RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 C20orf197Q8N268 126 aa7.88□□□□□ -1.15
HOXA1-202ENST00000355633 LINC00304Q8N9R0 145 aa7.88□□□□□ -1.15
HOXA1-202ENST00000355633 BRK1Q8WUW1 75 aa7.88□□□□□ -1.15
HOXA1-202ENST00000355633 H7BZZ5 65 aa7.88□□□□□ -1.15
HOXA1-202ENST00000355633 SPINK1P00995 79 aa7.87□□□□□ -1.15
HOXA1-202ENST00000355633 FP248Q71RG6 208 aaPredicted RBP7.87□□□□□ -1.15
HOXA1-202ENST00000355633 NDUFC1O43677 76 aa7.86□□□□□ -1.15
HOXA1-202ENST00000355633 DSCR10P59022 87 aa7.86□□□□□ -1.15
HOXA1-202ENST00000355633 Q96NJ1 140 aa7.86□□□□□ -1.15
HOXA1-202ENST00000355633 KLKP1Q107X0 134 aa7.86□□□□□ -1.15
HOXA1-202ENST00000355633 SPAG11AQ6PDA7 123 aa7.86□□□□□ -1.15
HOXA1-202ENST00000355633 LIMD2Q9BT23 127 aa7.86□□□□□ -1.15
HOXA1-202ENST00000355633 TRAV7A0A075B6U4 112 aa7.85□□□□□ -1.15
HOXA1-202ENST00000355633 Q8N9L7 120 aa7.85□□□□□ -1.15
HOXA1-202ENST00000355633 ASB16-AS1Q495Z4 193 aa7.85□□□□□ -1.15
HOXA1-202ENST00000355633 IGKV4-1P06312 121 aa7.84□□□□□ -1.15
HOXA1-202ENST00000355633 A0A0U1RQV1 116 aa7.83□□□□□ -1.16
HOXA1-202ENST00000355633 K7EQZ3 153 aa7.83□□□□□ -1.16
HOXA1-202ENST00000355633 RPS29P62273 56 aaKnown RBP7.82□□□□□ -1.16
HOXA1-202ENST00000355633 A8MWP4 228 aa7.81□□□□□ -1.16
HOXA1-202ENST00000355633 KRTAP10-8P60410 259 aa7.81□□□□□ -1.16
HOXA1-202ENST00000355633 PMAIP1Q13794 54 aa7.79□□□□□ -1.16
HOXA1-202ENST00000355633 KRTAP4-5Q9BYR2 181 aa7.79□□□□□ -1.16
HOXA1-202ENST00000355633 NDUFB1O75438 58 aa7.78□□□□□ -1.16
HOXA1-202ENST00000355633 PRR15Q8IV56 129 aa7.78□□□□□ -1.16
HOXA1-202ENST00000355633 KRTAP3-3Q9BYR6 98 aa7.77□□□□□ -1.17
HOXA1-202ENST00000355633 KRTAP3-2Q9BYR7 98 aa7.77□□□□□ -1.17
HOXA1-202ENST00000355633 LRP1Q07954 4544 aaKnown RBP7.75□□□□□ -1.17
HOXA1-202ENST00000355633 BIRC6Q9NR09 4857 aa7.74□□□□□ -1.17
HOXA1-202ENST00000355633 FLG2Q5D862 2391 aaPredicted RBP7.74□□□□□ -1.17
HOXA1-202ENST00000355633 A0A1B0GVX0 72 aa7.74□□□□□ -1.17
HOXA1-202ENST00000355633 IGHV6-1A0A0B4J1U7 121 aa7.72□□□□□ -1.17
HOXA1-202ENST00000355633 HCG22E2RYF7 251 aa7.72□□□□□ -1.17
HOXA1-202ENST00000355633 MT1HL1P0DM35 61 aa7.72□□□□□ -1.17
HOXA1-202ENST00000355633 FAT3Q8TDW7 4589 aa7.71□□□□□ -1.17
HOXA1-202ENST00000355633 TNXBP22105 4242 aa7.7□□□□□ -1.18
HOXA1-202ENST00000355633 WFDC13Q8IUB5 93 aa7.69□□□□□ -1.18
HOXA1-202ENST00000355633 C8orf17Q9NRJ1 99 aa7.69□□□□□ -1.18
HOXA1-202ENST00000355633 MMP24-AS1A0A0U1RRL7 71 aa7.68□□□□□ -1.18
HOXA1-202ENST00000355633 SNURFQ9Y675 71 aa7.68□□□□□ -1.18
HOXA1-202ENST00000355633 CASC2Q6XLA1 102 aa7.67□□□□□ -1.18
HOXA1-202ENST00000355633 KRTAP29-1A8MX34 341 aaPredicted RBP7.66□□□□□ -1.18
HOXA1-202ENST00000355633 NOTCH2NLQ7Z3S9 236 aa7.66□□□□□ -1.18
HOXA1-202ENST00000355633 RETNLBQ9BQ08 111 aa7.66□□□□□ -1.18
HOXA1-202ENST00000355633 hDV103S1A0JD37 113 aa7.65□□□□□ -1.18
HOXA1-202ENST00000355633 C8orf87E5RJ46 101 aa7.65□□□□□ -1.18
HOXA1-202ENST00000355633 MPLKIPQ8TAP9 179 aa7.65□□□□□ -1.18
HOXA1-202ENST00000355633 MYCBP2O75592 4640 aa7.64□□□□□ -1.19
HOXA1-202ENST00000355633 HERC2O95714 4834 aa7.63□□□□□ -1.19
HOXA1-202ENST00000355633 LINC00313P59037 77 aa7.63□□□□□ -1.19
HOXA1-202ENST00000355633 TMEM254Q8TBM7 123 aa7.6□□□□□ -1.19
HOXA1-202ENST00000355633 MRPL34Q9BQ48 92 aaKnown RBP7.59□□□□□ -1.19
HOXA1-202ENST00000355633 DMBT1Q9UGM3 2413 aaPredicted RBP7.59□□□□□ -1.19
HOXA1-202ENST00000355633 OCR1Q9BZK8 76 aa7.59□□□□□ -1.19
HOXA1-202ENST00000355633 Q1T7F1 81 aa7.58□□□□□ -1.2
HOXA1-202ENST00000355633 J3QL48 77 aa7.56□□□□□ -1.2
HOXA1-202ENST00000355633 ABCA13Q86UQ4 5058 aa7.55□□□□□ -1.2
HOXA1-202ENST00000355633 KRTAP16-1A8MUX0 517 aa7.54□□□□□ -1.2
HOXA1-202ENST00000355633 NDUFS5O43920 106 aa7.54□□□□□ -1.2
HOXA1-202ENST00000355633 C9orf92A6NGG3 77 aa7.52□□□□□ -1.2
HOXA1-202ENST00000355633 TP53AIP1Q9HCN2 124 aa7.51□□□□□ -1.21
HOXA1-202ENST00000355633 IGLV7-46A0A075B6I9 117 aa7.51□□□□□ -1.21
HOXA1-202ENST00000355633 Q8N9P0 234 aaPredicted RBP7.51□□□□□ -1.21
HOXA1-202ENST00000355633 KTN1-AS1Q86SY8 53 aa7.5□□□□□ -1.21
HOXA1-202ENST00000355633 PRR4Q16378 134 aa7.48□□□□□ -1.21
HOXA1-202ENST00000355633 TRAV22A0A0B4J277 110 aa7.44□□□□□ -1.22
HOXA1-202ENST00000355633 RBM12B-AS1Q9P1G2 102 aa7.44□□□□□ -1.22
HOXA1-202ENST00000355633 H0Y9P7 68 aa7.44□□□□□ -1.22
HOXA1-202ENST00000355633 MP68P56378 58 aa7.43□□□□□ -1.22
HOXA1-202ENST00000355633 KRTAP13-3Q3SY46 172 aa7.43□□□□□ -1.22
HOXA1-202ENST00000355633 C20orf166-AS1Q96NR2 134 aa7.42□□□□□ -1.22
HOXA1-202ENST00000355633 A8MUU9 505 aa7.41□□□□□ -1.22
HOXA1-202ENST00000355633 Q5W150 140 aa7.4□□□□□ -1.23
HOXA1-202ENST00000355633 C1orf64Q8NEQ6 169 aa7.39□□□□□ -1.23
HOXA1-202ENST00000355633 LINC00208Q96KT6 92 aa7.39□□□□□ -1.23
HOXA1-202ENST00000355633 CYP4F30PQ9H0H9 118 aa7.39□□□□□ -1.23
HOXA1-202ENST00000355633 H3BPC8 53 aa7.38□□□□□ -1.23
HOXA1-202ENST00000355633 PSPHP1O15172 72 aa7.38□□□□□ -1.23
HOXA1-202ENST00000355633 TPRXLQ17RH7 258 aa7.37□□□□□ -1.23
HOXA1-202ENST00000355633 Q75L30 129 aa7.37□□□□□ -1.23
HOXA1-202ENST00000355633 XP32Q5T750 250 aa7.36□□□□□ -1.23
HOXA1-202ENST00000355633 ATP11AUNQ6ZP68 121 aa7.35□□□□□ -1.23
HOXA1-202ENST00000355633 ZCCHC13Q8WW36 166 aaKnown RBP7.35□□□□□ -1.23
HOXA1-202ENST00000355633 PCLOQ9Y6V0 5065 aa7.33□□□□□ -1.24
HOXA1-202ENST00000355633 RPL37P61927 97 aaKnown RBP7.32□□□□□ -1.24
HOXA1-202ENST00000355633 A8MUN3 132 aa7.31□□□□□ -1.24
HOXA1-202ENST00000355633 Q5VV11 94 aa7.31□□□□□ -1.24
HOXA1-202ENST00000355633 LOC101927531A0A1B0GV80 90 aa7.3□□□□□ -1.24
HOXA1-202ENST00000355633 C7orf65Q6ZTY9 151 aa7.28□□□□□ -1.24
HOXA1-202ENST00000355633 CHKB-CPT1BH3BT56 60 aa7.27□□□□□ -1.25
HOXA1-202ENST00000355633 IGKV2-30P06310 120 aa7.27□□□□□ -1.25
HOXA1-202ENST00000355633 A6NN06 94 aa7.27□□□□□ -1.25
HOXA1-202ENST00000355633 IGKV2D-30A0A075B6S6 120 aa7.25□□□□□ -1.25
HOXA1-202ENST00000355633 LCA10Q71F78 164 aa7.25□□□□□ -1.25
HOXA1-202ENST00000355633 PCOTHQ58A44 107 aa7.24□□□□□ -1.25
HOXA1-202ENST00000355633 SPTSSBQ8NFR3 76 aa7.24□□□□□ -1.25
HOXA1-202ENST00000355633 LPAP08519 4548 aa7.22□□□□□ -1.25
HOXA1-202ENST00000355633 LOC100996750A0A140TA64 210 aa7.22□□□□□ -1.25
HOXA1-202ENST00000355633 KRTAP4-6Q9BYQ5 205 aa7.22□□□□□ -1.25
HOXA1-202ENST00000355633 PRR15LQ9BU68 103 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms