RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 STAB1Q9NY15 2570 aa3.24□□□□□ -1.89
BRCA1-203ENST00000357654 KRTAP25-1Q3LHN0 102 aa3.23□□□□□ -1.89
BRCA1-203ENST00000357654 SPRR1AP35321 89 aa3.23□□□□□ -1.89
BRCA1-203ENST00000357654 HELZ2Q9BYK8 2649 aaKnown RBP3.22□□□□□ -1.89
BRCA1-203ENST00000357654 FBN2P35556 2912 aa3.21□□□□□ -1.9
BRCA1-203ENST00000357654 USP24Q9UPU5 2620 aa3.21□□□□□ -1.9
BRCA1-203ENST00000357654 CELSR1Q9NYQ6 3014 aa3.21□□□□□ -1.9
BRCA1-203ENST00000357654 CFAP46Q8IYW2 2715 aa3.2□□□□□ -1.9
BRCA1-203ENST00000357654 MGAM2Q2M2H8 2515 aa3.2□□□□□ -1.9
BRCA1-203ENST00000357654 ZNF469Q96JG9 3925 aaPredicted RBP3.19□□□□□ -1.9
BRCA1-203ENST00000357654 UBR5O95071 2799 aaPredicted RBP3.19□□□□□ -1.9
BRCA1-203ENST00000357654 CRCT1Q9UGL9 99 aa3.18□□□□□ -1.9
BRCA1-203ENST00000357654 CYSTM1Q9H1C7 97 aa3.18□□□□□ -1.9
BRCA1-203ENST00000357654 PRRC2CQ9Y520 2896 aaKnown RBP3.18□□□□□ -1.9
BRCA1-203ENST00000357654 CELSR2Q9HCU4 2923 aa3.18□□□□□ -1.9
BRCA1-203ENST00000357654 DYNC2H1Q8NCM8 4307 aaKnown RBP3.17□□□□□ -1.9
BRCA1-203ENST00000357654 CUBNO60494 3623 aa3.17□□□□□ -1.9
BRCA1-203ENST00000357654 CMYA5Q8N3K9 4069 aa3.17□□□□□ -1.9
BRCA1-203ENST00000357654 Q5XG85 94 aa3.17□□□□□ -1.9
BRCA1-203ENST00000357654 NOTCH1P46531 2555 aa3.16□□□□□ -1.9
BRCA1-203ENST00000357654 DSPP15924 2871 aaKnown RBP3.16□□□□□ -1.9
BRCA1-203ENST00000357654 KRTAP13-2Q52LG2 175 aa3.15□□□□□ -1.9
BRCA1-203ENST00000357654 CSMD1Q96PZ7 3565 aa3.15□□□□□ -1.9
BRCA1-203ENST00000357654 CRYBG3Q68DQ2 2970 aa3.15□□□□□ -1.9
BRCA1-203ENST00000357654 KRTAP11-1Q8IUC1 163 aa3.15□□□□□ -1.9
BRCA1-203ENST00000357654 ATRQ13535 2644 aa3.15□□□□□ -1.91
BRCA1-203ENST00000357654 KMT2BQ9UMN6 2715 aaPredicted RBP3.14□□□□□ -1.91
BRCA1-203ENST00000357654 CSMD2Q7Z408 3487 aa3.14□□□□□ -1.91
BRCA1-203ENST00000357654 MGAQ8IWI9 3026 aa3.14□□□□□ -1.91
BRCA1-203ENST00000357654 DNHD1Q96M86 4753 aa3.13□□□□□ -1.91
BRCA1-203ENST00000357654 Q6ZRN7 208 aaPredicted RBP3.12□□□□□ -1.91
BRCA1-203ENST00000357654 HECTD1Q9ULT8 2610 aa3.12□□□□□ -1.91
BRCA1-203ENST00000357654 RPS29P62273 56 aaKnown RBP3.12□□□□□ -1.91
BRCA1-203ENST00000357654 ASH1LQ9NR48 2969 aaKnown RBP3.12□□□□□ -1.91
BRCA1-203ENST00000357654 TENM4Q6N022 2769 aa3.11□□□□□ -1.91
BRCA1-203ENST00000357654 XP32Q5T750 250 aa3.11□□□□□ -1.91
BRCA1-203ENST00000357654 ASB16-AS1Q495Z4 193 aa3.1□□□□□ -1.91
BRCA1-203ENST00000357654 LRBAP50851 2863 aa3.1□□□□□ -1.91
BRCA1-203ENST00000357654 DMBT1Q9UGM3 2413 aaPredicted RBP3.1□□□□□ -1.91
BRCA1-203ENST00000357654 CHD6Q8TD26 2715 aa3.09□□□□□ -1.91
BRCA1-203ENST00000357654 PP632Q6XCG6 107 aa3.08□□□□□ -1.92
BRCA1-203ENST00000357654 KRTAP21-3Q3LHN1 58 aa3.08□□□□□ -1.92
BRCA1-203ENST00000357654 PDZD2O15018 2839 aa3.08□□□□□ -1.92
BRCA1-203ENST00000357654 TRRAPQ9Y4A5 3859 aa3.08□□□□□ -1.92
BRCA1-203ENST00000357654 ADGRG4Q8IZF6 3080 aa3.07□□□□□ -1.92
BRCA1-203ENST00000357654 DNAH17Q9UFH2 4485 aa3.06□□□□□ -1.92
BRCA1-203ENST00000357654 LYSTQ99698 3801 aa3.05□□□□□ -1.92
BRCA1-203ENST00000357654 KRTAP29-1A8MX34 341 aaPredicted RBP3.05□□□□□ -1.92
BRCA1-203ENST00000357654 KRTAP12-2P59991 146 aa3.02□□□□□ -1.93
BRCA1-203ENST00000357654 BAHCC1Q9P281 2608 aa3.02□□□□□ -1.93
BRCA1-203ENST00000357654 A6NN06 94 aa3□□□□□ -1.93
BRCA1-203ENST00000357654 STAB2Q8WWQ8 2551 aa2.99□□□□□ -1.93
BRCA1-203ENST00000357654 TPRXLQ17RH7 258 aa2.99□□□□□ -1.93
BRCA1-203ENST00000357654 PRKDCP78527 4128 aaKnown RBP2.99□□□□□ -1.93
BRCA1-203ENST00000357654 GCN1Q92616 2671 aaKnown RBP2.99□□□□□ -1.93
BRCA1-203ENST00000357654 KRTAP15-1Q3LI76 137 aa2.98□□□□□ -1.93
BRCA1-203ENST00000357654 H0YAA0 97 aa2.98□□□□□ -1.93
BRCA1-203ENST00000357654 TEP1Q99973 2627 aaKnown RBP2.98□□□□□ -1.93
BRCA1-203ENST00000357654 COL6A5A8TX70 2615 aa2.98□□□□□ -1.93
BRCA1-203ENST00000357654 CSMD3Q7Z407 3707 aa2.98□□□□□ -1.93
BRCA1-203ENST00000357654 ITPR3Q14573 2671 aa2.97□□□□□ -1.93
BRCA1-203ENST00000357654 UTP20O75691 2785 aaKnown RBP2.97□□□□□ -1.93
BRCA1-203ENST00000357654 OTOGQ6ZRI0 2925 aa2.97□□□□□ -1.93
BRCA1-203ENST00000357654 DNAH11Q96DT5 4516 aa2.96□□□□□ -1.94
BRCA1-203ENST00000357654 NIPBLQ6KC79 2804 aaeCLIP2.96□□□□□ -1.94
BRCA1-203ENST00000357654 KRTAP7-1Q8IUC3 87 aa2.96□□□□□ -1.94
BRCA1-203ENST00000357654 RYR2Q92736 4967 aa2.96□□□□□ -1.94
BRCA1-203ENST00000357654 DNAH7Q8WXX0 4024 aa2.96□□□□□ -1.94
BRCA1-203ENST00000357654 DNAH2Q9P225 4427 aa2.95□□□□□ -1.94
BRCA1-203ENST00000357654 TACC2O95359 2948 aa2.94□□□□□ -1.94
BRCA1-203ENST00000357654 NBEAL1Q6ZS30 2694 aa2.94□□□□□ -1.94
BRCA1-203ENST00000357654 MXRA5Q9NR99 2828 aa2.94□□□□□ -1.94
BRCA1-203ENST00000357654 HYDINQ4G0P3 5121 aa2.94□□□□□ -1.94
BRCA1-203ENST00000357654 FLNAP21333 2647 aaKnown RBP2.92□□□□□ -1.94
BRCA1-203ENST00000357654 DNAH9Q9NYC9 4486 aa2.92□□□□□ -1.94
BRCA1-203ENST00000357654 FBN3Q75N90 2809 aa2.92□□□□□ -1.94
BRCA1-203ENST00000357654 FLNCQ14315 2725 aa2.92□□□□□ -1.94
BRCA1-203ENST00000357654 RYR3Q15413 4870 aa2.91□□□□□ -1.94
BRCA1-203ENST00000357654 IGSF10Q6WRI0 2623 aa2.91□□□□□ -1.94
BRCA1-203ENST00000357654 KRTAP13-1Q8IUC0 172 aa2.91□□□□□ -1.94
BRCA1-203ENST00000357654 KRTAP13-3Q3SY46 172 aa2.9□□□□□ -1.95
BRCA1-203ENST00000357654 PLECQ15149 4684 aaKnown RBP2.89□□□□□ -1.95
BRCA1-203ENST00000357654 COL12A1Q99715 3063 aa2.89□□□□□ -1.95
BRCA1-203ENST00000357654 DNAH10Q8IVF4 4471 aa2.88□□□□□ -1.95
BRCA1-203ENST00000357654 KRTAP10-6P60371 365 aaPredicted RBP2.88□□□□□ -1.95
BRCA1-203ENST00000357654 VPS13DQ5THJ4 4388 aa2.87□□□□□ -1.95
BRCA1-203ENST00000357654 KRTAP1-4P0C5Y4 121 aa2.87□□□□□ -1.95
BRCA1-203ENST00000357654 DNAH8Q96JB1 4490 aa2.86□□□□□ -1.95
BRCA1-203ENST00000357654 DNAH6Q9C0G6 4158 aa2.86□□□□□ -1.95
BRCA1-203ENST00000357654 PKD1P98161 4303 aa2.86□□□□□ -1.95
BRCA1-203ENST00000357654 FAT2Q9NYQ8 4349 aa2.86□□□□□ -1.95
BRCA1-203ENST00000357654 LORP23490 312 aaPredicted RBP2.85□□□□□ -1.95
BRCA1-203ENST00000357654 STARD9Q9P2P6 4700 aa2.85□□□□□ -1.95
BRCA1-203ENST00000357654 FAT3Q8TDW7 4589 aa2.85□□□□□ -1.95
BRCA1-203ENST00000357654 TEX15Q9BXT5 2789 aa2.85□□□□□ -1.95
BRCA1-203ENST00000357654 CENPEQ02224 2701 aa2.84□□□□□ -1.95
BRCA1-203ENST00000357654 HECTD4Q9Y4D8 3996 aa2.84□□□□□ -1.95
BRCA1-203ENST00000357654 NF1P21359 2839 aa2.84□□□□□ -1.95
BRCA1-203ENST00000357654 FRAS1Q86XX4 4008 aa2.82□□□□□ -1.96
BRCA1-203ENST00000357654 APCP25054 2843 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms