RNA–Protein interactions for RNA: ENST00000358438.6

POLR2J2-202, Transcript of RNA polymerase II subunit J2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J2, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2-202ENST00000358438 RYR3Q15413 4870 aa13.64□□□□□ -0.23
POLR2J2-202ENST00000358438 LCA10Q71F78 164 aa13.63□□□□□ -0.23
POLR2J2-202ENST00000358438 COA5Q86WW8 74 aa13.63□□□□□ -0.23
POLR2J2-202ENST00000358438 CDC42SE1Q9NRR8 79 aa13.63□□□□□ -0.23
POLR2J2-202ENST00000358438 A6NN06 94 aa13.62□□□□□ -0.23
POLR2J2-202ENST00000358438 A6NED7 52 aa13.61□□□□□ -0.23
POLR2J2-202ENST00000358438 PKD1P98161 4303 aa13.61□□□□□ -0.23
POLR2J2-202ENST00000358438 KRTAP13-1Q8IUC0 172 aa13.6□□□□□ -0.23
POLR2J2-202ENST00000358438 RBM12B-AS1Q9P1G2 102 aa13.6□□□□□ -0.23
POLR2J2-202ENST00000358438 DNAH5Q8TE73 4624 aa13.59□□□□□ -0.23
POLR2J2-202ENST00000358438 RPL37AP61513 92 aaKnown RBP13.59□□□□□ -0.23
POLR2J2-202ENST00000358438 SPTSSBQ8NFR3 76 aa13.59□□□□□ -0.23
POLR2J2-202ENST00000358438 SRRM2Q9UQ35 2752 aaKnown RBP13.58□□□□□ -0.24
POLR2J2-202ENST00000358438 PSORS1C2Q9UIG4 136 aa13.57□□□□□ -0.24
POLR2J2-202ENST00000358438 LINC01558Q9Y6Z2 57 aa13.57□□□□□ -0.24
POLR2J2-202ENST00000358438 DNAH8Q96JB1 4490 aa13.56□□□□□ -0.24
POLR2J2-202ENST00000358438 A0A0G2JQZ4 141 aa13.56□□□□□ -0.24
POLR2J2-202ENST00000358438 LINC00472Q9H8W2 130 aa13.56□□□□□ -0.24
POLR2J2-202ENST00000358438 KRTAP10-1P60331 282 aa13.54□□□□□ -0.24
POLR2J2-202ENST00000358438 Q6ZSA8 131 aa13.54□□□□□ -0.24
POLR2J2-202ENST00000358438 CIRBP-AS1Q8TBR5 109 aa13.53□□□□□ -0.24
POLR2J2-202ENST00000358438 SPRR1BP22528 89 aa13.52□□□□□ -0.24
POLR2J2-202ENST00000358438 TP53AIP1Q9HCN2 124 aa13.49□□□□□ -0.25
POLR2J2-202ENST00000358438 C7orf65Q6ZTY9 151 aa13.49□□□□□ -0.25
POLR2J2-202ENST00000358438 MMP24-AS1A0A0U1RRL7 71 aa13.48□□□□□ -0.25
POLR2J2-202ENST00000358438 ZNF861PO60384 105 aa13.43□□□□□ -0.26
POLR2J2-202ENST00000358438 ASB16-AS1Q495Z4 193 aa13.42□□□□□ -0.26
POLR2J2-202ENST00000358438 MOBPQ13875 183 aa13.4□□□□□ -0.26
POLR2J2-202ENST00000358438 IGLV7-43P04211 117 aa13.39□□□□□ -0.27
POLR2J2-202ENST00000358438 ZNF706Q9Y5V0 76 aaPredicted RBP13.37□□□□□ -0.27
POLR2J2-202ENST00000358438 PKHD1P08F94 4074 aa13.35□□□□□ -0.27
POLR2J2-202ENST00000358438 LINC00483Q53H64 154 aa13.35□□□□□ -0.27
POLR2J2-202ENST00000358438 A0A1B0GVY2 172 aa13.34□□□□□ -0.27
POLR2J2-202ENST00000358438 SPAG11AQ6PDA7 123 aa13.33□□□□□ -0.27
POLR2J2-202ENST00000358438 PCOTHQ58A44 107 aa13.33□□□□□ -0.28
POLR2J2-202ENST00000358438 LRP1BQ9NZR2 4599 aa13.29□□□□□ -0.28
POLR2J2-202ENST00000358438 HRES1P13985 223 aa13.27□□□□□ -0.29
POLR2J2-202ENST00000358438 IGLV9-49A0A0B4J1Y8 123 aa13.26□□□□□ -0.29
POLR2J2-202ENST00000358438 C8orf17Q9NRJ1 99 aa13.25□□□□□ -0.29
POLR2J2-202ENST00000358438 SPINK7P58062 85 aa13.25□□□□□ -0.29
POLR2J2-202ENST00000358438 ANAPC11Q9NYG5 84 aa13.24□□□□□ -0.29
POLR2J2-202ENST00000358438 Q96NJ1 140 aa13.22□□□□□ -0.29
POLR2J2-202ENST00000358438 EPPK1P58107 5090 aaKnown RBP13.16□□□□□ -0.3
POLR2J2-202ENST00000358438 DYNC1H1Q14204 4646 aaKnown RBP13.15□□□□□ -0.3
POLR2J2-202ENST00000358438 A0A1B0GVX0 72 aa13.14□□□□□ -0.31
POLR2J2-202ENST00000358438 MRPL34Q9BQ48 92 aaKnown RBP13.14□□□□□ -0.31
POLR2J2-202ENST00000358438 VPS13BQ7Z7G8 4022 aa13.12□□□□□ -0.31
POLR2J2-202ENST00000358438 A0A087X002 238 aa13.11□□□□□ -0.31
POLR2J2-202ENST00000358438 CDK2AP2O75956 126 aa13.07□□□□□ -0.32
POLR2J2-202ENST00000358438 SMR3BP02814 79 aaPredicted RBP13.05□□□□□ -0.32
POLR2J2-202ENST00000358438 C8orf87E5RJ46 101 aa13.04□□□□□ -0.32
POLR2J2-202ENST00000358438 LINC00313P59037 77 aa13.04□□□□□ -0.32
POLR2J2-202ENST00000358438 IGHV6-1A0A0B4J1U7 121 aa13.03□□□□□ -0.32
POLR2J2-202ENST00000358438 PLA2G1BP04054 148 aaKnown RBP13.03□□□□□ -0.32
POLR2J2-202ENST00000358438 ACYP2P14621 99 aa13.03□□□□□ -0.32
POLR2J2-202ENST00000358438 APOBP04114 4563 aaKnown RBP13.01□□□□□ -0.33
POLR2J2-202ENST00000358438 KRTAP1-4P0C5Y4 121 aa13.01□□□□□ -0.33
POLR2J2-202ENST00000358438 SSBP3-AS1Q7Z2R9 100 aa13□□□□□ -0.33
POLR2J2-202ENST00000358438 PRR26Q8N8Z3 221 aa12.98□□□□□ -0.33
POLR2J2-202ENST00000358438 SPINK6Q6UWN8 80 aa12.98□□□□□ -0.33
POLR2J2-202ENST00000358438 KRTAP13-2Q52LG2 175 aa12.97□□□□□ -0.33
POLR2J2-202ENST00000358438 KRTAP13-3Q3SY46 172 aa12.95□□□□□ -0.34
POLR2J2-202ENST00000358438 KRTAP10-4P60372 401 aaPredicted RBP12.92□□□□□ -0.34
POLR2J2-202ENST00000358438 SPATA8Q6RVD6 105 aa12.91□□□□□ -0.34
POLR2J2-202ENST00000358438 DMAC1Q96GE9 116 aa12.9□□□□□ -0.34
POLR2J2-202ENST00000358438 FAT1Q14517 4588 aa12.87□□□□□ -0.35
POLR2J2-202ENST00000358438 LINC01554Q52M75 96 aa12.86□□□□□ -0.35
POLR2J2-202ENST00000358438 PRAC1Q96KF2 57 aa12.85□□□□□ -0.35
POLR2J2-202ENST00000358438 C4orf48Q5BLP8 95 aa12.85□□□□□ -0.35
POLR2J2-202ENST00000358438 A0A1B0GU69 56 aa12.84□□□□□ -0.35
POLR2J2-202ENST00000358438 NOTCH2NLQ7Z3S9 236 aa12.84□□□□□ -0.35
POLR2J2-202ENST00000358438 KIAA1109Q2LD37 5005 aa12.84□□□□□ -0.35
POLR2J2-202ENST00000358438 Q5W150 140 aa12.84□□□□□ -0.35
POLR2J2-202ENST00000358438 TYMSOSQ8TAI1 123 aa12.81□□□□□ -0.36
POLR2J2-202ENST00000358438 RYR1P21817 5038 aa12.8□□□□□ -0.36
POLR2J2-202ENST00000358438 BIRC6Q9NR09 4857 aa12.78□□□□□ -0.36
POLR2J2-202ENST00000358438 HSPG2P98160 4391 aa12.77□□□□□ -0.36
POLR2J2-202ENST00000358438 FAM229AH3BQW9 127 aa12.75□□□□□ -0.37
POLR2J2-202ENST00000358438 UQCR11O14957 56 aa12.74□□□□□ -0.37
POLR2J2-202ENST00000358438 ADM2Q7Z4H4 148 aa12.74□□□□□ -0.37
POLR2J2-202ENST00000358438 MIR22HGQ0VDD5 57 aa12.73□□□□□ -0.37
POLR2J2-202ENST00000358438 KRTAP17-1Q9BYP8 105 aa12.73□□□□□ -0.37
POLR2J2-202ENST00000358438 SPINK1P00995 79 aa12.67□□□□□ -0.38
POLR2J2-202ENST00000358438 Q5VSD8 79 aa12.67□□□□□ -0.38
POLR2J2-202ENST00000358438 LINC00304Q8N9R0 145 aa12.65□□□□□ -0.39
POLR2J2-202ENST00000358438 RETNLBQ9BQ08 111 aa12.64□□□□□ -0.39
POLR2J2-202ENST00000358438 IGKV2-30P06310 120 aa12.63□□□□□ -0.39
POLR2J2-202ENST00000358438 Q8N1X5 172 aa12.59□□□□□ -0.39
POLR2J2-202ENST00000358438 RPS29P62273 56 aaKnown RBP12.58□□□□□ -0.4
POLR2J2-202ENST00000358438 PKHD1L1Q86WI1 4243 aa12.57□□□□□ -0.4
POLR2J2-202ENST00000358438 KRTAP4-5Q9BYR2 181 aa12.52□□□□□ -0.4
POLR2J2-202ENST00000358438 HERC2O95714 4834 aa12.5□□□□□ -0.41
POLR2J2-202ENST00000358438 CSAG1Q6PB30 78 aa12.48□□□□□ -0.41
POLR2J2-202ENST00000358438 H3BS24 57 aa12.46□□□□□ -0.41
POLR2J2-202ENST00000358438 LRP1Q07954 4544 aaKnown RBP12.4□□□□□ -0.42
POLR2J2-202ENST00000358438 KRTAP10-8P60410 259 aa12.39□□□□□ -0.43
POLR2J2-202ENST00000358438 IGKV2D-30A0A075B6S6 120 aa12.38□□□□□ -0.43
POLR2J2-202ENST00000358438 KRTAP16-1A8MUX0 517 aa12.35□□□□□ -0.43
POLR2J2-202ENST00000358438 ABCA13Q86UQ4 5058 aa12.35□□□□□ -0.43
POLR2J2-202ENST00000358438 FLG2Q5D862 2391 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms