RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 ZNF469Q96JG9 3925 aaPredicted RBP4.39□□□□□ -1.71
CCR9-201ENST00000355983 PANO1I0J062 215 aa4.39□□□□□ -1.71
CCR9-201ENST00000355983 Q6ZSA8 131 aa4.39□□□□□ -1.71
CCR9-201ENST00000355983 CCDC168Q8NDH2 2452 aa4.38□□□□□ -1.71
CCR9-201ENST00000355983 PDZD2O15018 2839 aa4.38□□□□□ -1.71
CCR9-201ENST00000355983 FLNAP21333 2647 aaKnown RBP4.37□□□□□ -1.71
CCR9-201ENST00000355983 KRTAP10-11P60412 298 aa4.37□□□□□ -1.71
CCR9-201ENST00000355983 VWFP04275 2813 aa4.37□□□□□ -1.71
CCR9-201ENST00000355983 SSBP3-AS1Q7Z2R9 100 aa4.37□□□□□ -1.71
CCR9-201ENST00000355983 SPACA4Q8TDM5 124 aa4.37□□□□□ -1.71
CCR9-201ENST00000355983 KRTAP16-1A8MUX0 517 aa4.36□□□□□ -1.71
CCR9-201ENST00000355983 SRRM2Q9UQ35 2752 aaKnown RBP4.36□□□□□ -1.71
CCR9-201ENST00000355983 KRTAP1-5Q9BYS1 174 aa4.36□□□□□ -1.71
CCR9-201ENST00000355983 SPINK6Q6UWN8 80 aa4.35□□□□□ -1.71
CCR9-201ENST00000355983 PKD1L1Q8TDX9 2849 aa4.34□□□□□ -1.71
CCR9-201ENST00000355983 K7ERS5 55 aa4.34□□□□□ -1.72
CCR9-201ENST00000355983 A0A1B0GU33 70 aa4.33□□□□□ -1.72
CCR9-201ENST00000355983 NUPR2A6NF83 97 aa4.33□□□□□ -1.72
CCR9-201ENST00000355983 H1FX-AS1Q4G0G2 97 aa4.32□□□□□ -1.72
CCR9-201ENST00000355983 ANK2Q01484 3957 aa4.32□□□□□ -1.72
CCR9-201ENST00000355983 ACANP16112 2415 aa4.31□□□□□ -1.72
CCR9-201ENST00000355983 PSORS1C2Q9UIG4 136 aa4.3□□□□□ -1.72
CCR9-201ENST00000355983 TRRAPQ9Y4A5 3859 aa4.29□□□□□ -1.72
CCR9-201ENST00000355983 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.28□□□□□ -1.72
CCR9-201ENST00000355983 NOTCH2Q04721 2471 aa4.28□□□□□ -1.72
CCR9-201ENST00000355983 A0A087WTM6 91 aa4.28□□□□□ -1.72
CCR9-201ENST00000355983 ITPR2Q14571 2701 aa4.28□□□□□ -1.73
CCR9-201ENST00000355983 DNAH10Q8IVF4 4471 aa4.27□□□□□ -1.73
CCR9-201ENST00000355983 CIRBP-AS1Q8TBR5 109 aa4.27□□□□□ -1.73
CCR9-201ENST00000355983 HECTD1Q9ULT8 2610 aa4.27□□□□□ -1.73
CCR9-201ENST00000355983 TENM3Q9P273 2699 aa4.27□□□□□ -1.73
CCR9-201ENST00000355983 DNAH3Q8TD57 4116 aa4.27□□□□□ -1.73
CCR9-201ENST00000355983 C20orf166-AS1Q96NR2 134 aa4.27□□□□□ -1.73
CCR9-201ENST00000355983 Q6ZRN7 208 aaPredicted RBP4.26□□□□□ -1.73
CCR9-201ENST00000355983 FBN1P35555 2871 aaKnown RBP4.26□□□□□ -1.73
CCR9-201ENST00000355983 DNAH8Q96JB1 4490 aa4.26□□□□□ -1.73
CCR9-201ENST00000355983 KRTAP15-1Q3LI76 137 aa4.26□□□□□ -1.73
CCR9-201ENST00000355983 LYSTQ99698 3801 aa4.24□□□□□ -1.73
CCR9-201ENST00000355983 SPINK1P00995 79 aa4.24□□□□□ -1.73
CCR9-201ENST00000355983 TYMSOSQ8TAI1 123 aa4.24□□□□□ -1.73
CCR9-201ENST00000355983 UBE2DNLQ8IWF7 75 aa4.24□□□□□ -1.73
CCR9-201ENST00000355983 SMR3AQ99954 134 aa4.24□□□□□ -1.73
CCR9-201ENST00000355983 APLNQ9ULZ1 77 aa4.24□□□□□ -1.73
CCR9-201ENST00000355983 TENM1Q9UKZ4 2725 aa4.24□□□□□ -1.73
CCR9-201ENST00000355983 TEP1Q99973 2627 aaKnown RBP4.23□□□□□ -1.73
CCR9-201ENST00000355983 DNAH9Q9NYC9 4486 aa4.23□□□□□ -1.73
CCR9-201ENST00000355983 SPINT4Q6UDR6 99 aa4.22□□□□□ -1.73
CCR9-201ENST00000355983 NBDYA0A0U1RRE5 68 aa4.22□□□□□ -1.73
CCR9-201ENST00000355983 COX6B2Q6YFQ2 88 aa4.22□□□□□ -1.73
CCR9-201ENST00000355983 DYNC2H1Q8NCM8 4307 aaKnown RBP4.21□□□□□ -1.74
CCR9-201ENST00000355983 FRAS1Q86XX4 4008 aa4.21□□□□□ -1.74
CCR9-201ENST00000355983 Q8N1X5 172 aa4.2□□□□□ -1.74
CCR9-201ENST00000355983 SEC61BP60468 96 aaKnown RBP4.2□□□□□ -1.74
CCR9-201ENST00000355983 NDUFAF8A1L188 74 aa4.19□□□□□ -1.74
CCR9-201ENST00000355983 VPS13DQ5THJ4 4388 aa4.19□□□□□ -1.74
CCR9-201ENST00000355983 CSMD3Q7Z407 3707 aa4.18□□□□□ -1.74
CCR9-201ENST00000355983 TPRXLQ17RH7 258 aa4.18□□□□□ -1.74
CCR9-201ENST00000355983 HUWE1Q7Z6Z7 4374 aaKnown RBP4.18□□□□□ -1.74
CCR9-201ENST00000355983 RPL37P61927 97 aaKnown RBP4.17□□□□□ -1.74
CCR9-201ENST00000355983 CMYA5Q8N3K9 4069 aa4.17□□□□□ -1.74
CCR9-201ENST00000355983 CRIPTQ9P021 101 aa4.17□□□□□ -1.74
CCR9-201ENST00000355983 NSD1Q96L73 2696 aaPredicted RBP4.16□□□□□ -1.74
CCR9-201ENST00000355983 ATRQ13535 2644 aa4.16□□□□□ -1.74
CCR9-201ENST00000355983 MEGF8Q7Z7M0 2845 aa4.15□□□□□ -1.74
CCR9-201ENST00000355983 KRTAP13-2Q52LG2 175 aa4.15□□□□□ -1.75
CCR9-201ENST00000355983 KRTAP3-1Q9BYR8 98 aa4.13□□□□□ -1.75
CCR9-201ENST00000355983 DNAH17Q9UFH2 4485 aa4.13□□□□□ -1.75
CCR9-201ENST00000355983 RPS29P62273 56 aaKnown RBP4.11□□□□□ -1.75
CCR9-201ENST00000355983 COL7A1Q02388 2944 aa4.11□□□□□ -1.75
CCR9-201ENST00000355983 PRKDCP78527 4128 aaKnown RBP4.11□□□□□ -1.75
CCR9-201ENST00000355983 KRTAP24-1Q3LI83 254 aa4.11□□□□□ -1.75
CCR9-201ENST00000355983 DNAH7Q8WXX0 4024 aa4.11□□□□□ -1.75
CCR9-201ENST00000355983 NBEAL1Q6ZS30 2694 aa4.1□□□□□ -1.75
CCR9-201ENST00000355983 HECTD4Q9Y4D8 3996 aa4.1□□□□□ -1.75
CCR9-201ENST00000355983 KRTAP9-6A0A140TA67 174 aa4.09□□□□□ -1.75
CCR9-201ENST00000355983 FLG2Q5D862 2391 aaPredicted RBP4.09□□□□□ -1.75
CCR9-201ENST00000355983 LUZP6Q538Z0 58 aa4.09□□□□□ -1.75
CCR9-201ENST00000355983 KRTAP10-6P60371 365 aaPredicted RBP4.05□□□□□ -1.76
CCR9-201ENST00000355983 DNAH6Q9C0G6 4158 aa4.05□□□□□ -1.76
CCR9-201ENST00000355983 KRTAP1-4P0C5Y4 121 aa4.05□□□□□ -1.76
CCR9-201ENST00000355983 TGP01266 2768 aa4.04□□□□□ -1.76
CCR9-201ENST00000355983 C10orf95Q9H7T3 257 aa4.01□□□□□ -1.77
CCR9-201ENST00000355983 NOTCH1P46531 2555 aa4.01□□□□□ -1.77
CCR9-201ENST00000355983 XP32Q5T750 250 aa4.01□□□□□ -1.77
CCR9-201ENST00000355983 KRTAP13-4Q3LI77 160 aa4□□□□□ -1.77
CCR9-201ENST00000355983 STAB1Q9NY15 2570 aa4□□□□□ -1.77
CCR9-201ENST00000355983 KRTAP3-2Q9BYR7 98 aa3.99□□□□□ -1.77
CCR9-201ENST00000355983 S4R3F8 94 aa3.99□□□□□ -1.77
CCR9-201ENST00000355983 PLECQ15149 4684 aaKnown RBP3.99□□□□□ -1.77
CCR9-201ENST00000355983 DNAH2Q9P225 4427 aa3.99□□□□□ -1.77
CCR9-201ENST00000355983 DNAH11Q96DT5 4516 aa3.97□□□□□ -1.77
CCR9-201ENST00000355983 COL6A5A8TX70 2615 aa3.97□□□□□ -1.77
CCR9-201ENST00000355983 DNHD1Q96M86 4753 aa3.96□□□□□ -1.78
CCR9-201ENST00000355983 LCE2DQ5TA82 110 aaPredicted RBP3.95□□□□□ -1.78
CCR9-201ENST00000355983 KRTAP3-3Q9BYR6 98 aa3.95□□□□□ -1.78
CCR9-201ENST00000355983 A0A0D9SG42 100 aa3.94□□□□□ -1.78
CCR9-201ENST00000355983 STAB2Q8WWQ8 2551 aa3.94□□□□□ -1.78
CCR9-201ENST00000355983 SACSQ9NZJ4 4579 aa3.92□□□□□ -1.78
CCR9-201ENST00000355983 KRTAP12-1P59990 96 aa3.91□□□□□ -1.78
CCR9-201ENST00000355983 KRTAP12-2P59991 146 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms