RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 FAM236CP0DP71 79 aa8.03□□□□□ -1.12
LSS-201ENST00000356396 TYMSOSQ8TAI1 123 aa8.03□□□□□ -1.12
LSS-201ENST00000356396 CASC2Q6XLA1 102 aa8.02□□□□□ -1.13
LSS-201ENST00000356396 H7BZZ5 65 aa8.01□□□□□ -1.13
LSS-201ENST00000356396 OCR1Q9BZK8 76 aa8.01□□□□□ -1.13
LSS-201ENST00000356396 TRAV7A0A075B6U4 112 aa7.99□□□□□ -1.13
LSS-201ENST00000356396 A8MWP4 228 aa7.99□□□□□ -1.13
LSS-201ENST00000356396 LINC00336Q6ZUF6 198 aa7.98□□□□□ -1.13
LSS-201ENST00000356396 TMEM254Q8TBM7 123 aa7.98□□□□□ -1.13
LSS-201ENST00000356396 MMP24-AS1A0A0U1RRL7 71 aa7.97□□□□□ -1.13
LSS-201ENST00000356396 ABCA13Q86UQ4 5058 aa7.96□□□□□ -1.13
LSS-201ENST00000356396 C9orf92A6NGG3 77 aa7.96□□□□□ -1.14
LSS-201ENST00000356396 CDK2AP2O75956 126 aa7.95□□□□□ -1.14
LSS-201ENST00000356396 KLKP1Q107X0 134 aa7.95□□□□□ -1.14
LSS-201ENST00000356396 LINC00208Q96KT6 92 aa7.95□□□□□ -1.14
LSS-201ENST00000356396 hDV103S1A0JD37 113 aa7.95□□□□□ -1.14
LSS-201ENST00000356396 SERP1Q9Y6X1 66 aa7.95□□□□□ -1.14
LSS-201ENST00000356396 KRTAP10-4P60372 401 aaPredicted RBP7.94□□□□□ -1.14
LSS-201ENST00000356396 PCOTHQ58A44 107 aa7.94□□□□□ -1.14
LSS-201ENST00000356396 NDUFB1O75438 58 aa7.93□□□□□ -1.14
LSS-201ENST00000356396 C1orf195Q5TG92 126 aa7.93□□□□□ -1.14
LSS-201ENST00000356396 Q5VSD8 79 aa7.92□□□□□ -1.14
LSS-201ENST00000356396 C8orf17Q9NRJ1 99 aa7.92□□□□□ -1.14
LSS-201ENST00000356396 KRTAP4-5Q9BYR2 181 aa7.92□□□□□ -1.14
LSS-201ENST00000356396 KRTAP29-1A8MX34 341 aaPredicted RBP7.91□□□□□ -1.14
LSS-201ENST00000356396 C4orf48Q5BLP8 95 aa7.91□□□□□ -1.14
LSS-201ENST00000356396 A0A1B0GVX0 72 aa7.9□□□□□ -1.14
LSS-201ENST00000356396 FP248Q71RG6 208 aaPredicted RBP7.89□□□□□ -1.15
LSS-201ENST00000356396 LPAP08519 4548 aa7.89□□□□□ -1.15
LSS-201ENST00000356396 Q5W150 140 aa7.89□□□□□ -1.15
LSS-201ENST00000356396 SSBP3-AS1Q7Z2R9 100 aa7.87□□□□□ -1.15
LSS-201ENST00000356396 H0Y9P7 68 aa7.86□□□□□ -1.15
LSS-201ENST00000356396 TNXBP22105 4242 aa7.86□□□□□ -1.15
LSS-201ENST00000356396 LINC00304Q8N9R0 145 aa7.86□□□□□ -1.15
LSS-201ENST00000356396 SMIM26A0A096LP01 95 aa7.85□□□□□ -1.15
LSS-201ENST00000356396 A0A1B0GW54 56 aa7.85□□□□□ -1.15
LSS-201ENST00000356396 Q8N1X5 172 aa7.85□□□□□ -1.15
LSS-201ENST00000356396 A0A0U1RQV1 116 aa7.83□□□□□ -1.16
LSS-201ENST00000356396 PRO0628Q9UI54 55 aa7.83□□□□□ -1.16
LSS-201ENST00000356396 NDUFC1O43677 76 aa7.82□□□□□ -1.16
LSS-201ENST00000356396 FAM229AH3BQW9 127 aa7.81□□□□□ -1.16
LSS-201ENST00000356396 FAM229BQ4G0N7 80 aa7.8□□□□□ -1.16
LSS-201ENST00000356396 C1orf64Q8NEQ6 169 aa7.8□□□□□ -1.16
LSS-201ENST00000356396 MRPL34Q9BQ48 92 aaKnown RBP7.8□□□□□ -1.16
LSS-201ENST00000356396 LINC00313P59037 77 aa7.79□□□□□ -1.16
LSS-201ENST00000356396 LRP2P98164 4655 aa7.78□□□□□ -1.16
LSS-201ENST00000356396 MPLKIPQ8TAP9 179 aa7.77□□□□□ -1.17
LSS-201ENST00000356396 ATP5EP56381 51 aaPredicted RBP7.76□□□□□ -1.17
LSS-201ENST00000356396 Q8N9P0 234 aaPredicted RBP7.76□□□□□ -1.17
LSS-201ENST00000356396 V9GYY9 64 aa7.76□□□□□ -1.17
LSS-201ENST00000356396 TRAV22A0A0B4J277 110 aa7.75□□□□□ -1.17
LSS-201ENST00000356396 HERC2O95714 4834 aa7.75□□□□□ -1.17
LSS-201ENST00000356396 MP68P56378 58 aa7.74□□□□□ -1.17
LSS-201ENST00000356396 BRK1Q8WUW1 75 aa7.74□□□□□ -1.17
LSS-201ENST00000356396 IGKV2D-30A0A075B6S6 120 aa7.73□□□□□ -1.17
LSS-201ENST00000356396 IGKV2-30P06310 120 aa7.73□□□□□ -1.17
LSS-201ENST00000356396 MUC2Q02817 5179 aa7.73□□□□□ -1.17
LSS-201ENST00000356396 SPINK1P00995 79 aa7.7□□□□□ -1.18
LSS-201ENST00000356396 CD164Q04900 197 aa7.7□□□□□ -1.18
LSS-201ENST00000356396 HERC1Q15751 4861 aa7.69□□□□□ -1.18
LSS-201ENST00000356396 ZCCHC13Q8WW36 166 aaKnown RBP7.68□□□□□ -1.18
LSS-201ENST00000356396 LIMD2Q9BT23 127 aa7.68□□□□□ -1.18
LSS-201ENST00000356396 KRTAP16-1A8MUX0 517 aa7.66□□□□□ -1.18
LSS-201ENST00000356396 ASB16-AS1Q495Z4 193 aa7.65□□□□□ -1.18
LSS-201ENST00000356396 PCLOQ9Y6V0 5065 aa7.65□□□□□ -1.19
LSS-201ENST00000356396 MT1HL1P0DM35 61 aa7.57□□□□□ -1.2
LSS-201ENST00000356396 KRTAP10-8P60410 259 aa7.56□□□□□ -1.2
LSS-201ENST00000356396 KRTAP13-3Q3SY46 172 aa7.55□□□□□ -1.2
LSS-201ENST00000356396 CYP4F30PQ9H0H9 118 aa7.54□□□□□ -1.2
LSS-201ENST00000356396 HRES1P13985 223 aa7.53□□□□□ -1.2
LSS-201ENST00000356396 PSPHP1O15172 72 aa7.53□□□□□ -1.2
LSS-201ENST00000356396 TP53AIP1Q9HCN2 124 aa7.53□□□□□ -1.2
LSS-201ENST00000356396 C8orf87E5RJ46 101 aa7.52□□□□□ -1.21
LSS-201ENST00000356396 Q1T7F1 81 aa7.52□□□□□ -1.21
LSS-201ENST00000356396 SPAG11AQ6PDA7 123 aa7.5□□□□□ -1.21
LSS-201ENST00000356396 IGLV7-46A0A075B6I9 117 aa7.48□□□□□ -1.21
LSS-201ENST00000356396 BIRC6Q9NR09 4857 aa7.48□□□□□ -1.21
LSS-201ENST00000356396 H3BS24 57 aa7.47□□□□□ -1.21
LSS-201ENST00000356396 COA5Q86WW8 74 aa7.46□□□□□ -1.22
LSS-201ENST00000356396 RNF213Q63HN8 5207 aa7.45□□□□□ -1.22
LSS-201ENST00000356396 A8MUN3 132 aa7.43□□□□□ -1.22
LSS-201ENST00000356396 A8MU10 97 aa7.42□□□□□ -1.22
LSS-201ENST00000356396 LOC101927531A0A1B0GV80 90 aa7.4□□□□□ -1.23
LSS-201ENST00000356396 SPINK7P58062 85 aa7.39□□□□□ -1.23
LSS-201ENST00000356396 PMAIP1Q13794 54 aa7.39□□□□□ -1.23
LSS-201ENST00000356396 C7orf65Q6ZTY9 151 aa7.39□□□□□ -1.23
LSS-201ENST00000356396 J3QL48 77 aa7.37□□□□□ -1.23
LSS-201ENST00000356396 XP32Q5T750 250 aa7.37□□□□□ -1.23
LSS-201ENST00000356396 Q5VV11 94 aa7.37□□□□□ -1.23
LSS-201ENST00000356396 H3BPC8 53 aa7.35□□□□□ -1.23
LSS-201ENST00000356396 UBR4Q5T4S7 5183 aa7.33□□□□□ -1.24
LSS-201ENST00000356396 A8MUU9 505 aa7.32□□□□□ -1.24
LSS-201ENST00000356396 RPS29P62273 56 aaKnown RBP7.32□□□□□ -1.24
LSS-201ENST00000356396 FAT4Q6V0I7 4981 aa7.32□□□□□ -1.24
LSS-201ENST00000356396 SPANXA2-OT1Q8N9U9 137 aa7.32□□□□□ -1.24
LSS-201ENST00000356396 C20orf166-AS1Q96NR2 134 aa7.32□□□□□ -1.24
LSS-201ENST00000356396 CHKB-CPT1BH3BT56 60 aa7.31□□□□□ -1.24
LSS-201ENST00000356396 PRR15LQ9BU68 103 aa7.3□□□□□ -1.24
LSS-201ENST00000356396 ATP11AUNQ6ZP68 121 aa7.29□□□□□ -1.24
LSS-201ENST00000356396 KRTAP3-1Q9BYR8 98 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms