□□□□□ -0.56
TRIM3-202ENST00000359518 SPATA8Q6RVD6 105 aa11.52□□□□□ -0.57
TRIM3-202ENST00000359518 LINC01554Q52M75 96 aa11.49□□□□□ -0.57
TRIM3-202ENST00000359518 SMR3BP02814 79 aaPredicted RBP11.46□□□□□ -0.57
TRIM3-202ENST00000359518 C9orf92A6NGG3 77 aa11.45□□□□□ -0.58
TRIM3-202ENST00000359518 LINC00304Q8N9R0 145 aa11.44□□□□□ -0.58
TRIM3-202ENST00000359518 FAT1Q14517 4588 aa11.37□□□□□ -0.59
TRIM3-202ENST00000359518 CSAG1Q6PB30 78 aa11.31□□□□□ -0.6
TRIM3-202ENST00000359518 FLG2Q5D862 2391 aaPredicted RBP11.26□□□□□ -0.61
TRIM3-202ENST00000359518 DYNC1H1Q14204 4646 aaKnown RBP11.26□□□□□ -0.61
TRIM3-202ENST00000359518 SACSQ9NZJ4 4579 aa11.22□□□□□ -0.61
TRIM3-202ENST00000359518 KRTAP3-1Q9BYR8 98 aa11.2□□□□□ -0.62
TRIM3-202ENST00000359518 H0YAA0 97 aa11.16□□□□□ -0.62
TRIM3-202ENST00000359518 RPS29P62273 56 aaKnown RBP11.15□□□□□ -0.62
TRIM3-202ENST00000359518 A8MUU9 505 aa11.14□□□□□ -0.63
TRIM3-202ENST00000359518 C20orf166-AS1Q96NR2 134 aa11.14□□□□□ -0.63
TRIM3-202ENST00000359518 KMT2CQ8NEZ4 4911 aaKnown RBP11.12□□□□□ -0.63
TRIM3-202ENST00000359518 DMBT1Q9UGM3 2413 aaPredicted RBP11.09□□□□□ -0.63
TRIM3-202ENST00000359518 A0A1B0GU33 70 aa11.07□□□□□ -0.64
TRIM3-202ENST00000359518 APOBP04114 4563 aaKnown RBP11.04□□□□□ -0.64
TRIM3-202ENST00000359518 PKHD1L1Q86WI1 4243 aa11.01□□□□□ -0.65
TRIM3-202ENST00000359518 KRTAP10-4P60372 401 aaPredicted RBP11□□□□□ -0.65
TRIM3-202ENST00000359518 H1FX-AS1Q4G0G2 97 aa10.98□□□□□ -0.65
TRIM3-202ENST00000359518 LRP1Q07954 4544 aaKnown RBP10.95□□□□□ -0.66
TRIM3-202ENST00000359518 CRIPTQ9P021 101 aa10.95□□□□□ -0.66
TRIM3-202ENST00000359518 RYR2Q92736 4967 aa10.92□□□□□ -0.66
TRIM3-202ENST00000359518 COX6B2Q6YFQ2 88 aa10.91□□□□□ -0.66
TRIM3-202ENST00000359518 MYCBP2O75592 4640 aa10.9□□□□□ -0.66
TRIM3-202ENST00000359518 A0A1B0GVY2 172 aa10.9□□□□□ -0.67
TRIM3-202ENST00000359518 HSPG2P98160 4391 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms