RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 TNP1P09430 55 aa2.77□□□□□ -1.97
SYNE2-203ENST00000357395 AKAP9Q99996 3911 aa2.76□□□□□ -1.97
SYNE2-203ENST00000357395 Q8NDZ9 215 aa2.75□□□□□ -1.97
SYNE2-203ENST00000357395 WWC2-AS2Q96NR7 200 aa2.75□□□□□ -1.97
SYNE2-203ENST00000357395 ZANQ9Y493 2812 aa2.75□□□□□ -1.97
SYNE2-203ENST00000357395 CELSR3Q9NYQ7 3312 aa2.74□□□□□ -1.97
SYNE2-203ENST00000357395 INE1O15225 51 aa2.74□□□□□ -1.97
SYNE2-203ENST00000357395 P0C880 135 aa2.73□□□□□ -1.97
SYNE2-203ENST00000357395 KRTAP10-9P60411 292 aa2.7□□□□□ -1.98
SYNE2-203ENST00000357395 MXRA5Q9NR99 2828 aa2.7□□□□□ -1.98
SYNE2-203ENST00000357395 LAMA3Q16787 3333 aa2.69□□□□□ -1.98
SYNE2-203ENST00000357395 SMR3AQ99954 134 aa2.68□□□□□ -1.98
SYNE2-203ENST00000357395 FBN2P35556 2912 aa2.67□□□□□ -1.98
SYNE2-203ENST00000357395 COL7A1Q02388 2944 aa2.67□□□□□ -1.98
SYNE2-203ENST00000357395 TENM4Q6N022 2769 aa2.67□□□□□ -1.98
SYNE2-203ENST00000357395 VCANP13611 3396 aa2.67□□□□□ -1.98
SYNE2-203ENST00000357395 A8MU10 97 aa2.66□□□□□ -1.98
SYNE2-203ENST00000357395 TENM2Q9NT68 2774 aa2.65□□□□□ -1.98
SYNE2-203ENST00000357395 ZFHX3Q15911 3703 aa2.65□□□□□ -1.99
SYNE2-203ENST00000357395 Q6ZRN7 208 aaPredicted RBP2.65□□□□□ -1.99
SYNE2-203ENST00000357395 PKD1L1Q8TDX9 2849 aa2.65□□□□□ -1.99
SYNE2-203ENST00000357395 K7EIL1 84 aa2.65□□□□□ -1.99
SYNE2-203ENST00000357395 VWFP04275 2813 aa2.64□□□□□ -1.99
SYNE2-203ENST00000357395 EYSQ5T1H1 3165 aa2.64□□□□□ -1.99
SYNE2-203ENST00000357395 KRTAP13-1Q8IUC0 172 aa2.64□□□□□ -1.99
SYNE2-203ENST00000357395 KRTAP10-11P60412 298 aa2.64□□□□□ -1.99
SYNE2-203ENST00000357395 KRTAP24-1Q3LI83 254 aa2.64□□□□□ -1.99
SYNE2-203ENST00000357395 KRTAP23-1A1A580 65 aa2.64□□□□□ -1.99
SYNE2-203ENST00000357395 Q5VSD8 79 aa2.63□□□□□ -1.99
SYNE2-203ENST00000357395 HRNRQ86YZ3 2850 aaPredicted RBP2.63□□□□□ -1.99
SYNE2-203ENST00000357395 CDH23Q9H251 3354 aa2.62□□□□□ -1.99
SYNE2-203ENST00000357395 H0YAA0 97 aa2.62□□□□□ -1.99
SYNE2-203ENST00000357395 J3QL48 77 aa2.6□□□□□ -1.99
SYNE2-203ENST00000357395 KRTAP10-3P60369 221 aa2.57□□□□□ -2
SYNE2-203ENST00000357395 SPEGQ15772 3267 aa2.57□□□□□ -2
SYNE2-203ENST00000357395 PRO2289Q9P1D8 64 aa2.56□□□□□ -2
SYNE2-203ENST00000357395 OTOGQ6ZRI0 2925 aa2.55□□□□□ -2
SYNE2-203ENST00000357395 MEGF8Q7Z7M0 2845 aa2.55□□□□□ -2
SYNE2-203ENST00000357395 C10orf95Q9H7T3 257 aa2.54□□□□□ -2
SYNE2-203ENST00000357395 FBN1P35555 2871 aaKnown RBP2.54□□□□□ -2
SYNE2-203ENST00000357395 DNAH14Q0VDD8 3507 aa2.53□□□□□ -2
SYNE2-203ENST00000357395 LOC400499M0QZD8 3231 aa2.51□□□□□ -2.01
SYNE2-203ENST00000357395 KRTAP1-3Q8IUG1 177 aa2.51□□□□□ -2.01
SYNE2-203ENST00000357395 KRTAP13-4Q3LI77 160 aa2.5□□□□□ -2.01
SYNE2-203ENST00000357395 KRTAP7-1Q8IUC3 87 aa2.48□□□□□ -2.01
SYNE2-203ENST00000357395 DCHS1Q96JQ0 3298 aa2.48□□□□□ -2.01
SYNE2-203ENST00000357395 KRTAP13-3Q3SY46 172 aa2.47□□□□□ -2.01
SYNE2-203ENST00000357395 KRTAP1-1Q07627 177 aa2.47□□□□□ -2.01
SYNE2-203ENST00000357395 SMR3BP02814 79 aaPredicted RBP2.47□□□□□ -2.01
SYNE2-203ENST00000357395 TPRXLQ17RH7 258 aa2.46□□□□□ -2.02
SYNE2-203ENST00000357395 M0R2T5 61 aa2.45□□□□□ -2.02
SYNE2-203ENST00000357395 SZT2Q5T011 3432 aa2.45□□□□□ -2.02
SYNE2-203ENST00000357395 BRCA2P51587 3418 aa2.45□□□□□ -2.02
SYNE2-203ENST00000357395 FRAS1Q86XX4 4008 aa2.44□□□□□ -2.02
SYNE2-203ENST00000357395 ALMS1Q8TCU4 4167 aa2.44□□□□□ -2.02
SYNE2-203ENST00000357395 KRTAP21-3Q3LHN1 58 aa2.44□□□□□ -2.02
SYNE2-203ENST00000357395 KRTAP1-5Q9BYS1 174 aa2.44□□□□□ -2.02
SYNE2-203ENST00000357395 ANK2Q01484 3957 aa2.44□□□□□ -2.02
SYNE2-203ENST00000357395 NBPF19A0A087WUL8 3843 aa2.43□□□□□ -2.02
SYNE2-203ENST00000357395 KRTAP15-1Q3LI76 137 aa2.42□□□□□ -2.02
SYNE2-203ENST00000357395 DNAH3Q8TD57 4116 aa2.42□□□□□ -2.02
SYNE2-203ENST00000357395 KRTAP19-4Q3LI73 84 aa2.41□□□□□ -2.02
SYNE2-203ENST00000357395 KRTAP13-2Q52LG2 175 aa2.41□□□□□ -2.02
SYNE2-203ENST00000357395 MYO15AQ9UKN7 3530 aa2.4□□□□□ -2.02
SYNE2-203ENST00000357395 KRTAP10-1P60331 282 aa2.4□□□□□ -2.02
SYNE2-203ENST00000357395 KRTAP12-2P59991 146 aa2.4□□□□□ -2.03
SYNE2-203ENST00000357395 XP32Q5T750 250 aa2.39□□□□□ -2.03
SYNE2-203ENST00000357395 CMYA5Q8N3K9 4069 aa2.39□□□□□ -2.03
SYNE2-203ENST00000357395 TRRAPQ9Y4A5 3859 aa2.38□□□□□ -2.03
SYNE2-203ENST00000357395 USP34Q70CQ2 3546 aa2.38□□□□□ -2.03
SYNE2-203ENST00000357395 DNAH1Q9P2D7 4330 aa2.38□□□□□ -2.03
SYNE2-203ENST00000357395 FBN3Q75N90 2809 aa2.37□□□□□ -2.03
SYNE2-203ENST00000357395 KRTAP10-8P60410 259 aa2.36□□□□□ -2.03
SYNE2-203ENST00000357395 ZNF469Q96JG9 3925 aaPredicted RBP2.35□□□□□ -2.03
SYNE2-203ENST00000357395 KRTAP10-2P60368 255 aa2.35□□□□□ -2.03
SYNE2-203ENST00000357395 DNAH7Q8WXX0 4024 aa2.34□□□□□ -2.03
SYNE2-203ENST00000357395 KRTAP12-1P59990 96 aa2.33□□□□□ -2.04
SYNE2-203ENST00000357395 KRTAP1-4P0C5Y4 121 aa2.32□□□□□ -2.04
SYNE2-203ENST00000357395 HUWE1Q7Z6Z7 4374 aaKnown RBP2.32□□□□□ -2.04
SYNE2-203ENST00000357395 FLGP20930 4061 aaPredicted RBP2.32□□□□□ -2.04
SYNE2-203ENST00000357395 HECTD4Q9Y4D8 3996 aa2.3□□□□□ -2.04
SYNE2-203ENST00000357395 DNAH6Q9C0G6 4158 aa2.29□□□□□ -2.04
SYNE2-203ENST00000357395 ZFHX4Q86UP3 3567 aa2.28□□□□□ -2.04
SYNE2-203ENST00000357395 LAMA5O15230 3695 aa2.27□□□□□ -2.05
SYNE2-203ENST00000357395 VPS13BQ7Z7G8 4022 aa2.27□□□□□ -2.05
SYNE2-203ENST00000357395 BSNQ9UPA5 3926 aa2.26□□□□□ -2.05
SYNE2-203ENST00000357395 MT3P25713 68 aa2.25□□□□□ -2.05
SYNE2-203ENST00000357395 KMT2AQ03164 3969 aa2.25□□□□□ -2.05
SYNE2-203ENST00000357395 SPENQ96T58 3664 aaKnown RBP2.25□□□□□ -2.05
SYNE2-203ENST00000357395 WDFY3Q8IZQ1 3526 aa2.24□□□□□ -2.05
SYNE2-203ENST00000357395 MUC3AQ02505 3323 aa2.24□□□□□ -2.05
SYNE2-203ENST00000357395 SPTBN5Q9NRC6 3674 aaKnown RBP2.24□□□□□ -2.05
SYNE2-203ENST00000357395 ASPMQ8IZT6 3477 aa2.23□□□□□ -2.05
SYNE2-203ENST00000357395 KRTAP10-6P60371 365 aaPredicted RBP2.22□□□□□ -2.05
SYNE2-203ENST00000357395 DNAH10Q8IVF4 4471 aa2.22□□□□□ -2.05
SYNE2-203ENST00000357395 VPS13CQ709C8 3753 aa2.22□□□□□ -2.05
SYNE2-203ENST00000357395 PRKDCP78527 4128 aaKnown RBP2.2□□□□□ -2.06
SYNE2-203ENST00000357395 DMDP11532 3685 aa2.2□□□□□ -2.06
SYNE2-203ENST00000357395 DNAH2Q9P225 4427 aa2.2□□□□□ -2.06
SYNE2-203ENST00000357395 DNAH11Q96DT5 4516 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms