RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 CDK2AP2O75956 126 aa12.2□□□□□ -0.46
COL13A1-202ENST00000357811 ZNF861PO60384 105 aa12.2□□□□□ -0.46
COL13A1-202ENST00000357811 LINC00483Q53H64 154 aa12.19□□□□□ -0.46
COL13A1-202ENST00000357811 CIRBP-AS1Q8TBR5 109 aa12.18□□□□□ -0.46
COL13A1-202ENST00000357811 LIMD2Q9BT23 127 aa12.18□□□□□ -0.46
COL13A1-202ENST00000357811 LY6G6CO95867 125 aa12.17□□□□□ -0.46
COL13A1-202ENST00000357811 KTN1-AS1Q86SY8 53 aa12.17□□□□□ -0.46
COL13A1-202ENST00000357811 RBM12B-AS1Q9P1G2 102 aa12.16□□□□□ -0.46
COL13A1-202ENST00000357811 A0A1B0GVX0 72 aa12.16□□□□□ -0.46
COL13A1-202ENST00000357811 ZNF706Q9Y5V0 76 aaPredicted RBP12.16□□□□□ -0.46
COL13A1-202ENST00000357811 LCA10Q71F78 164 aa12.15□□□□□ -0.47
COL13A1-202ENST00000357811 H3BPC8 53 aa12.14□□□□□ -0.47
COL13A1-202ENST00000357811 PLAC8Q9NZF1 115 aa12.14□□□□□ -0.47
COL13A1-202ENST00000357811 Q6ZR54 194 aa12.13□□□□□ -0.47
COL13A1-202ENST00000357811 C1orf134Q5TEV5 83 aa12.12□□□□□ -0.47
COL13A1-202ENST00000357811 SPANXA2-OT1Q8N9U9 137 aa12.12□□□□□ -0.47
COL13A1-202ENST00000357811 DNAH11Q96DT5 4516 aa12.1□□□□□ -0.47
COL13A1-202ENST00000357811 COA5Q86WW8 74 aa12.09□□□□□ -0.47
COL13A1-202ENST00000357811 MRPL34Q9BQ48 92 aaKnown RBP12.08□□□□□ -0.48
COL13A1-202ENST00000357811 IGLV7-43P04211 117 aa12.06□□□□□ -0.48
COL13A1-202ENST00000357811 ASB16-AS1Q495Z4 193 aa12.06□□□□□ -0.48
COL13A1-202ENST00000357811 ATP11AUNQ6ZP68 121 aa12.06□□□□□ -0.48
COL13A1-202ENST00000357811 TP53AIP1Q9HCN2 124 aa12.05□□□□□ -0.48
COL13A1-202ENST00000357811 KRTAP10-2P60368 255 aa12.04□□□□□ -0.48
COL13A1-202ENST00000357811 IGLV7-46A0A075B6I9 117 aa12.04□□□□□ -0.48
COL13A1-202ENST00000357811 SPAG11AQ6PDA7 123 aa12.03□□□□□ -0.48
COL13A1-202ENST00000357811 RETNLBQ9BQ08 111 aa12.03□□□□□ -0.48
COL13A1-202ENST00000357811 Q5W150 140 aa12.01□□□□□ -0.49
COL13A1-202ENST00000357811 Q75L30 129 aa12.01□□□□□ -0.49
COL13A1-202ENST00000357811 ALMS1Q8TCU4 4167 aa12□□□□□ -0.49
COL13A1-202ENST00000357811 DNAH5Q8TE73 4624 aa11.98□□□□□ -0.49
COL13A1-202ENST00000357811 A6NN06 94 aa11.97□□□□□ -0.49
COL13A1-202ENST00000357811 LRP1BQ9NZR2 4599 aa11.96□□□□□ -0.5
COL13A1-202ENST00000357811 LOC101927531A0A1B0GV80 90 aa11.95□□□□□ -0.5
COL13A1-202ENST00000357811 CDC42SE1Q9NRR8 79 aa11.94□□□□□ -0.5
COL13A1-202ENST00000357811 HRES1P13985 223 aa11.9□□□□□ -0.5
COL13A1-202ENST00000357811 HYDINQ4G0P3 5121 aa11.89□□□□□ -0.51
COL13A1-202ENST00000357811 SPINK7P58062 85 aa11.87□□□□□ -0.51
COL13A1-202ENST00000357811 C7orf65Q6ZTY9 151 aa11.87□□□□□ -0.51
COL13A1-202ENST00000357811 PRR26Q8N8Z3 221 aa11.85□□□□□ -0.51
COL13A1-202ENST00000357811 KRTAP10-1P60331 282 aa11.84□□□□□ -0.51
COL13A1-202ENST00000357811 KRTAP13-2Q52LG2 175 aa11.83□□□□□ -0.52
COL13A1-202ENST00000357811 LINC01558Q9Y6Z2 57 aa11.8□□□□□ -0.52
COL13A1-202ENST00000357811 SSBP3-AS1Q7Z2R9 100 aa11.8□□□□□ -0.52
COL13A1-202ENST00000357811 LINC00313P59037 77 aa11.79□□□□□ -0.52
COL13A1-202ENST00000357811 VPS13BQ7Z7G8 4022 aa11.77□□□□□ -0.53
COL13A1-202ENST00000357811 KRTAP13-3Q3SY46 172 aa11.77□□□□□ -0.53
COL13A1-202ENST00000357811 PRAC1Q96KF2 57 aa11.73□□□□□ -0.53
COL13A1-202ENST00000357811 FAT2Q9NYQ8 4349 aa11.72□□□□□ -0.53
COL13A1-202ENST00000357811 PKD1P98161 4303 aa11.72□□□□□ -0.53
COL13A1-202ENST00000357811 C8orf87E5RJ46 101 aa11.68□□□□□ -0.54
COL13A1-202ENST00000357811 PKHD1P08F94 4074 aa11.67□□□□□ -0.54
COL13A1-202ENST00000357811 IGKV2D-30A0A075B6S6 120 aa11.65□□□□□ -0.54
COL13A1-202ENST00000357811 IGKV2-30P06310 120 aa11.65□□□□□ -0.54
COL13A1-202ENST00000357811 PLA2G1BP04054 148 aaKnown RBP11.64□□□□□ -0.55
COL13A1-202ENST00000357811 KRTAP1-4P0C5Y4 121 aa11.64□□□□□ -0.55
COL13A1-202ENST00000357811 ADM2Q7Z4H4 148 aa11.64□□□□□ -0.55
COL13A1-202ENST00000357811 Q6ZSA8 131 aa11.62□□□□□ -0.55
COL13A1-202ENST00000357811 FAM229AH3BQW9 127 aa11.61□□□□□ -0.55
COL13A1-202ENST00000357811 ACYP2P14621 99 aa11.61□□□□□ -0.55
COL13A1-202ENST00000357811 C4orf48Q5BLP8 95 aa11.58□□□□□ -0.55
COL13A1-202ENST00000357811 TYMSOSQ8TAI1 123 aa11.56□□□□□ -0.56
COL13A1-202ENST00000357811 KRTAP16-1A8MUX0 517 aa11.55□□□□□ -0.56
COL13A1-202ENST00000357811 SMR3BP02814 79 aaPredicted RBP11.54□□□□□ -0.56
COL13A1-202ENST00000357811 DMAC1Q96GE9 116 aa11.53□□□□□ -0.56
COL13A1-202ENST00000357811 FAT1Q14517 4588 aa11.47□□□□□ -0.57
COL13A1-202ENST00000357811 SPINK1P00995 79 aa11.43□□□□□ -0.58
COL13A1-202ENST00000357811 LINC01554Q52M75 96 aa11.43□□□□□ -0.58
COL13A1-202ENST00000357811 A0A1B0GU69 56 aa11.41□□□□□ -0.58
COL13A1-202ENST00000357811 Q8N1X5 172 aa11.41□□□□□ -0.58
COL13A1-202ENST00000357811 C9orf92A6NGG3 77 aa11.37□□□□□ -0.59
COL13A1-202ENST00000357811 H3BS24 57 aa11.36□□□□□ -0.59
COL13A1-202ENST00000357811 LINC00304Q8N9R0 145 aa11.36□□□□□ -0.59
COL13A1-202ENST00000357811 SACSQ9NZJ4 4579 aa11.36□□□□□ -0.59
COL13A1-202ENST00000357811 DYNC1H1Q14204 4646 aaKnown RBP11.33□□□□□ -0.6
COL13A1-202ENST00000357811 MIR22HGQ0VDD5 57 aa11.28□□□□□ -0.6
COL13A1-202ENST00000357811 CSAG1Q6PB30 78 aa11.25□□□□□ -0.61
COL13A1-202ENST00000357811 SPATA8Q6RVD6 105 aa11.24□□□□□ -0.61
COL13A1-202ENST00000357811 UQCR11O14957 56 aa11.22□□□□□ -0.61
COL13A1-202ENST00000357811 APOBP04114 4563 aaKnown RBP11.11□□□□□ -0.63
COL13A1-202ENST00000357811 DMBT1Q9UGM3 2413 aaPredicted RBP11.09□□□□□ -0.63
COL13A1-202ENST00000357811 KMT2CQ8NEZ4 4911 aaKnown RBP11.07□□□□□ -0.64
COL13A1-202ENST00000357811 LRP1Q07954 4544 aaKnown RBP11.05□□□□□ -0.64
COL13A1-202ENST00000357811 FLG2Q5D862 2391 aaPredicted RBP11.05□□□□□ -0.64
COL13A1-202ENST00000357811 KRTAP10-4P60372 401 aaPredicted RBP11.01□□□□□ -0.65
COL13A1-202ENST00000357811 RPS29P62273 56 aaKnown RBP11□□□□□ -0.65
COL13A1-202ENST00000357811 KRTAP3-1Q9BYR8 98 aa11□□□□□ -0.65
COL13A1-202ENST00000357811 A0A1B0GVY2 172 aa10.98□□□□□ -0.65
COL13A1-202ENST00000357811 A8MUU9 505 aa10.98□□□□□ -0.65
COL13A1-202ENST00000357811 C20orf166-AS1Q96NR2 134 aa10.97□□□□□ -0.65
COL13A1-202ENST00000357811 MYCBP2O75592 4640 aa10.97□□□□□ -0.65
COL13A1-202ENST00000357811 PKHD1L1Q86WI1 4243 aa10.95□□□□□ -0.66
COL13A1-202ENST00000357811 RYR2Q92736 4967 aa10.91□□□□□ -0.66
COL13A1-202ENST00000357811 H0YAA0 97 aa10.84□□□□□ -0.67
COL13A1-202ENST00000357811 HSPG2P98160 4391 aa10.81□□□□□ -0.68
COL13A1-202ENST00000357811 A0A1B0GU33 70 aa10.77□□□□□ -0.69
COL13A1-202ENST00000357811 FAT3Q8TDW7 4589 aa10.76□□□□□ -0.69
COL13A1-202ENST00000357811 CRIPTQ9P021 101 aa10.76□□□□□ -0.69
COL13A1-202ENST00000357811 KRTAP25-1Q3LHN0 102 aa10.73□□□□□ -0.69
COL13A1-202ENST00000357811 KRTAP21-3Q3LHN1 58 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms