RNA–Protein interactions for RNA: ENST00000354325.2

TRERF1-202, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,138 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-202ENST00000354325 VPS13CQ709C8 3753 aa7.33□□□□□ -1.24
TRERF1-202ENST00000354325 CIRBP-AS1Q8TBR5 109 aa7.31□□□□□ -1.24
TRERF1-202ENST00000354325 SPACA4Q8TDM5 124 aa7.31□□□□□ -1.24
TRERF1-202ENST00000354325 KRTAP1-5Q9BYS1 174 aa7.31□□□□□ -1.24
TRERF1-202ENST00000354325 RTL8CO15255 209 aa7.29□□□□□ -1.24
TRERF1-202ENST00000354325 Q5W150 140 aa7.29□□□□□ -1.24
TRERF1-202ENST00000354325 APLNQ9ULZ1 77 aa7.29□□□□□ -1.24
TRERF1-202ENST00000354325 IGKV2-30P06310 120 aa7.27□□□□□ -1.25
TRERF1-202ENST00000354325 PSORS1C2Q9UIG4 136 aa7.26□□□□□ -1.25
TRERF1-202ENST00000354325 AKAP9Q99996 3911 aa7.25□□□□□ -1.25
TRERF1-202ENST00000354325 NOTCH2NLQ7Z3S9 236 aa7.25□□□□□ -1.25
TRERF1-202ENST00000354325 KRTAP13-3Q3SY46 172 aa7.24□□□□□ -1.25
TRERF1-202ENST00000354325 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.22□□□□□ -1.25
TRERF1-202ENST00000354325 PKD1L1Q8TDX9 2849 aa7.21□□□□□ -1.25
TRERF1-202ENST00000354325 IGKV2D-30A0A075B6S6 120 aa7.2□□□□□ -1.26
TRERF1-202ENST00000354325 A0A087WTM6 91 aa7.2□□□□□ -1.26
TRERF1-202ENST00000354325 H3BS24 57 aa7.2□□□□□ -1.26
TRERF1-202ENST00000354325 K7ERS5 55 aa7.2□□□□□ -1.26
TRERF1-202ENST00000354325 ANAPC11Q9NYG5 84 aa7.2□□□□□ -1.26
TRERF1-202ENST00000354325 CSAG1Q6PB30 78 aa7.19□□□□□ -1.26
TRERF1-202ENST00000354325 ADM2Q7Z4H4 148 aa7.19□□□□□ -1.26
TRERF1-202ENST00000354325 IGLV7-43P04211 117 aa7.19□□□□□ -1.26
TRERF1-202ENST00000354325 PANO1I0J062 215 aa7.17□□□□□ -1.26
TRERF1-202ENST00000354325 ANK3Q12955 4377 aaKnown RBP7.15□□□□□ -1.26
TRERF1-202ENST00000354325 TENM2Q9NT68 2774 aa7.14□□□□□ -1.27
TRERF1-202ENST00000354325 TRRAPQ9Y4A5 3859 aa7.12□□□□□ -1.27
TRERF1-202ENST00000354325 Q6ZRN7 208 aaPredicted RBP7.12□□□□□ -1.27
TRERF1-202ENST00000354325 SPINK1P00995 79 aa7.1□□□□□ -1.27
TRERF1-202ENST00000354325 SMR3BP02814 79 aaPredicted RBP7.08□□□□□ -1.28
TRERF1-202ENST00000354325 ZNF469Q96JG9 3925 aaPredicted RBP7.07□□□□□ -1.28
TRERF1-202ENST00000354325 TGP01266 2768 aa7.05□□□□□ -1.28
TRERF1-202ENST00000354325 KRTAP25-1Q3LHN0 102 aa7.01□□□□□ -1.29
TRERF1-202ENST00000354325 A0A1B0GU33 70 aa7□□□□□ -1.29
TRERF1-202ENST00000354325 TYMSOSQ8TAI1 123 aa6.98□□□□□ -1.29
TRERF1-202ENST00000354325 KRTAP16-1A8MUX0 517 aa6.95□□□□□ -1.3
TRERF1-202ENST00000354325 DMBT1Q9UGM3 2413 aaPredicted RBP6.95□□□□□ -1.3
TRERF1-202ENST00000354325 Q8N1X5 172 aa6.95□□□□□ -1.3
TRERF1-202ENST00000354325 A8MUU9 505 aa6.94□□□□□ -1.3
TRERF1-202ENST00000354325 ROMO1P60602 79 aa6.91□□□□□ -1.3
TRERF1-202ENST00000354325 H1FX-AS1Q4G0G2 97 aa6.91□□□□□ -1.3
TRERF1-202ENST00000354325 KRTAP10-2P60368 255 aa6.91□□□□□ -1.3
TRERF1-202ENST00000354325 Q6ZSA8 131 aa6.87□□□□□ -1.31
TRERF1-202ENST00000354325 LINC00304Q8N9R0 145 aa6.87□□□□□ -1.31
TRERF1-202ENST00000354325 FLG2Q5D862 2391 aaPredicted RBP6.87□□□□□ -1.31
TRERF1-202ENST00000354325 KRTAP13-2Q52LG2 175 aa6.86□□□□□ -1.31
TRERF1-202ENST00000354325 H0YAA0 97 aa6.84□□□□□ -1.31
TRERF1-202ENST00000354325 RPS29P62273 56 aaKnown RBP6.83□□□□□ -1.32
TRERF1-202ENST00000354325 SRRM2Q9UQ35 2752 aaKnown RBP6.83□□□□□ -1.32
TRERF1-202ENST00000354325 KRTAP10-1P60331 282 aa6.83□□□□□ -1.32
TRERF1-202ENST00000354325 C9orf92A6NGG3 77 aa6.81□□□□□ -1.32
TRERF1-202ENST00000354325 ALMS1Q8TCU4 4167 aa6.8□□□□□ -1.32
TRERF1-202ENST00000354325 DNAH1Q9P2D7 4330 aa6.77□□□□□ -1.33
TRERF1-202ENST00000354325 SPINT4Q6UDR6 99 aa6.77□□□□□ -1.33
TRERF1-202ENST00000354325 RPL37P61927 97 aaKnown RBP6.73□□□□□ -1.33
TRERF1-202ENST00000354325 COX6B2Q6YFQ2 88 aa6.7□□□□□ -1.34
TRERF1-202ENST00000354325 KRTAP1-4P0C5Y4 121 aa6.69□□□□□ -1.34
TRERF1-202ENST00000354325 C20orf166-AS1Q96NR2 134 aa6.69□□□□□ -1.34
TRERF1-202ENST00000354325 CRIPTQ9P021 101 aa6.68□□□□□ -1.34
TRERF1-202ENST00000354325 FBN3Q75N90 2809 aa6.68□□□□□ -1.34
TRERF1-202ENST00000354325 HUWE1Q7Z6Z7 4374 aaKnown RBP6.65□□□□□ -1.35
TRERF1-202ENST00000354325 COL7A1Q02388 2944 aa6.63□□□□□ -1.35
TRERF1-202ENST00000354325 CSMD3Q7Z407 3707 aa6.57□□□□□ -1.36
TRERF1-202ENST00000354325 MEGF8Q7Z7M0 2845 aa6.57□□□□□ -1.36
TRERF1-202ENST00000354325 DNAH10Q8IVF4 4471 aa6.56□□□□□ -1.36
TRERF1-202ENST00000354325 J3QL48 77 aa6.55□□□□□ -1.36
TRERF1-202ENST00000354325 A0A0D9SG42 100 aa6.54□□□□□ -1.36
TRERF1-202ENST00000354325 DNAH3Q8TD57 4116 aa6.54□□□□□ -1.36
TRERF1-202ENST00000354325 KRTAP3-1Q9BYR8 98 aa6.53□□□□□ -1.36
TRERF1-202ENST00000354325 Q5VSD8 79 aa6.51□□□□□ -1.37
TRERF1-202ENST00000354325 P0C880 135 aa6.5□□□□□ -1.37
TRERF1-202ENST00000354325 S4R3F8 94 aa6.47□□□□□ -1.37
TRERF1-202ENST00000354325 ANK2Q01484 3957 aa6.46□□□□□ -1.37
TRERF1-202ENST00000354325 KRTAP21-3Q3LHN1 58 aa6.45□□□□□ -1.38
TRERF1-202ENST00000354325 DNAH8Q96JB1 4490 aa6.45□□□□□ -1.38
TRERF1-202ENST00000354325 DNAH9Q9NYC9 4486 aa6.45□□□□□ -1.38
TRERF1-202ENST00000354325 NDUFAF8A1L188 74 aa6.43□□□□□ -1.38
TRERF1-202ENST00000354325 DYNC2H1Q8NCM8 4307 aaKnown RBP6.41□□□□□ -1.38
TRERF1-202ENST00000354325 TPRXLQ17RH7 258 aa6.39□□□□□ -1.39
TRERF1-202ENST00000354325 DNAH17Q9UFH2 4485 aa6.39□□□□□ -1.39
TRERF1-202ENST00000354325 CMYA5Q8N3K9 4069 aa6.37□□□□□ -1.39
TRERF1-202ENST00000354325 KRTAP10-6P60371 365 aaPredicted RBP6.36□□□□□ -1.39
TRERF1-202ENST00000354325 VPS13DQ5THJ4 4388 aa6.35□□□□□ -1.39
TRERF1-202ENST00000354325 M0QZ58 72 aa6.33□□□□□ -1.4
TRERF1-202ENST00000354325 KRTAP15-1Q3LI76 137 aa6.33□□□□□ -1.4
TRERF1-202ENST00000354325 PLECQ15149 4684 aaKnown RBP6.31□□□□□ -1.4
TRERF1-202ENST00000354325 C10orf95Q9H7T3 257 aa6.31□□□□□ -1.4
TRERF1-202ENST00000354325 KRTAP13-4Q3LI77 160 aa6.27□□□□□ -1.41
TRERF1-202ENST00000354325 LYSTQ99698 3801 aa6.25□□□□□ -1.41
TRERF1-202ENST00000354325 KRTAP3-2Q9BYR7 98 aa6.25□□□□□ -1.41
TRERF1-202ENST00000354325 KRTAP3-3Q9BYR6 98 aa6.23□□□□□ -1.41
TRERF1-202ENST00000354325 DNHD1Q96M86 4753 aa6.22□□□□□ -1.41
TRERF1-202ENST00000354325 HECTD4Q9Y4D8 3996 aa6.21□□□□□ -1.41
TRERF1-202ENST00000354325 KRTAP12-2P59991 146 aa6.19□□□□□ -1.42
TRERF1-202ENST00000354325 KRTAP12-1P59990 96 aa6.18□□□□□ -1.42
TRERF1-202ENST00000354325 XP32Q5T750 250 aa6.18□□□□□ -1.42
TRERF1-202ENST00000354325 DNAH2Q9P225 4427 aa6.18□□□□□ -1.42
TRERF1-202ENST00000354325 FRAS1Q86XX4 4008 aa6.18□□□□□ -1.42
TRERF1-202ENST00000354325 LUZP6Q538Z0 58 aa6.17□□□□□ -1.42
TRERF1-202ENST00000354325 A0A0A0MQY5 61 aa6.12□□□□□ -1.43
TRERF1-202ENST00000354325 DNAH11Q96DT5 4516 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms